BAC Information

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BAC

Clone NameB6Ng01-059P06
Chromosome19 (Build37)
Map Location 21,956,936 - 22,076,671
singlet/doubletdoublet
Overlap geneEG433229
Upstream geneTmc1, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda, LOC100041633, 1110059E24Rik, 5730446C15Rik, Tmem2
Downstream geneTrpm3, EG433230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059P06.bB6Ng01-059P06.g
ACCDH881079DH881080
length830991
definitionDH881079|Mus musculus domesticus DNA, BAC clone: B6Ng01-059P06, 5' end.DH881080|Mus musculus domesticus DNA, BAC clone: B6Ng01-059P06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,075,842 - 22,076,671)(21,956,936 - 21,957,940)
sequence
gaattctcctttggcagtgaggatgaagctgattaaagaggtaggctgtc
tgcttaaagctcacgttacctgggatcaatttaaatgtactgtgatgtgg
tgacaatgaggactaatgaaggttatgtttcttgcttccccacccagctg
ataattcagcctttcttttcagtttctacgtacgctgtcttcctgtggtc
acttgacttatttacagctatacaaatcacagaacatattaagacaatga
cttctggcatatatgctagcacatggctttacataaatcccacttctact
tcacctggtagtacatgtctgaaatccaagcacttagtaggaagaaggga
tcccaaattcaaggtattctgggccacatagtcagaccctgttcccttcc
ttcccaccaaaagaacatttctgaatggacctgtatcatcaaatacacac
atatgtagttttctaacacctaaatagacatttttaaaaatacaaaagca
aaagcaagcactgtgcccagatgaaatcaagctacgtctaccagtgagtg
ttcgtaaactagagactatgctaaccaggccagacactgctgcagtaaat
agcctgcccagttgtacagtgaccctgggttagggaatgcaaaacagact
cagcggtggaaagctggccctttttctggttaacccagcattatcagcaa
agaagaatggacacagaggcaggagagtttctgcaaggtcacagccagcc
tgggctacagtatgagacactgtgttacaggggaacaccagggccaaaaa
gggggagtgggtgggcaggggagtgggggt
gaattcactttcatttagatcagacaattgaaccaatggaagaatgcttg
cccacttctctcggctcctatatgccttagaaccaaattttgtttgtgca
atctgcgagtgattttttttttcccttctcatctgccaaagggtagggag
tggaagataattgctcaagggaaagctctttgttcattgtctctgatcta
tttcataggaaaatttccataggaattctaggaagagaaacaagctgagg
gagagagtgacatttgagctgttgagtgttggctggttctgtggctagcc
gggtagccaatgagtgttcctagccattgagtgttcctgtctccggttct
gtggctagcagcacagccaaacctaaggaatgtgggcagtctttgaattg
gagctccatgtctggccacaatgctaatagttcctcaagggatacttggt
atttgctgctaggggcctccactggctttttttcttagacacaggcaaac
tcttgagacccattcaaaagggttgcagtaaggaaggatggtagaaagga
ggtaaacatgactcagtttccctttcctgacagtcacctcccctttgtca
gatgttgcctagtgtcagtgacctcttcttggggttctctctttccagat
agggaggggcatatacctgggaagccgatatcaggaagctgtggtctaga
gagctggcatagggagcagggatagaaatagacgcttaggtgatgtgaac
aaagcccaagtagcttacaggaatcaagaggacctggaaaaacccctaag
gcctgaagccttttgtttggaaagttttgcagcatagaggctggccaggt
ctcaagaaagcttttccaccaggtttcaaaacaaattactgagggggaaa
aaagaaaaagaatctagaataaccgaagcatctttctttccttttgttgc
cagtgtaattcagcgaaagcctggtgagttgatatggagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_22075842_22076671
seq2: B6Ng01-059P06.b_51_880 (reverse)

seq1  ACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCCACTCCCCTGCCCACCCACTCCCCCTTTTTGGCCCTGGTGTTCCC  50

seq1  CTGTAACACAGTGTCTCATACTGTAGCCCAGGCTGGCTGTGACCTTGCAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAACACAGTGTCTCATACTGTAGCCCAGGCTGGCTGTGACCTTGCAG  100

