BAC Information

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BAC

Clone NameB6Ng01-057E19
Chromosome2 (Build37)19 (Build37)
Map Location 60,394,491 - 60,394,77253,932,453 - 53,933,453
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneLOC100038999, LOC100039016, Tanc1, Wdsub1, Baz2b, LOC667103, LOC667106, Ldha-ps, LOC100039092, March7, Cd302, LOC625861, Ly75, LOC100039176, Pla2r1
Downstream geneItgb6, Rbms1, ENSMUSG00000075325
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-057E19.bB6Ng01-057E19.g
ACCDH879210DH879211
length924992
definitionDH879210|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E19, 5' end.DH879211|Mus musculus domesticus DNA, BAC clone: B6Ng01-057E19, 3' end.
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(60,394,491 - 60,394,772)(53,932,453 - 53,933,453)
sequence
gaattctcaatggagattctaaaagccagaaaggattggacagctgtgct
acagattctaagagatcacagatgccactcagattactatacccagcaaa
acgttcaattaccacagatggagaaataagttatttcatgataaaatcaa
aatttaaaaatatctatctaagcagggcattggtggcgtgtgcctttaac
cccagcacttgagaggcagaggcaggtggatttctgagttcgaggccagc
ctggttggtctacagagtgagttccaggacagccagggctacacagagaa
acccagtctcggaaaaaaaaaaaaaaaaatctattgtactggctagtttt
gtgtcaacttgacacagctggagttatcacagagaaaggagcttcagttg
aggaaatgcctccatgagatccagctgtaaggcattttctcaattagtga
tcaagcgggaaaggccacttgtgggtgggaccatctctggactggtaatc
ttgggttctataagagagcaggctgagcaaaccaggggaggcaaaccagt
aaagaacatccctccgtggcctctgcatcagctcctgcttcctgccctgc
ttgagttccagtcctgacttcctttggtgatgaacagcagtatggaagtg
taagctgaataaaccctttcctccccaagtgcttcttggtcatgaagttt
gtgcaggaatagaaaccctgactaagacaaattggtaccagcatagtggg
gtattcctgtgacaacctgaccacgttttggggaggactgtggaaggact
ttgaaactttgggcttgaagatccatttgttattaagagctctgtcagat
gttgttgagagcttgggagacaatgtgatacagtgcagaagatggagtct
ggcttgtgaaatttcagagggaaa
gaattctttcctaatacattggaggctcctgggaagccggttcctacagc
catcgcacagctattttgcaacagcagaagagagagatcgcgagtcttgc
ttgatgcctacttcccagctacagcctggagcattctcccccccacccac
cccgctaagctgggccacatgtctatcctctgcacacagagggtgaagaa
gaaggacactcagtctctgggagtgggggcagctgaatctgagtgacact
ttctcagttctgggaattgctgttgaatcctgggggctctgcagatagca
agctagcagctgcatggcttagagacagcccaggtcccaggcttcagtgt
ggagctctgcgctggcaggctgcaagcagtttcctgggctttcttgcttc
tcctgttctctctcagagctgccctgttcatatgtatacatttactatca
tcatcgtcattatcatcaccatcatcaccatcagttattattgagctgta
aaggaaagctctatttataagattagatctcctgagcaccagtagagaaa
gaacaggggggcagactgtggttaggaggctgtctcagagccctgaggaa
tgagtgcctcatcacagttaacccattttcccagattgtcccagcagagg
acatgagagcggcaccttctgccccggctgctgtggtcttgaagactccc
gtcaagggggtagaacctgagtgccctaggcttagctcttctggttggca
catgcaatcctagcactgggggaagcagaggcgggtacatctctgtgagt
ccaggccagcctgatcaacagagcgagttcaggtcagatgataggctaca
aagtaagatccagtctcaaacaaatgcaaacaaccacaaaactgcccctc
cccaaagtcctgtatatcaacaatccactcagaaagacatgttacataga
gtgatgggtgaatttcctcttatatgtgttgtttattttttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr2_60394491_60394772
seq2: B6Ng01-057E19.b_492_773 (reverse)

seq1  TGTCTTAGTCAGGGTTTCTATTCCTGCACAAACATCATGACCAAGAAGCA  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||| 
seq2  TGTCTTAGTCAGGGTTTCTATTCCTGCACAAACTTCATGACCAAGAAGC-  49

seq1  AGTTGTGGAGGAAAGGGTTTATTCAGCTTACACTTCCACACTGCTGTTCA  100
      | ||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  ACTTGGGGAGGAAAGGGTTTATTCAGCTTACACTTCCATACTGCTGTTCA  99

seq1  TCACC-AAGGAAGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGC  149
      ||||| ||||||||||||||||||||||||||||| ||||||||||||||
seq2  TCACCAAAGGAAGTCAGGACTGGAACTCAAGCAGGGCAGGAAGCAGGAGC  149

seq1  TGATGCAGAGGCCATGGAGGGATGTTCCTTACTGGCTTGCTTCCCTTGGC  199
      |||||||||||||| |||||||||||| ||||||| |||| |||| ||| 
seq2  TGATGCAGAGGCCACGGAGGGATGTTCTTTACTGGTTTGCCTCCCCTGGT  199

seq1  TTGCTCAGCCTGCTCTCTTATAGAACCCAAGACTACCAGGCCAGAGATGG  249
      |||||||||||||||||||||||||||||||| |||||| ||||||||||
seq2  TTGCTCAGCCTGCTCTCTTATAGAACCCAAGATTACCAGTCCAGAGATGG  249

