BAC Information

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BAC

Clone NameB6Ng01-075F15
Chromosome19 (Build37)
Map Location 20,256,343 - 20,435,792
singlet/doubletdoublet
Overlap geneLOC100041541
Upstream geneLOC100042218
Downstream geneAnxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-075F15.bB6Ng01-075F15.g
ACCDH891935DH891936
length1,1051,124
definitionDH891935|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F15, 5' end.DH891936|Mus musculus domesticus DNA, BAC clone: B6Ng01-075F15, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,434,679 - 20,435,792)(20,256,343 - 20,257,478)
sequence
gaattcattgcagactgtccaatatggggcctcaagtaaaggcagcttcc
taaatgttcaggaattttatcattaaatcaaggctatatgtttgatacta
agagagtagatttagaaagggctatgaaagggaaatacccgggaagaaac
atacctattaggggttcatgaaatcaactaattttgcttatttccaggga
tctgcacatttcaaacatctgccctaaacacgatgtgttttctttgtatt
aaaataattactcttctcaggtttgtgaagataaaaggcaaatatctttc
ttggatcattctttagaaatagattataaacaagtcacaaaagtataaaa
gggaataaagacagaaggtatagtaaataaggacatgataaactgagaga
gtaataaacttatacaatttcccctcatcacatatggaattatttttttc
atttgttacttttttcttatttgttttttccacattggcaaatgcatttt
acatattcacagtcttgagaagttttgaactcacttttttccataaaagc
ctatagaccgatttctgttaattaaatatagtaaatatatgctaaggctc
tgtctgtaaaagatgaagacagaatcttacccactcgtcttaatgttacc
tgctctacaaatgtctgataattatatcataattttgagtttccctgata
attgcatttgcatatttaaatgtggacggtatttttaaatgattttgggt
cctcttaaaagaaaccctgatcttgttattgtggattgaacacatcacgg
gttgcttcctggtcataacagggaatctgtaggtgtttaactatgggttc
catcgaggttcgagcttgatcaagcccctggacagtggctctgatgcctc
ttgtgttttgcctctgaggctaaatggatagcttaagatttccattttcc
tttgtgcattatttgagatggcatagtatcagcatcttagcttagctttc
actgattctgtgactgggagcccatatttcacacctcctcacatctgatg
tgacagcttctttggtgagtcaatgagaatgtcactttttctcaatgttc
atgat
gaattccatagcttgacagcaaagttgaataccttcgaactcatacccat
tggggtaaatataaattttcagtcaacgaccagtttccaccaattgagag
gcactgcatagtgagcttcccgagattttcttgaattcagtgagaactga
ttaacccatttagatggagctaaacctatctttacatggagctaattatg
tactaatgcatacattcagtaatgccatgaggctgtccatctgcaaactg
ccagaaataagctgcccaaattcagagaagaacttattttaagactgaaa
aatgacacggatttaaagcttgcttttgctgatttgataaactgtaagtt
gaaacaattacattaatgtagcccatcttaaagccaatggtttttttttt
tttttctgaaaagaaagtgaaggaaaaagtaattgcttttaacttcacat
gtgagcacaataaagatgattttatatgctatttcctcagactgccttag
aattgctaccttagaaaatcgtgagtggcaaaggaagtagccgctagcct
catctcactaagtggatgcttccagaatgatctttaaggatgagaggaac
taagggttgggaagggaaattgtgttacttttaaatggttttctgaggtg
attgttttatctactgttggtaaaaatatcaacgggtatggatcaaaaat
ttgaggggcaattgatccactcgagtgatttaaatagacagaagagctat
accgaagcaaaataccgaactatccttgaggagtccaggacacgagaaaa
gggctaccataaagcatgatgcaaaataattagagaatcccgtgcctttt
ccaagaaaattctgtggcaaaagtcttgcccaaacagtcaaaggactgag
gaagatcagtagccagagccaaacccacctttctgaggaaccagacagat
cactcattttctgccctcttttacatcctcttggacagatctcttatttt
ttcctagtgtttctaaattagggatttagagttttgtctgaactaattaa
aggagtctctgatactaccacacttactagaatagtacatcacatatcta
tgctttatttatacatttgtgaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20434679_20435792
seq2: B6Ng01-075F15.b_48_1152 (reverse)

seq1  ATCATGGACATTGAGAAAAAGGTGAACATTTCTTCATGTGACTCACCAAA  50
      |||||| ||||||||||||| ||| |||||   |||| ||||||||||||
seq2  ATCATGAACATTGAGAAAAA-GTG-ACATT--CTCAT-TGACTCACCAAA  45

seq1  GAAGCCTGTCACATCAGATGGTGA-GAGGTGTGAAATATGGGGCTCCCAG  99
      |||| |||||||||||||| |||| |||||||||||||| ||||||||||
seq2  GAAG-CTGTCACATCAGAT-GTGAGGAGGTGTGAAATAT-GGGCTCCCAG  92

seq1  TCACAGAATTCAGTGAAAGCTAAGCTAAGATTGCTGATACTATGCCATCT  149
      |||||||| ||||||||||||||||||||| |||||||||||||||||||
seq2  TCACAGAA-TCAGTGAAAGCTAAGCTAAGA-TGCTGATACTATGCCATCT  140

