BAC Information

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BAC

Clone NameB6Ng01-055C02
Chromosome19 (Build37)
Map Location 11,895,381 - 11,895,937
singlet/doubletsinglet
Overlap genenone
Upstream geneCd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3
Downstream geneOlfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-055C02.bB6Ng01-055C02.g
ACCDH877678DH877679
length1,212922
definitionDH877678|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C02, 5' end.DH877679|Mus musculus domesticus DNA, BAC clone: B6Ng01-055C02, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaattcctaaaacccagatacaaacacaaggtatagaggtatctc
tataatcctagcactggaaaggcagggacaggtggatccctgaccagcca
gtgcagcctaactggtgagttctgtgccatgggccttggtgtggcacagc
cttgagaactatgtgtcctgaggactttatgctgtaatggaattctgctc
tgcttgcattcctcttactctaagagttatatgaaaactttaagggggct
tccagtccctcactgggcagtatctctggcattcgcaatattaatgtttg
atctctttcaggcattgctgctggagcaggttatgattctatcaccaccc
tagagaagaatttagagatggacattgtcaacagtgaccaccacccttag
aaaacacttggaaaaataaagttgttagtgaagctaggttgagatgtttt
tactactggctctgatataaaatatcttacggaacaatatgaagttcaga
aagacacacacactcttacgagttaagctagggaccttttatgatcaggg
aacaagaacaatggcagcactggctgacgtgactctcactgaggctggac
tggtgataattgatttcttttttttttattacatattttcctcaattaca
tttccaatgctatcccaaaagtcccccataccctcccccccacttcccta
cccacccattcccatttttttggccctggcatccccctgtactggggcat
atacagtttgcgtgtccaatgggcctctctttccagtgatggccgactag
gccatcttttgatacatatgcagctagagtcaagagctccggggtactgg
ttagttcataatgttgttccacctatagggttgcagatccctttagctcc
ttgggtactttctctagctcctcattggagccctgtgctcatccaatagc
tgactgtgagcatcactctgtgttgctagcctggcatagtctcacagagc
tacatctggatctttcgataaatctgctagtgtatgcatgtgtcagcgtc
gagctgattatggggggatcctgggttgcagtctaaatgtcatctcgtct
cagctctacttgtcccgtaatcctcatgggtttgtcatccagagggccag
tccacctgcctatcttgaatcaagtttgcagattatgtggaatctcaagg
tctgtgagacgt
gaattcaagacatccaattttagaaacaccttaggtttgtccctcctccc
cgccccctgccattcattgttttttgagacaatgtctttcactggcctgg
cgctcacagctaggtagatctggctggtaaatctcagggatccactgttt
ctactttcccagttctggaattaccagtatgtgccactgtgtttgattat
tattattattatcattattattattattattattattataagttctggga
attgaactccggtcctcatatttgtggaggaagcactttactgactgagc
tatctcttaagctctgacttatgtttttttttttttttttaagtgtctgg
attaaggcaagaagtaatagggaagaaaacttgttctgtataataacttt
ttaacagagctggtaccattcagtcatggaaggtactaccttgggagtat
acagaaaaactgagcaaattaaaatgaccagtgaccactaacaaaaagct
gttccatgctatgtatcctatggtggccttatctaatgcacctttctgat
tctataatagtctgtgactttcattgtatcacagctattgtccagctatg
taaattagatatcggtagtaagcagagtgcttctattcatggagattata
aggacttagtgtacaggagaagcacggtttcttctcccatccccagagct
agttttgcatcaagtaacctattcatgccagccttcctgctgtttgtctg
tggatctgaatgagtttaacctcttactggttgcttcactaataagctaa
aacattaaaatatattcattttatatttgcatgagagtcacattttttcc
ctgttgaaatcaattatatcctttaaatatttgctgggacttaaaaattt
tttttttacttgtatgatgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_11895381_11895937
seq2: B6Ng01-055C02.g_66_622 (reverse)

seq1  TTATAGAATCAGAAAGGTGCATTAGATAAGGCCACCATAGGATACATAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATAGAATCAGAAAGGTGCATTAGATAAGGCCACCATAGGATACATAGC  50

seq1  ATGGAACAGCTTTTTGTTAGTGGTCACTGGTCATTTTAATTTGCTCAGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAACAGCTTTTTGTTAGTGGTCACTGGTCATTTTAATTTGCTCAGTT  100

seq1  TTTCTGTATACTCCCAAGGTAGTACCTTCCATGACTGAATGGTACCAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTATACTCCCAAGGTAGTACCTTCCATGACTGAATGGTACCAGCT  150

seq1  CTGTTAAAAAGTTATTATACAGAACAAGTTTTCTTCCCTATTACTTCTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTAAAAAGTTATTATACAGAACAAGTTTTCTTCCCTATTACTTCTTG  200

seq1  CCTTAATCCAGACACTTAAAAAAAAAAAAAAAAACATAAGTCAGAGCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAATCCAGACACTTAAAAAAAAAAAAAAAAACATAAGTCAGAGCTTA  250

seq1  AGAGATAGCTCAGTCAGTAAAGTGCTTCCTCCACAAATATGAGGACCGGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGATAGCTCAGTCAGTAAAGTGCTTCCTCCACAAATATGAGGACCGGA  300

seq1  GTTCAATTCCCAGAACTTATAATAATAATAATAATAATAATAATGATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAATTCCCAGAACTTATAATAATAATAATAATAATAATAATGATAAT  350

seq1  AATAATAATAATCAAACACAGTGGCACATACTGGTAATTCCAGAACTGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATAATAATCAAACACAGTGGCACATACTGGTAATTCCAGAACTGGG  400

seq1  AAAGTAGAAACAGTGGATCCCTGAGATTTACCAGCCAGATCTACCTAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTAGAAACAGTGGATCCCTGAGATTTACCAGCCAGATCTACCTAGCT  450

seq1  GTGAGCGCCAGGCCAGTGAAAGACATTGTCTCAAAAAACAATGAATGGCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCGCCAGGCCAGTGAAAGACATTGTCTCAAAAAACAATGAATGGCA  500

seq1  GGGGGCGGGGAGGAGGGACAAACCTAAGGTGTTTCTAAAATTGGATGTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGCGGGGAGGAGGGACAAACCTAAGGTGTTTCTAAAATTGGATGTCT  550

seq1  TGAATTC  557
      |||||||
seq2  TGAATTC  557