BAC Information

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BAC

Clone NameB6Ng01-050I24
Chromosome19 (Build37)
Map Location 61,174,987 - 61,314,757
singlet/doubletdoublet
Overlap geneBC029127, LOC100043112, EG547091, LOC433261, EG633057, Csf2ra, LOC100043120
Upstream geneLOC100043093, D19Ertd737e, 4933412A08Rik, Prlhr, 2700078E11Rik, Nanos1, Eif3s10, 1810055E12Rik, Sfxn4, Prdx3, Gprk5, LOC671322
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-050I24.bB6Ng01-050I24.g
ACCDH874468DH874469
length163975
definitionDH874468|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I24, 5' end.DH874469|Mus musculus domesticus DNA, BAC clone: B6Ng01-050I24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,174,987 - 61,175,149)(61,313,786 - 61,314,757)
sequence
cactttttaataagcaacagatgtctgaccttcaactaggttgccttata
caggaaacatcaaaaacggaaaacttggttggaagataccttagaagttt
cttccagagcacccagattctattctgagtacatatgaaagctcatatct
ctctcctccccct
gaattcttgttacaatagacccttgagaagggcatctctgcaagcgtgct
ggtaggcataaatgaatgtgactctgttgtagaaagaagaagctaaaggg
cataggcaaaatggagaaggaaagctgtgtgtcccagatacctctctgag
ttctctgctgcaggtagcatggacaggcgataccaacatgactgaaagag
aaaaagggctgcatcagcaggtcatccacccaccccaccccacccccagc
gagggaagttggaagggatagctggggagatgctcacggtttccagattt
tcccagagagtatttggttcttcccaatttagagctaaaattactataag
taaatttctaacctgtgggcatcatgaagggaatttttggtgcatgtgac
tggcacagccattcgtaagacccaatgttaagacatgtagggccgagagc
ggtactctgtgcaggattaaaataatgtgcttctctctcagatccaatgt
tcctttctgtctgggagttcatcccggagctcatgtccatgactgaaggt
gaaattccttctttatctcctgctgtttcagtttagttttccctcccacc
catgtctcaggtctggaattagaggttttatttatccttttatgggataa
gaaaaaaagaggatgtgagaattcagtgcctacacttgaccactagagca
cacccatcctaactgatcatatggtaaacatgcagttagtggattcattt
attctaggccttgtgttgctctttgtgtttctcagcagtagtcctatttt
ctgtcaagttcttcaaaataattctccagaagccatgtttttcgggaaaa
agatattttattattaagattttttttgtttcatttatttcagacattac
catcttaatgtcaaacacagactcagtttaatctgtgtttaggtttcatg
ttcctatagtaattctatatattat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_61174987_61175149
seq2: B6Ng01-050I24.b_52_214

seq1  CACTTTTTAATAAGCAACAGATGTCTGACCTTCAACTAGGTTGCCTTATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTTAATAAGCAACAGATGTCTGACCTTCAACTAGGTTGCCTTATA  50

seq1  CAGGAAACATCAAAAACGGAAAACTTGGTTGGAAGATACCTTAGAAGTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAACATCAAAAACGGAAAACTTGGTTGGAAGATACCTTAGAAGTTT  100

seq1  CTTCCAGAGCACCCAGATTCTATTCTGAGTACATATGAAAGCTCATATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCAGAGCACCCAGATTCTATTCTGAGTACATATGAAAGCTCATATCT  150

seq1  CTCTCCTCCCCCT  163
      |||||||||||||
seq2  CTCTCCTCCCCCT  163

seq1: chr19_61313786_61314757
seq2: B6Ng01-050I24.g_70_1044 (reverse)

seq1  ATAATA---AGAATTACTATAGGAAACAATGAAAACCTAAAACACAGATT  47
      ||||||   ||||||||||||||||   ||| |||||| |||||||||||
seq2  ATAATATATAGAATTACTATAGGAA--CATG-AAACCT-AAACACAGATT  46

seq1  AAAACTGAGTCTGTTGTTTTGACATAAAGATGGTAATGTCTGAAATAAAT  97
       |||||||||||||   |||||||| ||||||||||||||||||||||||
seq2  -AAACTGAGTCTGT--GTTTGACATTAAGATGGTAATGTCTGAAATAAAT  93

