BAC Information

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BAC

Clone NameB6Ng01-076G12
Chromosome19 (Build37)
Map Location 20,165,088 - 20,166,237
singlet/doubletsinglet
Overlap genenone
Upstream geneRorb, LOC100042218
Downstream geneLOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076G12.bB6Ng01-076G12.g
ACCDH892681DH892682
length1,1151,162
definitionDH892681|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G12, 5' end.DH892682|Mus musculus domesticus DNA, BAC clone: B6Ng01-076G12, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagctctgagccccatttttaatggggttatttgattt
tctggagcccaccttcttgagttctttatatatattggatattagtcccc
tatccaatttgggataggtaaagatcctttcccaatttgttggtggcctt
tttgtcttattgatggtgtcttttgctttgcagaagctttgcaattttat
gaggtcccatttatcgattcttgatcttacagcacaagccattgctgttc
tattcaggaatttttcccctgtacccatatcttcgaggtttgcagccttg
tttttataatagccagaagctggaaagaacccagatgcccctcaacagag
gaatggatacagaaaatgtggtacatttacacaatggaatactactcagc
tattaaaaaaatgaatttatgaaattcctaggcaaatggatggacctgga
gggtatcatcctgagtgaagtaacccaatcacaaaggaactcacacaata
tgtactcactgataattggatattagcccagaaacttaggatacccaaga
tataagatacaacttgccaaacgcatgaaattcaagaagaatgaagacca
aagtgtggacactttaccctttcttagaaatgggaacaaaacacccatgg
aaggagttacagagacaaaatttggagctgtgacgaaaggatggaccatc
tagtgattgccatatgcagggatccatcccataatcagcttccaaatgct
gacaccattgcatacactagcaagattttgctgaaaggacccagatatag
ctctctcttgtgagactatgcgggggcctagcaaacacagaagtggagga
tcacagtcagctattggatgggtcacagtgcccccaatggaggagctaga
gaaattacccaaggagctaaagggaactgcaaccctataggtggaacaac
aatatgaactaaccagtacccgggagctcttgtctttagctgcattttgt
atcaaagatggcctagtcgaccatcactgcaagaagagcccattggactt
ttaactttatatgcccagtacaagggaacgccaggcaaaagggggagtgg
ggtgggttagggaat
gaattccatttgcaatttcatatattatttttaaaatccatattctgcac
agtagaaaacatatgtgatctttttctttttgagtctggctttgctagct
ttacatgatgagtttcatcttcatctattttccataaatgacagaagttt
gttcttcttgatggttgagtaaaagcccaatatgtacataaccacatttt
ctccctcatctcatatgctgaatgctttttttaaaggtgttttattttta
tttcatagaatgtccaatttttttttctttctgaaagcatctgaagtgtt
tgaggaattgcttagtgcaggattcacagtcaggcctcacatgaatcttt
cagcatatttcatttctaacattacagaagacaatgtcttgatgttcttt
gaggtgaaagtaacttctaagattggatgctagtaataaaaccagaggtc
taatattcgatacccaaaccaaagcaaacactgctacattttggcatgtc
tccaaaagctcaaagactcaaaaccatcttgccagttcacatattctaaa
aagcaatgttggcaacacactgctttgacttcattattgcccttactaat
gaatcaaaattctaagttgacagtataatgaaaatatgtaaattgttttc
ttttaagcatctacacttatcacaaaatattaattttagttttactatcc
ctttgagtatctctaatttcttgagttatagtaaacaattttagtattgt
tgtagaaaaataaatgtaaatattttatccagcagttcacttcagaatac
taagagataagccctttttaatctgtcaattcttgctttgcaagtatata
ttctgagaaagttgttcaaatacattcccatttataattatgaatttatc
ttatattgtcatagtgtttgactttcattagggtaaaaatctagaactta
aagtcaggctatattatcttctttcttcttaggcccccaaccatgactat
tttatagatctttctaacaacttaccatataagctaacaaatacctattc
ctcccattgttaatcaataattggctggaagggaagaggcgaacaagtct
tttaggcatttgtacattaaattcatggcttatataacaagggggaagac
tgggccagcttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20165088_20166237
seq2: B6Ng01-076G12.g_69_1230

seq1  GAATTCCATTTGCAATTTCATATATTATTTTTAAAATCCATATTCTGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATTTGCAATTTCATATATTATTTTTAAAATCCATATTCTGCAC  50

seq1  AGTAGAAAACATATGTGATCTTTTTCTTTTTGAGTCTGGCTTTGCTAGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGAAAACATATGTGATCTTTTTCTTTTTGAGTCTGGCTTTGCTAGCT  100

seq1  TTACATGATGAGTTTCATCTTCATCTATTTTCCATAAATGACAGAAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATGATGAGTTTCATCTTCATCTATTTTCCATAAATGACAGAAGTTT  150

