BAC Information

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BAC

Clone NameB6Ng01-061G07
Chromosome19 (Build37)
Map Location 26,735,321 - 26,830,632
singlet/doubletdoublet
Overlap geneSmarca2
Upstream geneDmrt2, EG667806, 1700048O14Rik, LOC100041846, LOC100041857
Downstream geneGm815, LOC100042576, Vldlr, LOC100042588, Kcnv2, D19Bwg1357e, LOC667868
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061G07.bB6Ng01-061G07.g
ACCDH882085DH882086
length1,1241,089
definitionDH882085|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G07, 5' end.DH882086|Mus musculus domesticus DNA, BAC clone: B6Ng01-061G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,829,506 - 26,830,632)(26,735,321 - 26,736,414)
sequence
gaattcttgtgggcaaggttcaaatgggcagtacaagagcagaatatgcc
cggggagggtctaagtgtcactcagagaacaaagggggatgtttctacct
gaagaaggtggccctgggctggggatgcccatttagaactattttcaaag
gacatctcttgaaacaagactggattcattctctgactagtttgtagact
agctaaaaatcagtggaaaggatttcaatgtgggaaagaacaaccatatc
gaagacagtcttgcagcgtcaagaagttcctccagaaaccatgccctaat
gtgggatccacatccacaggctggaggactttctgtcaccagggctgctg
ctgcacctgagtcacaggacaccacaccaggcagagccaaagcccagaac
ctctgcctttaaggctgtctctaggaaccttttcctgagacctagaagac
ttgcagggtaggtctccacctattccccatggcatctcatggcgatttta
aagagtacaggtgcaacagaggaggaatcctttacaaagaaacggagtgc
ctcgggttaaatattatagaaggtgagagggtggttaacagccttcaaaa
caagcagagaacaaaacatgtccacgaagtcaaaacaaagtatggcttga
gataaagttttctatctgggacaaataacatggtaggaactagtagccgt
agtcctgtactgcctaatagccattggttcgtgaatcacacaatgtgatc
ggctcttccgggtcacattttaaaaccgtatcatgctttaaaatataaag
cagtaaatatacacaaattatcttaagtctttatggaaatatcaagccac
atctgtctccgaatcgtgcaaggatttttaaacaactgctcctgagggct
tattcttctatctatctgttaagtagagatggaggtctgacttaatctac
tcttcagctacacagccattggaactcgactaacactggacggcatgtta
gatggggtttcgtacagtggccctccttctttaagtaggctgagtaactg
tattaataaactgacgctaatggctggaggaacctcaacacgcaagatgt
acttcttccagtagcttttttttt
gaattccagttgacattggcctttgaaattgtggccccagatctgtttga
tttttagtacttttttttttttgtagtgagtaatctttagttaggagtag
tttgtatcacacacatccccctgccattcatccccatataagcatagata
ggaggaagccaggacagggtcccttcggcctcgattaatgaatgaacttc
aatgtattagcttgatcttttgtttcaatcaatggggttaagcgcaggca
ccaaccagcagtattagagcatttggtggtggttccatgacacagaccac
tgtgggagaatggttttcaggcagtggctgtacggctacctgtgtcacat
acgcaccaagctatctcacctggggcccagagacataaaagtcacatctc
ttgagtatctagagaaaggagggaaggcggctttggttttcttttctgtg
ttgacttgagtttggcaggagaacatggatttctgaaaggatgtccacag
acaccagaaggccaggtcacgatgagaggggctggcggttctctctgtag
actagactgccacctgcctttcatgtcttataatcatgtggcagaattgg
gttcaaggacagggtgagtgtgacagaggtggcagaggaccctagttcat
tgatgaatcctatgtgtgagtgttcttaaccattttatgacttgagaaat
attttggctttcaattgcaataatggtagcaataatagtaataaaaataa
tgaacagtgataacaacaataatatgaattattcagttagtggatcctaa
gtgaaatgcattgttcacaatgatgctttgttatttgtctgctaaatgct
cattttggtgattcctaagtgctgggcaccctgtaggcgtgaccctcctt
gacacatagaagtctctggccttgtaactttaagaggcagttttcagatc
gtgcatagcctgtctaattaacaagcataacaatagctctgacctactac
cattcatggtcccgagcttggggagttattttttttggtcatgtgcatgg
tgaattcaggattgagccgttgaaacagaacccagttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_26829506_26830632
seq2: B6Ng01-061G07.b_47_1170 (reverse)