seq1  CAAATAATGCACAAAGGAAAATGGAAATCTTAAGCTATCCATTTAGCCTC  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATAATGCACAAAGGAAAATGGAAATCTTAAGCTATCCATTTAGCCTC  190

seq1  AGAGGCAAAACACAAGAGGCATCAGAGCCACTGTCCAGGGGCTTGATCAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAAAACACAAGAGGCATCAGAGCCACTGTCCAGGGGCTTGATCAA  240

seq1  GCTCGAACCTCGATGGAACCCATAGTTAAACACCTACAGATTCCCTGTTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCGAACCTCGATGGAACCCATAGTTAAACACCTACAGATTCCCTGTTA  290

seq1  TGACCAGGAAGCAACCCCTGATGTGTTCAATCCACAATAACAAGATCAGG  349
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGACCAGGAAGCAACCCGTGATGTGTTCAATCCACAATAACAAGATCAGG  340

seq1  GTTTCTTTTAAGAGGACCCAAAATCATTTAAAAATACCGTCCACATTTAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTTTTAAGAGGACCCAAAATCATTTAAAAATACCGTCCACATTTAA  390

seq1  ATATGCAAATGCAATTATCAGGGAAACTCAAAATTATGATATAATTATCA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGCAAATGCAATTATCAGGGAAACTCAAAATTATGATATAATTATCA  440

seq1  GACATTTGTAGAGCAGGTAACATTAAGACGAGTGGGTAAGATTCTGTCTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATTTGTAGAGCAGGTAACATTAAGACGAGTGGGTAAGATTCTGTCTT  490

seq1  CATCTTTTACAGACAGAGCCTTAGCATATATTTACTATATTTAATTAACA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTTTTACAGACAGAGCCTTAGCATATATTTACTATATTTAATTAACA  540

seq1  GAAATCGGTCTATAGGCTTTTATGGAAAAAAGTGAGTTCAAAACTTCTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATCGGTCTATAGGCTTTTATGGAAAAAAGTGAGTTCAAAACTTCTCA  590

seq1  AGACTGTGAATATGTAAAATGCATTTGCCAATGTGGAAAAAACAAATAAG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTGTGAATATGTAAAATGCATTTGCCAATGTGGAAAAAACAAATAAG  640

seq1  AAAAAAGTAACAAATGAAAAAAATAATTCCATATGTGATGAGGGGAAATT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAGTAACAAATGAAAAAAATAATTCCATATGTGATGAGGGGAAATT  690

seq1  GTATAAGTTTATTACTCTCTCAGTTTATCATGTCCTTATTTACTATACCT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATAAGTTTATTACTCTCTCAGTTTATCATGTCCTTATTTACTATACCT  740

seq1  TCTGTCTTTATTCCCTTTTATACTTTTGTGACTTGTTTATAATCTATTTC  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTCTTTATTCCCTTTTATACTTTTGTGACTTGTTTATAATCTATTTC  790

seq1  TAAAGAATGATCCAAGAAAGATATTTGCCTTTTATCTTCACAAACCTGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAGAATGATCCAAGAAAGATATTTGCCTTTTATCTTCACAAACCTGAG  840

seq1  AAGAGTAATTATTTTAATACAAAGAAAACACATCGTGTTTAGGGCAGATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGTAATTATTTTAATACAAAGAAAACACATCGTGTTTAGGGCAGATG  890

seq1  TTTGAAATGTGCAGATCCCTGGAAATAAGCAAAATTAGTTGATTTCATGA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATGTGCAGATCCCTGGAAATAAGCAAAATTAGTTGATTTCATGA  940

seq1  ACCCCTAATAGGTATGTTTCTTCCCGGGTATTTCCCTTTCATAGCCCTTT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCCTAATAGGTATGTTTCTTCCCGGGTATTTCCCTTTCATAGCCCTTT  990

seq1  CTAAATCTACTCTCTTAGTATCAAACATATAGCCTTGATTTAATGATAAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATCTACTCTCTTAGTATCAAACATATAGCCTTGATTTAATGATAAA  1040

seq1  ATTCCTGAACATTTAGGAAGCTGCCTTTACTTGAGGCCCCATATTGGACA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTGAACATTTAGGAAGCTGCCTTTACTTGAGGCCCCATATTGGACA  1090

seq1  GTCTGCAATGAATTC  1114
      |||||||||||||||
seq2  GTCTGCAATGAATTC  1105

seq1: chr19_20256343_20257478
seq2: B6Ng01-075F15.g_69_1192

seq1  GAATTCCATAGCTTGACAGCAAAGTTGAATACCTTCGAACTCATACCCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAGCTTGACAGCAAAGTTGAATACCTTCGAACTCATACCCAT  50

seq1  TGGGGTAAATATAAATTTTCAGTCAACGACCAGTTTCCACCAATTGAGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGTAAATATAAATTTTCAGTCAACGACCAGTTTCCACCAATTGAGAG  100