seq1  GTTCTTCTTGATGGTTGAGTAAAAGCCCAATATGTACATAACCACATTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCTTCTTGATGGTTGAGTAAAAGCCCAATATGTACATAACCACATTTT  200

seq1  CTCCCTCATCTCATATGCTGAATGCTTTTTTTAAAGGTGTTTTATTTTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTCATCTCATATGCTGAATGCTTTTTTTAAAGGTGTTTTATTTTTA  250

seq1  TTTCATAGAATGTCCAATTTTTTTTTCTTTCTGAAAGCATCTGAAGTGTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATAGAATGTCCAATTTTTTTTTCTTTCTGAAAGCATCTGAAGTGTT  300

seq1  TGAGGAATTGCTTAGTGCAGGATTCACAGTCAGGCCTCACATGAATCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGAATTGCTTAGTGCAGGATTCACAGTCAGGCCTCACATGAATCTTT  350

seq1  CAGCATATTTCATTTCTAACATTACAGAAGACAATGTCTTGATGTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATATTTCATTTCTAACATTACAGAAGACAATGTCTTGATGTTCTTT  400

seq1  GAGGTGAAAGTAACTTCTAAGATTGGATGCTAGTAATAAAACCAGAGGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGTGAAAGTAACTTCTAAGATTGGATGCTAGTAATAAAACCAGAGGTC  450

seq1  TAATATTCGATACCCAAACCAAAGCAAACACTGCTACATTTTGGCATGTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATTCGATACCCAAACCAAAGCAAACACTGCTACATTTTGGCATGTC  500

seq1  TCCAAAAGCTCAAAGACTCAAAACCATCTTGCCAGTTCACATATTCTAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAAAAGCTCAAAGACTCAAAACCATCTTGCCAGTTCACATATTCTAAA  550

seq1  AAGCAATGTTGGCAACACACTGCTTTGACTTCATTATTGCCCTTACTAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAATGTTGGCAACACACTGCTTTGACTTCATTATTGCCCTTACTAAT  600

seq1  GAATCAAAATTCTAAGTTGACAGTATAATGAAAATATGTAAATTGTTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCAAAATTCTAAGTTGACAGTATAATGAAAATATGTAAATTGTTTTC  650

seq1  TTTTAAGCATCTACACTTATCACAAAATATTAATTTTAGTTTTACTATCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTAAGCATCTACACTTATCACAAAATATTAATTTTAGTTTTACTATCC  700

seq1  CTTTGAGTATCTCTAATTTCTTGAGTTATAGTAAACAATTTTAGTATTGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGAGTATCTCTAATTTCTTGAGTTATAGTAAACAATTTTAGTATTGT  750

seq1  TGTAGAAAAATAAATGTAAATATTTTATCCAGCAGTTCACTTCAGAATAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAAAATAAATGTAAATATTTTATCCAGCAGTTCACTTCAGAATAC  800

seq1  TAAGAGATAAGCCCTTTTTAATCTGTCAATTCTTGCTTTGCAAGTATATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGATAAGCCCTTTTTAATCTGTCAATTCTTGCTTTGCAAGTATATA  850

seq1  TTCTGAGAAAGTTGTTCAAATACATTCCCATTTATAATTATGAATTTATC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGAGAAAGTTGTTCAAATACATTCCCATTTATAATTATGAATTTATC  900

seq1  TTATATTGTCAATAGTGTTTGACTTTCATTA-GGTAAAAATCTAGAACTT  949
      |||||||||| |||||||||||||||||||| ||||||||||||||||||
seq2  TTATATTGTC-ATAGTGTTTGACTTTCATTAGGGTAAAAATCTAGAACTT  949

seq1  AAAGTCAGGCTATATTATCTTCTTTCTTCCTAGGCCCCCAACCATGACTA  999
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AAAGTCAGGCTATATTATCTTCTTTCTTCTTAGGCCCCCAACCATGACTA  999

seq1  -TTTATAGATC-TTCTAACAACATACCATATAAGCTAACAAATACCTA-T  1046
       |||||||||| |||||||||| ||||||||||||||||||||||||| |
seq2  TTTTATAGATCTTTCTAACAACTTACCATATAAGCTAACAAATACCTATT  1049

seq1  CCT-CCATTGTTAATCAATAATT-GCTGG-AGGGAAGAGGCG-ACAAGTC  1092
      ||| ||||||||||||||||||| ||||| |||||||||||| |||||||
seq2  CCTCCCATTGTTAATCAATAATTGGCTGGAAGGGAAGAGGCGAACAAGTC  1099

seq1  TTTTCAGCATTTGTACCATAAA-TCA-GGCTTATA-AACAAGGG---AGA  1136
      ||||  ||||||||||  |||| ||| |||||||| ||||||||   |||
seq2  TTTTAGGCATTTGTACATTAAATTCATGGCTTATATAACAAGGGGGAAGA  1149

seq1  CATGGGCCAGCTTT  1150
      | ||||||||||||
seq2  C-TGGGCCAGCTTT  1162