seq1  AAAAAAAAAGCTACTGGAAGGATGTACATCTTGCTGTGTTGAGGTTCCTC  50
      ||||||||||||||||||| || ||||||||||| |||||||||||||||
seq2  AAAAAAAAAGCTACTGGAA-GAAGTACATCTTGC-GTGTTGAGGTTCCTC  48

seq1  CAG-CATTAGCGTCAG-TTATTAATACAGTAACTCAGCCTACTTAAAGAA  98
      ||| |||||||||||| ||||||||||||| |||||||||||||||||||
seq2  CAGCCATTAGCGTCAGTTTATTAATACAGTTACTCAGCCTACTTAAAGAA  98

seq1  GGAGGGCCACCTGTACGAAACCCCATCTAACATGCCCGTCCAGTGTTAGT  148
      ||||||||| |||||||||||||||||||||||| |||||||||||||||
seq2  GGAGGGCCA-CTGTACGAAACCCCATCTAACATG-CCGTCCAGTGTTAGT  146

seq1  CGGGTTCCAATGGCTGTGTAGCTGAAGAGTAGATTAAGTCAGACCTCCAT  198
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAGTTCCAATGGCTGTGTAGCTGAAGAGTAGATTAAGTCAGACCTCCAT  196

seq1  CTCTACTTAACAGATAGATAAGAAGAATAAGCCCTCAGGAGCAGTTGTTT  248
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CTCTACTTAACAGATAGAT-AGAAGAATAAGCCCTCAGGAGCAGTTGTTT  245

seq1  AAAAATCCTTGCACGATTCGGGGACAGATGTGGCTTGATATTTCCATAAA  298
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AAAAATCCTTGCACGATTCGGAGACAGATGTGGCTTGATATTTCCATAAA  295

seq1  GACTTAAGATAATTTGTGTATATTTACTGCTTTATATTTTAAAGCATGAT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTAAGATAATTTGTGTATATTTACTGCTTTATATTTTAAAGCATGAT  345

seq1  ACGGTTTTAAAATGTGACCCGGAAGAGCCGATCACATTGTGTGATTCACG  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTTTAAAATGTGACCCGGAAGAGCCGATCACATTGTGTGATTCACG  395

seq1  AACCAATGGCTATTAGGCAGTACAGGACTACGGCTACTAGTTCCTACCAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCAATGGCTATTAGGCAGTACAGGACTACGGCTACTAGTTCCTACCAT  445

seq1  GTTATTTGTCCCAGATAGAAAACTTTATCTCAAGCCATACTTTGTTTTGA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTGTCCCAGATAGAAAACTTTATCTCAAGCCATACTTTGTTTTGA  495

seq1  CTTCGTGGACATGTTTTGTTCTCTGCTTGTTTTGAAGGCTGTTAACCACC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCGTGGACATGTTTTGTTCTCTGCTTGTTTTGAAGGCTGTTAACCACC  545

seq1  CTCTCACCTTCTATAATATTTAACCCGAGGCACTCCGTTTCTTTGTAAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCACCTTCTATAATATTTAACCCGAGGCACTCCGTTTCTTTGTAAAG  595

seq1  GATTCCTCCTCTGTTGCACCTGTACTCTTTAAAATCGCCATGAGATGCCA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCCTCCTCTGTTGCACCTGTACTCTTTAAAATCGCCATGAGATGCCA  645