seq1  GCACTGCATAGTGAGCTTCCCGAGATTTTCTTGAATTCAGTGAGAACTGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCATAGTGAGCTTCCCGAGATTTTCTTGAATTCAGTGAGAACTGA  150

seq1  TTAACCCATTTAGATGGAGCTAAACCTATCTTTACATGGAGCTAATTATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACCCATTTAGATGGAGCTAAACCTATCTTTACATGGAGCTAATTATG  200

seq1  TACTAATGCATACATTCAGTAATGCCATGAGGCTGTCCATCTGCAAACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAATGCATACATTCAGTAATGCCATGAGGCTGTCCATCTGCAAACTG  250

seq1  CCAGAAATAAGCTGCCCAAATTCAGAGAAGAACTTATTTTAAGACTGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGAAATAAGCTGCCCAAATTCAGAGAAGAACTTATTTTAAGACTGAAA  300

seq1  AATGACACGGATTTAAAGCTTGCTTTTGCTGATTTGATAAACTGTAAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACACGGATTTAAAGCTTGCTTTTGCTGATTTGATAAACTGTAAGTT  350

seq1  GAAACAATTACATTAATGTAGCCCATCTTAAAGCCAATGGTTTTTTTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACAATTACATTAATGTAGCCCATCTTAAAGCCAATGGTTTTTTTTTT  400

seq1  TTTTTCTGAAAAGAAAGTGAAGGAAAAAGTAATTGCTTTTAACTTCACAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCTGAAAAGAAAGTGAAGGAAAAAGTAATTGCTTTTAACTTCACAT  450

seq1  GTGAGCACAATAAAGATGATTTTATATGCTATTTCCTCAGACTGCCTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAGCACAATAAAGATGATTTTATATGCTATTTCCTCAGACTGCCTTAG  500

seq1  AATTGCTACCTTAGAAAATCGTGAGTGGCAAAGGAAGTAGCCGCTAGCCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGCTACCTTAGAAAATCGTGAGTGGCAAAGGAAGTAGCCGCTAGCCT  550

seq1  CATCTCACTAAGTGGATGCTTCCAGAATGATCTTTAAGGATGAGAGGAAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTCACTAAGTGGATGCTTCCAGAATGATCTTTAAGGATGAGAGGAAC  600

seq1  TAAGGGTTGGGAAGGGAAATTGTGTTACTTTTAAATGGTTTTCTGAGGTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGGTTGGGAAGGGAAATTGTGTTACTTTTAAATGGTTTTCTGAGGTG  650

seq1  ATTGTTTTATCTACTGTTGGTAAAAATATCAACGGGTATGGATCAAAAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTTATCTACTGTTGGTAAAAATATCAACGGGTATGGATCAAAAAT  700

seq1  TTGAGGGGCAATTGATCCACTCGAGTGATTTAAATAGACAGAAGAGCTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGGGGCAATTGATCCACTCGAGTGATTTAAATAGACAGAAGAGCTAT  750

seq1  ACCGAAGCAAAATACCGAACTATCCTTGAGGAGTCCAGGACACGAGAAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGAAGCAAAATACCGAACTATCCTTGAGGAGTCCAGGACACGAGAAAA  800

seq1  GGGCTACCATAAAGCATGATGCAAAATAATTAGAGAATCCCGTGCCTTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTACCATAAAGCATGATGCAAAATAATTAGAGAATCCCGTGCCTTTT  850

seq1  CCAAGAAAATTCTGTGGCAAAAGGTCTTGCCCAAACAGTCAAAGGACTGA  900
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCAAGAAAATTCTGTGGCAAAA-GTCTTGCCCAAACAGTCAAAGGACTGA  899

seq1  GGAAGATCAGTAGCCAGAGCCAAACCCACCTTTCTGAGGAACCAGAACAG  950
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  GGAAGATCAGTAGCCAGAGCCAAACCCACCTTTCTGAGGAACCAG-ACAG  948

seq1  ATCAACTCATTTTCTGCCCTCTATTACATCCTCTTGGACCAGATCTCTTA  1000
      ||| |||||||||||||||||| ||||||||||||||| |||||||||||
seq2  ATC-ACTCATTTTCTGCCCTCTTTTACATCCTCTTGGA-CAGATCTCTTA  996

seq1  TTTTTTCCTAGTGTTTCTAAATTAGGGAATTAGAGTTTTTGTCTTGAACT  1050
      |||||||||||||||||||||||||||| |||||| ||||||| ||||||
seq2  TTTTTTCCTAGTGTTTCTAAATTAGGGATTTAGAG-TTTTGTC-TGAACT  1044

seq1  AATTAAAGGAGTCTCTGATACTACCACACTTACTAAGAATTAAGTACATC  1100
      |||||||||||||||||||||||||||||||||| |||||  ||||||||
seq2  AATTAAAGGAGTCTCTGATACTACCACACTTACT-AGAAT--AGTACATC  1091

seq1  ACATATCCTATGCTTCTAATTTATACATTTGTGAAC  1136
      |||||| |||||||  | ||||||||||||||||||
seq2  ACATAT-CTATGCT--TTATTTATACATTTGTGAAC  1124