BAC Information

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BAC

Clone NameB6Ng01-063O05
Chromosome19 (Build37)
Map Location 3,523,760 - 3,635,574
singlet/doubletdoublet
Overlap geneSaps3, LOC100043581, Lrp5
Upstream geneLOC630980, LOC665804, EG665806, EG665810, LOC100039218, Ighmbp2, Mrpl21, LOC665826, Cpt1a, Mtl5, Gal
Downstream gene1810055G02Rik, LOC100039289, Suv420h1, Chka, Tcirg1, Ndufs8, Aldh3b1, Unc93b1, LOC100039337, 1700055N04Rik, Aldh3b2, Acy3, Tbx10, Nudt8, Doc2g, Ndufv1, Gstp1, Gstp2, BC021614, Cabp2, Cdk2ap2, Pitpnm1, Aip, Tmem134, Cabp4, Gpr152, Coro1b, Ptprcap, Rps6kb2, AI790298, Tbc1d10c, Ppp1ca, Rad9, Clcf1, Pold4, Ssh3, Ankrd13d, Adrbk1, Fbxl11, LOC100043628, Rhod, Syt12, 2010003K11Rik, Pcx, Lrfn4, Rce1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-063O05.bB6Ng01-063O05.g
ACCDH883844DH883845
length191830
definitionDH883844|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O05, 5' end.DH883845|Mus musculus domesticus DNA, BAC clone: B6Ng01-063O05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,523,760 - 3,523,951)(3,634,744 - 3,635,574)
sequence
attgtctactttccaggggtgcactgtccttcctcagtttgtaggcttga
aacacatgattgggggggggggggggtactgacatcaaaaaggtgtttaa
cgggtgacaccaactttactcactattttctaggacagtggtttgaatcc
ttcctaatctttttaccctttaatacagttcttcgtgctgt
gaattctgctgcactgcacacacagcatgctatttgcttgtggctttctt
aaggacaggctgagtttggagctgcctagtgccctgtgtgtggcgggtcc
ttagcagagtgtggcctatgggatggctctccccgcatatacttaagagc
atgtactgtccaccatgcttcagagtgagccctgctcactgcccagctgt
cccttctgcttagagtctctgccttccagcattgcccgagcctcctcctg
aatctcttatcccaacatcctgtgtatgagatccagtttgcacaccatgc
ctttcttgaggtaatcaaacaaagcagaggcatggtggatttggtgggtc
cacagagcagtgccctcctgtgagaaagaccgtagagacacacagtgcag
tcggctgtgtgaaactggaggcacggatcagagtggttggcaatgaacca
aagaacgccaagtatttccggcaatatcaggaactgaaggaggcaggaag
gaccctcccttagagcccagggagggaggtagccctgctgcacccacacc
ttgactcttgacttcggaaccccagataagggaaggaataaacttatctt
ggtaaagtcacaggtttagggtgtgaaggctgagccctgtgcctagcccc
tggccctacctgtgtgttcctgggtgaaatagagaaagacgccaggtgtc
tgtccacacagctaggtccaatggctgtcagtgcttcagagagggcaagg
cttcatttttggtaaagggccttgccaccaattttgaccacctcagttag
atccttggaacccaaggtttcttctgttct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_3523760_3523951
seq2: B6Ng01-063O05.b_53_243

seq1  ATTGTCTACTTTCCAGGGGTGCACTGTCCTTCCTCAGTTTGTAGGCTTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTCTACTTTCCAGGGGTGCACTGTCCTTCCTCAGTTTGTAGGCTTGA  50

seq1  AACACATGATTGGGGGGGGGGGGGGGCACCTGGCATCAAAAAGGTGTTTA  100
      |||||||||||||||||||||||||| | ||| |||||||||||||||||
seq2  AACACATGATTGGGGGGGGGGGGGGGTA-CTGACATCAAAAAGGTGTTTA  99

seq1  ACGGGTGACAGCAACTTTACTCACTATTTTCTAGGACAGTGGTTTTCAAC  150
      |||||||||| ||||||||||||||||||||||||||||||||||  | |
seq2  ACGGGTGACACCAACTTTACTCACTATTTTCTAGGACAGTGGTTTGAATC  149