seq1  TGGGGAATAGGTGGAGACCTACCCTGCAAGTCTTCTAGGTCTCAGGAAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGAATAGGTGGAGACCTACCCTGCAAGTCTTCTAGGTCTCAGGAAAA  695

seq1  GGTTCCTAGAGACAGCCTTAAAGGCAGAGGTTCTGGGCTTTGGCTCTGCC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTCCTAGAGACAGCCTTAAAGGCAGAGGTTCTGGGCTTTGGCTCTGCC  745

seq1  TGGTGTGGTGTCCTGTGACTCAGGTGCAGCAGCAGCCCTGGTGACAGAAA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGTGGTGTCCTGTGACTCAGGTGCAGCAGCAGCCCTGGTGACAGAAA  795

seq1  GTCCTCCAGCCTGTGGATGTGGATCCCACATTAGGGCATGGTTTCTGGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCTCCAGCCTGTGGATGTGGATCCCACATTAGGGCATGGTTTCTGGAG  845

seq1  GAACTTCTTGACGCTGCAAGACTGTCTTCGATATGGTTGTTCTTTCCCAC  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTTCTTGACGCTGCAAGACTGTCTTCGATATGGTTGTTCTTTCCCAC  895

seq1  ATTGAAATCCTTTCCACTGATTTTTAGCTAGTCTACAAACTAGTCAGAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATCCTTTCCACTGATTTTTAGCTAGTCTACAAACTAGTCAGAGA  945

seq1  ATGAATCCAGTCTTGTTTCAAGAGATGTCCTTTGAAAATAGTTCTAAATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCCAGTCTTGTTTCAAGAGATGTCCTTTGAAAATAGTTCTAAATG  995

seq1  GGCATCCCCAGCCCAGGGCCACCTTCTTCAGGTAGAAACATCCCCCTTTG  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCCCCAGCCCAGGGCCACCTTCTTCAGGTAGAAACATCCCCCTTTG  1045

seq1  TTCTCTGAGTGACACTTAGACCCTCCCCGGGCATATTCTGCTCTTGTACT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTGAGTGACACTTAGACCCTCCCCGGGCATATTCTGCTCTTGTACT  1095

seq1  GCCCATTTGAACCTTGCCCACAAGAATTC  1127
      |||||||||||||||||||||||||||||
seq2  GCCCATTTGAACCTTGCCCACAAGAATTC  1124

seq1: chr19_26735321_26736414
seq2: B6Ng01-061G07.g_71_1159

seq1  GAATTCCAGTTGACATTGGCCTTTGAAATTGTGGCCCCAGATCTGTTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTTGACATTGGCCTTTGAAATTGTGGCCCCAGATCTGTTTGA  50

seq1  TTTTTAGTACTTTTTTTTTTTTGTAGTGAGTAATCTTTAGTTAGGAGTAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTAGTACTTTTTTTTTTTTGTAGTGAGTAATCTTTAGTTAGGAGTAG  100

seq1  TTTGTATCACACACATCCCCCTGCCATTCATCCCCATATAAGCATAGATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTATCACACACATCCCCCTGCCATTCATCCCCATATAAGCATAGATA  150

seq1  GGAGGAAGCCAGGACAGGGTCCCTTCGGCCTCGATTAATGAATGAACTTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAAGCCAGGACAGGGTCCCTTCGGCCTCGATTAATGAATGAACTTC  200

seq1  AATGTATTAGCTTGATCTTTTGTTTCAATCAATGGGGTTAAGCGCAGGCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTATTAGCTTGATCTTTTGTTTCAATCAATGGGGTTAAGCGCAGGCA  250

seq1  CCAACCAGCAGTATTAGAGCATTTGGTGGTGGTTCCATGACACAGACCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAACCAGCAGTATTAGAGCATTTGGTGGTGGTTCCATGACACAGACCAC  300

seq1  TGTGGGAGAATGGTTTTCAGGCAGTGGCTGTACGGCTACCTGTGTCACAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAGAATGGTTTTCAGGCAGTGGCTGTACGGCTACCTGTGTCACAT  350