seq1  AAACTCTCCTGCCTCTGTGTCCATTCTTCTTTGCTGATAATGCTGGGTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTCTCCTGCCTCTGTGTCCATTCTTCTTTGCTGATAATGCTGGGTTA  150

seq1  ACCAGAAAAAGGGCCAGCTTTCCACCGCTGAGTCTGTTTTGCATTCCCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGAAAAAGGGCCAGCTTTCCACCGCTGAGTCTGTTTTGCATTCCCTA  200

seq1  ACCCAGGGTCACTGTACAACTGGGCAGGCTATTTACTGCAGCAGTGTCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCAGGGTCACTGTACAACTGGGCAGGCTATTTACTGCAGCAGTGTCTG  250

seq1  GCCTGGTTAGCATAGTCTCTAGTTTACGAACACTCACTGGTAGACGTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGGTTAGCATAGTCTCTAGTTTACGAACACTCACTGGTAGACGTAGC  300

seq1  TTGATTTCATCTGGGCACAGTGCTTGCTTTTGCTTTTGTATTTTTAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTCATCTGGGCACAGTGCTTGCTTTTGCTTTTGTATTTTTAAAAA  350

seq1  TGTCTATTTAGGTGTTAGAAAACTACATATGTGTGTATTTGATGATACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATTTAGGTGTTAGAAAACTACATATGTGTGTATTTGATGATACAG  400

seq1  GTCCATTCAGAAATGTTCTTTTGGTGGGAAGGAAGGGAACAGGGTCTGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCATTCAGAAATGTTCTTTTGGTGGGAAGGAAGGGAACAGGGTCTGAC  450

seq1  TATGTGGCCCAGAATACCTTGAATTTGGGATCCCTTCTTCCTACTAAGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGGCCCAGAATACCTTGAATTTGGGATCCCTTCTTCCTACTAAGTG  500

seq1  CTTGGATTTCAGACATGTACTACCAGGTGAAGTAGAAGTGGGATTTATGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGATTTCAGACATGTACTACCAGGTGAAGTAGAAGTGGGATTTATGT  550

seq1  AAAGCCATGTGCTAGCATATATGCCAGAAGTCATTGTCTTAATATGTTCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCATGTGCTAGCATATATGCCAGAAGTCATTGTCTTAATATGTTCT  600

seq1  GTGATTTGTATAGCTGTAAATAAGTCAAGTGACCACAGGAAGACAGCGTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTTGTATAGCTGTAAATAAGTCAAGTGACCACAGGAAGACAGCGTA  650

seq1  CGTAGAAACTGAAAAGAAAGGCTGAATTATCAGCTGGGTGGGGAAGCAAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTAGAAACTGAAAAGAAAGGCTGAATTATCAGCTGGGTGGGGAAGCAAG  700

seq1  AAACATAACCTTCATTAGTCCTCATTGTCACCACATCACAGTACATTTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATAACCTTCATTAGTCCTCATTGTCACCACATCACAGTACATTTAA  750

seq1  ATTGATCCCAGGTAACGTGAGCTTTAAGCAGACAGCCTACCTCTTTAATC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGATCCCAGGTAACGTGAGCTTTAAGCAGACAGCCTACCTCTTTAATC  800

seq1  AGCTTCATCCTCACTGCCAAAGGAGAATTC  830
      ||||||||||||||||||||||||||||||
seq2  AGCTTCATCCTCACTGCCAAAGGAGAATTC  830

seq1: chr19_21956936_21957940
seq2: B6Ng01-059P06.g_69_1059

seq1  GAATTCACTTTCATTTAGATCAGACAATTGAACCAATGGAAGAATGCTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTCATTTAGATCAGACAATTGAACCAATGGAAGAATGCTTG  50

seq1  CCCACTTCTCTCGGCTCCTATATGCCTTAGAACCAAATTTTGTTTGTGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACTTCTCTCGGCTCCTATATGCCTTAGAACCAAATTTTGTTTGTGCA  100

seq1  ATCTGCGAGTGATTTTTTTTTTCCCTTCTCATCTGCCAAAGGGTAGGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGCGAGTGATTTTTTTTTTCCCTTCTCATCTGCCAAAGGGTAGGGAG  150

seq1  TGGAAGATAATTGCTCAAGGGAAAGCTCTTTGTTCATTGTCTCTGATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGATAATTGCTCAAGGGAAAGCTCTTTGTTCATTGTCTCTGATCTA  200