seq1  TCCCACCCACAAGGGGCCTTTCCCCTTTGATCA  282
      ||||||||||||| ||||||||||  |||||||
seq2  TCCCACCCACAAGTGGCCTTTCCCGCTTGATCA  282

seq1: chr19_53932453_53933453
seq2: B6Ng01-057E19.g_70_1061

seq1  GAATTCTTTCCTAATACATTGGAGGCTCCTGGGAAGCCGGTTCCTACAGC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTCCTAATACATTGGAGGCTCCTGGGAAGCCGGTTCCTACAGC  50

seq1  CATCGCACAGCTATTTTGCAACAGCAGAAGAGAGAGATCGCGAGTCTTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCGCACAGCTATTTTGCAACAGCAGAAGAGAGAGATCGCGAGTCTTGC  100

seq1  TTGATGCCTACTTCCCAGCTACAGCCTGGAGCATTCTCCCCCCCACCCAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATGCCTACTTCCCAGCTACAGCCTGGAGCATTCTCCCCCCCACCCAC  150

seq1  CCCGCTAAGCTGGGCCACATGTCTATCCTCTGCACACAGAGGGTGAAGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGCTAAGCTGGGCCACATGTCTATCCTCTGCACACAGAGGGTGAAGAA  200

seq1  GAAGGACACTCAGTCTCTGGGAGTGGGGGCAGCTGAATCTGAGTGACACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGACACTCAGTCTCTGGGAGTGGGGGCAGCTGAATCTGAGTGACACT  250

seq1  TTCTCAGTTCTGGGAATTGCTGTTGAATCCTGGGGGCTCTGCAGATAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCAGTTCTGGGAATTGCTGTTGAATCCTGGGGGCTCTGCAGATAGCA  300

seq1  AGCTAGCAGCTGCATGGCTTAGAGACAGCCCAGGTCCCAGGCTTCAGTGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTAGCAGCTGCATGGCTTAGAGACAGCCCAGGTCCCAGGCTTCAGTGT  350

seq1  GGAGCTCTGCGCTGGCAGGCTGCAAGCAGTTTCCTGGGCTTTCTTGCTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCTGCGCTGGCAGGCTGCAAGCAGTTTCCTGGGCTTTCTTGCTTC  400

seq1  TCCTGTTCTCTCTCAGAGCTGCCCTGTTCATATGTATACATTTACTATCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTCTCTCTCAGAGCTGCCCTGTTCATATGTATACATTTACTATCA  450

seq1  TCATCGTCATTATCATCACCATCATCACCATCAGTTATTATTGAGCTGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCGTCATTATCATCACCATCATCACCATCAGTTATTATTGAGCTGTA  500

seq1  AAGGAAAGCTCTATTTATAAGATTAGATCTCCTGAGCACCAGTAGAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAAAGCTCTATTTATAAGATTAGATCTCCTGAGCACCAGTAGAGAAA  550

seq1  GAACAGGGGGGCAGACTGTGGTTAGGAGGCTGTCTCAGAGCCCTGAGGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGGGGGCAGACTGTGGTTAGGAGGCTGTCTCAGAGCCCTGAGGAA  600

seq1  TGAGTGCCTCATCACAGTCAACCCATTTTCCCAGATTGTCCCAGCAGAGG  650
      |||||||||||||||||| |||||||||||||||||||||||||||||||
seq2  TGAGTGCCTCATCACAGTTAACCCATTTTCCCAGATTGTCCCAGCAGAGG  650

seq1  ACATGAGAGCGGCACCTTCTGCCCCGGCTGCTGTGGTCTTGAAGACTCCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGAGAGCGGCACCTTCTGCCCCGGCTGCTGTGGTCTTGAAGACTCCC  700

seq1  GTCAAGGGGGTAGAACCTGAGTGCCCTAGGCTTAGCTCTTCTGG-TGGCA  749
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GTCAAGGGGGTAGAACCTGAGTGCCCTAGGCTTAGCTCTTCTGGTTGGCA  750

seq1  CATGCAATCCTAGCACT-GGGGAAGCAGAGGCGGGTACATCTCTGTGAGT  798
      ||||||||||||||||| ||||||||||||||||||||||||||||||| 
seq2  CATGCAATCCTAGCACTGGGGGAAGCAGAGGCGGGTACATCTCTGTGAG-  799

seq1  TCCAGGCCAGCCTGATCAACAGAGCGAGTTCAGGTCAGATGATAAGGCTA  848
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TCCAGGCCAGCCTGATCAACAGAGCGAGTTCAGGTCAGATGAT-AGGCTA  848

seq1  CAAAGTAAGATCCAGTCTCAAACAAATGCAAAACAACCACAAAACTGCCC  898
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAAAGTAAGATCCAGTCTCAAACAAATGC-AAACAACCACAAAACTGCCC  897

seq1  CTCCCCCAAAGTCCTGTATATCAACAAATCACTCAGAAAGACATGTTTAC  948
      || ||||||||||||||||||||||||  |||||||||||||||| ||||
seq2  CT-CCCCAAAGTCCTGTATATCAACAATCCACTCAGAAAGACATG-TTAC  945

seq1  ATTAGAGTGAATGGGTGAATTTTCCTCTTACTATTGTTTGGTTTTATTTT  998
      | ||||||| ||||||||| |||||||||| |||   |||  ||||||||
seq2  A-TAGAGTG-ATGGGTGAA-TTTCCTCTTA-TATGTGTTG--TTTATTTT  989

seq1  TTT  1001
      |||
seq2  TTT  992