seq1  GAAAC-AAAAAAATCTTAATAATAAAATATCTTTATTCCG-AAAACATGG  145
      ||||| |||||||||||||||||||||||||||| | ||| |||||||||
seq2  GAAACAAAAAAAATCTTAATAATAAAATATCTTTTTCCCGAAAAACATGG  143

seq1  CTTCTGGAGAATTA-TTTGAAG-ACTTGACAGAAAATAGGACTACTGCTG  193
      |||||||||||||| ||||||| |||||||||||||||||||||||||||
seq2  CTTCTGGAGAATTATTTTGAAGAACTTGACAGAAAATAGGACTACTGCTG  193

seq1  AGAAACAC-AAGAGCAACACAAGGCCTAGAATAAATGAATCCACTAACTG  242
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACACAAAGAGCAACACAAGGCCTAGAATAAATGAATCCACTAACTG  243

seq1  CATGTTTACCATATGATCAGTTAGGATGGGTGTGCTCTAGTGGTCAAGTG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTTACCATATGATCAGTTAGGATGGGTGTGCTCTAGTGGTCAAGTG  293

seq1  TAGGCACTGAATTCTCACATCCTC-TTTTTTCTTAT-CCATAAAAGGATA  340
      |||||||||||||||||||||||| ||||||||||| |||||||||||||
seq2  TAGGCACTGAATTCTCACATCCTCTTTTTTTCTTATCCCATAAAAGGATA  343

seq1  AATAAAACCTCTAATTCCAGACCTGAGACATGGGTGGGAGGGAAAACTAA  390
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAAACCTCTAATTCCAGACCTGAGACATGGGTGGGAGGGAAAACTAA  393

seq1  ACTGAAACAGCAGGAGATAAAGAAGGAATTTCACCTTCAGTCATGGACAT  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAAACAGCAGGAGATAAAGAAGGAATTTCACCTTCAGTCATGGACAT  443

seq1  GAGCTCCGGGATGAACTCCCAGACAGAAAGGAACATTGGATCTGAGAGAG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCGGGATGAACTCCCAGACAGAAAGGAACATTGGATCTGAGAGAG  493

seq1  AAGCACATTATTTTAATCCTGCACAGAGTACCGCTCTCGGCCCTACATGT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCACATTATTTTAATCCTGCACAGAGTACCGCTCTCGGCCCTACATGT  543

seq1  CTTAACATTGGGTCTTACGAATGGCTGTGCCAGTCACATGCACCAAAAAT  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAACATTGGGTCTTACGAATGGCTGTGCCAGTCACATGCACCAAAAAT  593

seq1  TCCCTTCATGATGCCCACAGGTTAGAAATTTACTTATAGTAATTTTAGCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCATGATGCCCACAGGTTAGAAATTTACTTATAGTAATTTTAGCT  643

seq1  CTAAATTGGGAAGAACCAAATACTCTCTGGGAAAATCTGGAAACCGTGAG  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATTGGGAAGAACCAAATACTCTCTGGGAAAATCTGGAAACCGTGAG  693

seq1  CATCTCCCCAGCTATCCCTTCCAACTTCCCTCGCTGGGGGTGGGGTGGGG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCCCCAGCTATCCCTTCCAACTTCCCTCGCTGGGGGTGGGGTGGGG  743

seq1  TGGGTGGATGACCTGCTGATGCAGCCCTTTTTCTCTTTCAGTCATGTTGG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGTGGATGACCTGCTGATGCAGCCCTTTTTCTCTTTCAGTCATGTTGG  793

seq1  TATCGCCTGTCCATGCTACCTGCAGCAGAGAACTCAGAGAGGTATCTGGG  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCGCCTGTCCATGCTACCTGCAGCAGAGAACTCAGAGAGGTATCTGGG  843

seq1  ACACACAGCTTTCCTTCTCCATTTTGCCTATGCCCTTTAGCTTCTTCTTT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACAGCTTTCCTTCTCCATTTTGCCTATGCCCTTTAGCTTCTTCTTT  893

seq1  CTACAACAGAGTCACATTCATTTATGCCTACCAGCACGCTTGCAGAGATG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACAACAGAGTCACATTCATTTATGCCTACCAGCACGCTTGCAGAGATG  943

seq1  CCCTTCTCAAGGGTCTATTGTAACAAGAATTC  972
      ||||||||||||||||||||||||||||||||
seq2  CCCTTCTCAAGGGTCTATTGTAACAAGAATTC  975