seq1  TTTCATAGGAAAATTTCCATAGGAATTCTAGGAAGAGAAACAAGCTGAGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGGAAAATTTCCATAGGAATTCTAGGAAGAGAAACAAGCTGAGG  250

seq1  GAGAGAGTGACATTTGAGCTGTTGAGTGTTGGCTGGTTCTGTGGCTAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGTGACATTTGAGCTGTTGAGTGTTGGCTGGTTCTGTGGCTAGCC  300

seq1  GGGTAGCCAATGAGTGTTCCTAGCCATTGAGTGTTCCTGTCTCCGGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTAGCCAATGAGTGTTCCTAGCCATTGAGTGTTCCTGTCTCCGGTTCT  350

seq1  GTGGCTAGCAGCACAGCCAAACCTAAGGAATGTGGGCAGTCTTTGAATTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTAGCAGCACAGCCAAACCTAAGGAATGTGGGCAGTCTTTGAATTG  400

seq1  GAGCTCCATGTCTGGCCACAATGCTAATAGTTCCTCAAGGGATACTTGGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCCATGTCTGGCCACAATGCTAATAGTTCCTCAAGGGATACTTGGT  450

seq1  ATTTGCTGCTAGGGGCCTCCACTGGCTTTTTTTCTTAGACACAGGCAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGCTAGGGGCCTCCACTGGCTTTTTTTCTTAGACACAGGCAAAC  500

seq1  TCTTGAGACCCATTCAAAAGGGTTGCAGTAAGGAAGGATGGTAGAAAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGACCCATTCAAAAGGGTTGCAGTAAGGAAGGATGGTAGAAAGGA  550

seq1  GGTAAACATGACTCAGTTTCCCTTTCCTGACAGTCACCTCCCCTTTGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACATGACTCAGTTTCCCTTTCCTGACAGTCACCTCCCCTTTGTCA  600

seq1  GATGTTGCCTAGTGTCAGTGACCTCTTCTTGGGGTTCTCTCTTTCCAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTTGCCTAGTGTCAGTGACCTCTTCTTGGGGTTCTCTCTTTCCAGAT  650

seq1  AGGGAGGGGCATATACCTGGGAAGCCGATATCAGGAAGCTGTGGTCTAGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGGGGCATATACCTGGGAAGCCGATATCAGGAAGCTGTGGTCTAGA  700

seq1  GAGCTGGCATAGGGAGCAGGGATAGAAATAGACGCTTAGGTGATGTGAAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTGGCATAGGGAGCAGGGATAGAAATAGACGCTTAGGTGATGTGAAC  750

seq1  AAAGCCCAAGTAGCTTACAGGAATCAAGAGGACCTGGAAAAACCCCTAAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCCCAAGTAGCTTACAGGAATCAAGAGGACCTGGAAAAACCCCTAAG  800

seq1  GCCTGAAGCC-TTTGTTTGGAAAGTTTTGCAGCATAGAGGCTGGCCAGGT  849
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  GCCTGAAGCCTTTTGTTTGGAAAGTTTTGCAGCATAGAGGCTGGCCAGGT  850

seq1  CTCAAGAAAGCTTTTCCACCAGAGTTTCAAAACAAAATACTGAGGGGGGA  899
      |||||||||||||||||||||| ||||||||||||| |||||||||||  
seq2  CTCAAGAAAGCTTTTCCACCAG-GTTTCAAAACAAATTACTGAGGGGG--  897

seq1  AAAAAAAGAAAAAAGAAACCTAGAATAAACAGAAAGCATCTCTCTTTCCT  949
       ||||||||||||   || ||||||||| |   |||||||| ||||||| 
seq2  -AAAAAAGAAAAA--GAATCTAGAATAACC--GAAGCATCTTTCTTTCC-  941

seq1  TTTTGTTGGCCAAGTTGTAAGTTCAGCGAGAGGCCTGGTGAGCTGGATAT  999
      ||||||| ||||   ||||| |||||||| | |||||||||| | |||||
seq2  TTTTGTT-GCCA--GTGTAA-TTCAGCGA-AAGCCTGGTGAG-TTGATAT  985

seq1  GGAGAG  1005
      ||||||
seq2  GGAGAG  991