BAC Information

Click to search

BAC

Clone NameB6Ng01-077I21
Chromosome19 (Build37)
Map Location 32,870,892 - 33,012,528
singlet/doubletdoublet
Overlap genePten, B430203M17Rik
Upstream gene1810073H04Rik, Asah2, EG668042, Sgms1, 2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1
Downstream gene6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112, EG668114, EG329055, EG433241, LOC668127
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077I21.bB6Ng01-077I21.g
ACCDH893497DH893498
length1,141489
definitionDH893497|Mus musculus domesticus DNA, BAC clone: B6Ng01-077I21, 5' end.DH893498|Mus musculus domesticus DNA, BAC clone: B6Ng01-077I21, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(33,011,378 - 33,012,528)(32,870,892 - 32,871,386)
sequence
gaattctatacctgaaacagcagcccaacatatcctgagatgcggaaaat
tatctagaggactgtacgtgtggcatcgcactgtcactgtatgtacagtt
actttctcaagggctgatgaagagcctggatcatatcaccatgcaccaga
aagactaggagtgggctgtggaagctgcgtgtctaatttgttctttgagt
catgttgatgcctggatcttacaaatcactggcgggggcacttcttaata
tattccacatgtactgacaactgaccctcgcccacagaggtctacccaaa
ctcatgacttaaacaaccctggaggagcagaacagccagaggccaaatcc
cagcgtttttctcatgttcatgtttcagtgagttagtgttccctgaccta
aaagaggtaaataatgacaagtaaatagctcagaaggttttttataaggg
gttttgcattagcatattaataaaacaaagtttccaatacagacttaaaa
gcagtgagtcagataattccgtgttgtagagagcatgcctgtgtgttaca
gaatcagcaacaccattggcctctaggcactccatgctggctgtaaactc
ttcaaatactgacaattgaaaatatattcagggggctggtgagatggctc
agcgagtaagagcactcttctgaagttgctgctcttctgaaggtcctgag
ttcaaatcccagaaaccacatgaggctcacaatcacccgtaatgagatct
gacgccctcttctggtgtgtctgaagacagcaacagtgcacttaatctat
agttatttatatatatatatatatttcagatattgcccagtgtacccagt
gaggaagcaagatcactcgccagtaaaaaccactggtgtgaaaacagtac
ctggcctgactaagcctcaatcatcagtgtcttcccaccacctgctgcag
gaaacaacttgtttactctcacaacaattcagtgaagtaggcactcttct
tcccacttcgtagactggagggtcagcatagtaatttcttacttacacac
ctctgtccagattcgctcctgtcagccagtgggagagaggctccttcctc
tatcgtcagtcggagttccactgcgacctctggtgaaaagg
agagccagtcttgggtatatgagatcctgactcaaggaaaaccaaagagg
aagggaggaaagagaatatagaatatgtgatcttttgtatatgtgtcagt
tttcttcttcctatctcatttttaggtaagcagacatttagcagagtatt
tagcaaggatgcatacgtcatctaataaattttctcttttcaaaaacagt
acatcaggtaatacactaaaagaaaaacacatgtgtgtgtccgtgtctgt
gtgtgtgtgtgtgtgtgtgtgtgtgtgtgaatacagaagttaattcccct
caggtctgctccattgggctgtagtttatggataatttgttcaatctttg
tgtgaactgggttttgaaatacagttgagttgtacaaattccagatgccc
agtgcaggcccacagctatttatttggaagtcttggatcagttttatttt
ggtacatagaaaatttcagttttcaaaaaactaaaaaac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33011378_33012528
seq2: B6Ng01-077I21.b_48_1188 (reverse)

seq1  CCTTTCTCACCAAGCAGTCGCAGTGTGAACTCCGGACTGACGGACTGAGG  50
      ||||| ||||| ||  ||||||||| ||||||| ||||||| ||  ||||
seq2  CCTTT-TCACC-AGAGGTCGCAGTG-GAACTCC-GACTGAC-GATAGAGG  45