seq1  ACGCACCAAGCTATCTCACCTGGGGCCCAGAGACATAAAAGTCACATCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCACCAAGCTATCTCACCTGGGGCCCAGAGACATAAAAGTCACATCTC  400

seq1  TTGAGTATCTAGAGAAAGGAGGGAAGGCGGCTTTGGTTTTCTTTTCTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGTATCTAGAGAAAGGAGGGAAGGCGGCTTTGGTTTTCTTTTCTGTG  450

seq1  TTGACTTGAGTTTGGCAGGAGAACATGGATTTCTGAAAGGATGTCCACAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACTTGAGTTTGGCAGGAGAACATGGATTTCTGAAAGGATGTCCACAG  500

seq1  ACACCAGAAGGCCAGGTCACGATGAGAGGGGCTGGCGGTTCTCTCTGTAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGAAGGCCAGGTCACGATGAGAGGGGCTGGCGGTTCTCTCTGTAG  550

seq1  ACTAGACTGCCACCTGCCTTTCATGTCTTATAATCATGTGGCAGAATTGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAGACTGCCACCTGCCTTTCATGTCTTATAATCATGTGGCAGAATTGG  600

seq1  GTTCAAGGACAGGGTGAGTGTGACAGAGGTGGCAGAGGACCCTAGTTCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCAAGGACAGGGTGAGTGTGACAGAGGTGGCAGAGGACCCTAGTTCAT  650

seq1  TGATGAATCCTATGTGTGAGTGTTCTTAACCATTTTATGACTTGAGAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAATCCTATGTGTGAGTGTTCTTAACCATTTTATGACTTGAGAAAT  700

seq1  ATTTTGGCTTCCAATTGCAATAATGGTAGCAATAATAGTAATAAAAATAA  750
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGGCTTTCAATTGCAATAATGGTAGCAATAATAGTAATAAAAATAA  750

seq1  TGAACAGTGATAACAACAATAATATGAATTATTCAGTTAGTGGATCCTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACAGTGATAACAACAATAATATGAATTATTCAGTTAGTGGATCCTAA  800

seq1  GTGAAATGCATTGTTCACAATGATGCTTTGTTTATTTGTCTGCTAAATGC  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  GTGAAATGCATTGTTCACAATGATGCTTTG-TTATTTGTCTGCTAAATGC  849

seq1  TCA-TTTGGTGATTCCTAAGTGCTGGGCACCCTGTAGGCGTGAACCCTCC  899
      ||| |||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCATTTTGGTGATTCCTAAGTGCTGGGCACCCTGTAGGCGTG-ACCCTCC  898

seq1  TTGAACACATAGAAGCCTCTGGCCTTGTAGCTTTAGGAGGCAGTTTTCAG  949
      ||| ||||||||||| ||||||||||||| ||||| ||||||||||||||
seq2  TTG-ACACATAGAAGTCTCTGGCCTTGTAACTTTAAGAGGCAGTTTTCAG  947

seq1  ATCGTGCCATAGCCTGTCTTAATTACAAGCATAACAATAGCTCCTGACCT  999
      |||||| |||||||||||| | | |||||||||||||||||| |||||||
seq2  ATCGTG-CATAGCCTGTCTAATTAACAAGCATAACAATAGCT-CTGACCT  995

seq1  ACTACCATTCATGGTCCCGAGCTATGGGAG-TATTTTTTTTTGTCATGTG  1048
      |||||||||||||||||||||||  ||||| |||||||||| ||||||||
seq2  ACTACCATTCATGGTCCCGAGCTTGGGGAGTTATTTTTTTTGGTCATGTG  1045

seq1  CCATGTGAATTCAGGATTGAGCAGGTTGAAACAGTGACCCAGTTCT  1094
      |   ||||||||||||||||||  ||||||||||  ||||||||||
seq2  CATGGTGAATTCAGGATTGAGC-CGTTGAAACAG-AACCCAGTTCT  1089