seq1  CTTCCTAATCCTGCTACCCTTTAATACAGTTCTTCATGCTGT  192
      |||||||||| |  ||||||||||||||||||||| ||||||
seq2  CTTCCTAATCTTTTTACCCTTTAATACAGTTCTTCGTGCTGT  191

seq1: chr19_3634744_3635574
seq2: B6Ng01-063O05.g_67_896 (reverse)

seq1  AGAACAGAAGAAACCTTGGGTTCCAAGGATCTAACTGAGGTGGTCAAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACAGAAGAAACCTTGGGTTCCAAGGATCTAACTGAGGTGGTCAAAAT  50

seq1  TGGTGGCAAGGCCCTTTACCAAAAATGAAGCCTTGCCCTCTCCTGAAGCA  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  TGGTGGCAAGGCCCTTTACCAAAAATGAAGCCTTGCCCTCT-CTGAAGCA  99

seq1  CTGACAGCCATTGGACCTAGCTGTGTGGACAGACACCTGGCGTCTTTCTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACAGCCATTGGACCTAGCTGTGTGGACAGACACCTGGCGTCTTTCTC  149

seq1  TATTTCACCCAGGAACACACAGGTAGGGCCAGGGGCTAGGCACAGGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCACCCAGGAACACACAGGTAGGGCCAGGGGCTAGGCACAGGGCTC  199

seq1  AGCCTTCACACCCTAAACCTGTGACTTTACCAAGATAAGTTTATTCCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTCACACCCTAAACCTGTGACTTTACCAAGATAAGTTTATTCCTTC  249

seq1  CCTTATCTGGGGTTCCGAAGTCAAGAGTCAAGGTGTGGGTGCAGCAGGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTATCTGGGGTTCCGAAGTCAAGAGTCAAGGTGTGGGTGCAGCAGGGC  299

seq1  TACCTCCCTCCCTGGGCTCTAAGGGAGGGTCCTTCCTGCCTCCTTCAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCCCTCCCTGGGCTCTAAGGGAGGGTCCTTCCTGCCTCCTTCAGTT  349

seq1  CCTGATATTGCCGGAAATACTTGGCGTTCTTTGGTTCATTGCCAACCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGATATTGCCGGAAATACTTGGCGTTCTTTGGTTCATTGCCAACCACT  399

seq1  CTGATCCGTGCCTCCAGTTTCACACAGCCGACTGCACTGTGTGTCTCTAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATCCGTGCCTCCAGTTTCACACAGCCGACTGCACTGTGTGTCTCTAC  449

seq1  GGTCTTTCTCACAGGAGGGCACTGCTCTGTGGACCCACCAAATCCACCAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCTTTCTCACAGGAGGGCACTGCTCTGTGGACCCACCAAATCCACCAT  499

seq1  GCCTCTGCTTTGTTTGATTACCTCAAGAAAGGCATGGTGTGCAAACTGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGCTTTGTTTGATTACCTCAAGAAAGGCATGGTGTGCAAACTGGA  549

seq1  TCTCATACACAGGATGTTGGGATAAGAGATTCAGGAGGAGGCTCGGGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATACACAGGATGTTGGGATAAGAGATTCAGGAGGAGGCTCGGGCAA  599

seq1  TGCTGGAAGGCAGAGACTCTAAGCAGAAGGGACAGCTGGGCAGTGAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGAAGGCAGAGACTCTAAGCAGAAGGGACAGCTGGGCAGTGAGCAG  649

seq1  GGCTCACTCTGAAGCATGGTGGACAGTACATGCTCTTAAGTATATGCGGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCACTCTGAAGCATGGTGGACAGTACATGCTCTTAAGTATATGCGGG  699

seq1  GAGAGCCATCCCATAGGCCACACTCTGCTAAGGACCCGCCACACACAGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGCCATCCCATAGGCCACACTCTGCTAAGGACCCGCCACACACAGGG  749

seq1  CACTAGGCAGCTCCAAACTCAGCCTGTCCTTAAGAAAGCCACAAGCAAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTAGGCAGCTCCAAACTCAGCCTGTCCTTAAGAAAGCCACAAGCAAAT  799

seq1  AGCATGCTGTGTGTGCAGTGCAGCAGAATTC  831
      |||||||||||||||||||||||||||||||
seq2  AGCATGCTGTGTGTGCAGTGCAGCAGAATTC  830