seq1  GAGGAGCCTCTCTCCCAACTTGCTGGCA-GAGCGAATACTGGACAGAGGT  99
       ||||||||||||||| ||| |||| || |||||||| ||||||||||||
seq2  AAGGAGCCTCTCTCCC-ACTGGCTGACAGGAGCGAAT-CTGGACAGAGGT  93

seq1  GGTGTTAGGTAAGAGATTTACTATGCTGACCCT-CAGTCTACGAAGTTGG  148
       ||| || |||||| | |||||||||||||||| |||||||||||| |||
seq2  -GTG-TAAGTAAGA-AATTACTATGCTGACCCTCCAGTCTACGAAG-TGG  139

seq1  GGAGAAGAGTGCCTACTTCACTGAATTGTTGTGAGAGTAAACAAGTTGTT  198
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGAAGAGTGCCTACTTCACTGAATTGTTGTGAGAGTAAACAAGTTGTT  189

seq1  TCCTTGCAGCAGGTGGTGGGAAGACACTGATGATTGAGGCTTAGTCAGGC  248
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCC-TGCAGCAGGTGGTGGGAAGACACTGATGATTGAGGCTTAGTCAGGC  238

seq1  CAGGTACTGTTTTCACACCAGTGGTTTTTAACTGGCGAGTGATCTTGCTT  298
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  CAGGTACTGTTTTCACACCAGTGGTTTTT-ACTGGCGAGTGATCTTGCTT  287

seq1  CCTCACTGGGTACACTGGGCAATATCTG-AATATATATATATATATAAAT  347
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CCTCACTGGGTACACTGGGCAATATCTGAAATATATATATATATATAAAT  337

seq1  AACTATAGATTAAGTGCACTGTTGCTGTCTTCAGACACACCAGAAGAGGG  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTATAGATTAAGTGCACTGTTGCTGTCTTCAGACACACCAGAAGAGGG  387

seq1  CGTCAGATCTCATTACGGGTGATTGTGAGCCTCATGTGGTTTCTGGGATT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTCAGATCTCATTACGGGTGATTGTGAGCCTCATGTGGTTTCTGGGATT  437

seq1  TGAACTCAGGACCTTCAGAAGAGCAGCAACTTCAGAAGAGTGCTCTTACT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACTCAGGACCTTCAGAAGAGCAGCAACTTCAGAAGAGTGCTCTTACT  487

seq1  CGCTGAGCCATCTCACCAGCCCCCTGAATATATTTTCAATTGTCAGTATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGAGCCATCTCACCAGCCCCCTGAATATATTTTCAATTGTCAGTATT  537

seq1  TGAAGAGTTTACAGCCAGCATGGAGTGCCTAGAGGCCAATGGTGTTGCTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGAGTTTACAGCCAGCATGGAGTGCCTAGAGGCCAATGGTGTTGCTG  587

seq1  ATTCTGTAACACACAGGCATGCTCTCTACAACACGGAATTATCTGACTCA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTGTAACACACAGGCATGCTCTCTACAACACGGAATTATCTGACTCA  637

seq1  CTGCTTTTAAGTCTGTATTGGAAACTTTGTTTTATTAATATGCTAATGCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTTTAAGTCTGTATTGGAAACTTTGTTTTATTAATATGCTAATGCA  687

seq1  AAACCCCTTATAAAAAACCTTCTGAGCTATTTACTTGTCATTATTTACCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCCTTATAAAAAACCTTCTGAGCTATTTACTTGTCATTATTTACCT  737

seq1  CTTTTAGGTCAGGGAACACTAACTCACTGAAACATGAACATGAGAAAAAC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGGTCAGGGAACACTAACTCACTGAAACATGAACATGAGAAAAAC  787

seq1  GCTGGGATTTGGCCTCTGGCTGTTCTGCTCCTCCAGGGTTGTTTAAGTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGATTTGGCCTCTGGCTGTTCTGCTCCTCCAGGGTTGTTTAAGTCA  837

seq1  TGAGTTTGGGTAGACCTCTGTGGGCGAGGGTCAGTTGTCAGTACATGTGG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGTTTGGGTAGACCTCTGTGGGCGAGGGTCAGTTGTCAGTACATGTGG  887

seq1  AATATATTAAGAAGTGCCCCCGCCAGTGATTTGTAAGATCCAGGCATCAA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATATTAAGAAGTGCCCCCGCCAGTGATTTGTAAGATCCAGGCATCAA  937

seq1  CATGACTCAAAGAACAAATTAGACACGCAGCTTCCACAGCCCACTCCTAG  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGACTCAAAGAACAAATTAGACACGCAGCTTCCACAGCCCACTCCTAG  987

seq1  TCTTTCTGGTGCATGGTGATATGATCCAGGCTCTTCATCAGCCCTTGAGA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTGGTGCATGGTGATATGATCCAGGCTCTTCATCAGCCCTTGAGA  1037

seq1  AAGTAACTGTACATACAGTGACAGTGCGATGCCACACGTACAGTCCTCTA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAACTGTACATACAGTGACAGTGCGATGCCACACGTACAGTCCTCTA  1087

seq1  GATAATTTTCCGCATCTCAGGATATGTTGGGCTGCTGTTTCAGGTATAGA  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATTTTCCGCATCTCAGGATATGTTGGGCTGCTGTTTCAGGTATAGA  1137

seq1  ATTC  1151
      ||||
seq2  ATTC  1141

seq1: chr19_32870892_32871386
seq2: B6Ng01-077I21.g_69_563

seq1  GAATTCAGAGCCAGTCTTGGGTATATGAGATCCTGACTCAAGGAAAACCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAGCCAGTCTTGGGTATATGAGATCCTGACTCAAGGAAAACCA  50

seq1  AAGAGGAAGGGAGGAAAGAGAATATAGAATATGTGATCTTTTGTATATGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGGAAGGGAGGAAAGAGAATATAGAATATGTGATCTTTTGTATATGT  100

seq1  GTCAGTTTTCTTCTTCCTATCTCATTTTTAGGTAAGCAGACATTTAGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCAGTTTTCTTCTTCCTATCTCATTTTTAGGTAAGCAGACATTTAGCAG  150

seq1  AGTATTTAGCAAGGATGCATACGTCATCTAATAAATTTTCTCTTTTCAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTAGCAAGGATGCATACGTCATCTAATAAATTTTCTCTTTTCAAA  200

seq1  AACAGTACATCAGGTAATACACTAAAAGAAAAACACATGTGTGTGTCCGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGTACATCAGGTAATACACTAAAAGAAAAACACATGTGTGTGTCCGT  250

seq1  GTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACAGAAGTTAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAATACAGAAGTTAAT  300

seq1  TCCCCTCAGGTCTGCTCCATTGGGCTGTAGTTTATGGATAATTTGTTCAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTCAGGTCTGCTCCATTGGGCTGTAGTTTATGGATAATTTGTTCAA  350

seq1  TCTTTGTGTGAACTGGGTTTTGAAATACAGTTGAGTTGTACAAATTCCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGTGTGAACTGGGTTTTGAAATACAGTTGAGTTGTACAAATTCCAG  400

seq1  ATGCCCAGTGCAGGCCCACAGCTATTTATTTGGAAGTCTTGGATCAGTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCCCAGTGCAGGCCCACAGCTATTTATTTGGAAGTCTTGGATCAGTTT  450

seq1  TATTTTGGTACATAGAAAATTTCAGTTTTCAAAAAACTAAAAAAC  495
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTGGTACATAGAAAATTTCAGTTTTCAAAAAACTAAAAAAC  495