BAC Information

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BAC

Clone NameB6Ng01-077N05
Chromosome19 (Build37)
Map Location 51,091,889 - 51,092,503
singlet/doubletsinglet
Overlap genenone
Upstream geneEG433251, Sorcs1
Downstream geneLOC100042924, LOC100042928, LOC668536, LOC100042936
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-077N05.g
ACCDH893700
length616
definitionDH893700|Mus musculus domesticus DNA, BAC clone: B6Ng01-077N05, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaattttaatccaactttcataacatgatggacaggccatcatt
ctcattatcaaaaaattcttaaatttatcttgtttaaagttcagcctcca
gttagctattccaggacaatatctatactattaaaacaataaaagtattt
cagtggatatatcttatttcatagtaattttatatgccttttaggcaatg
ttttgttagattgttatgagactgtagttaggactttcaaaactcaagtc
tgaattttatctctagtcttttttttttttttttttttttactgcattta
agatgagtgtggattagagatgggatttgggtagaaatggagttagggga
cgagtgtgctaactagtgaagaactggcagctattaaaagttcacttctt
ggacctttgtcctggttgaaaacaacagactttaaaaataaataaatatg
tgtgtatgcgtgtttatttgtatatgtttacttgtattgattaattcaaa
atggactaaagcagtggttctcaacctgttggtcagaaccccattgggag
ttgcatgacccttttactggggtcacctaagaaatcaggaaacgcagata
ttttatatcatgattc
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51091889_51092503
seq2: B6Ng01-077N05.g_70_685

seq1  GAATTCAAATTTTAATCCAACTTTCATAACATGATGGACAGGCCATCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATTTTAATCCAACTTTCATAACATGATGGACAGGCCATCATT  50

seq1  CTCATTATCAAAAAATTCTTAAATTTATCTTGTTTAAAGTTCAGCCTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCATTATCAAAAAATTCTTAAATTTATCTTGTTTAAAGTTCAGCCTCCA  100

seq1  GTTAGCTATTCCAGGACAATATCTATACTATTAAAACAATAAAAGTATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTATTCCAGGACAATATCTATACTATTAAAACAATAAAAGTATTT  150

seq1  CAGTGGATATATCTTATTTCATAGTAATTTTATATGCCTTTTAGGCAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGGATATATCTTATTTCATAGTAATTTTATATGCCTTTTAGGCAATG  200

seq1  TTTTGTTAGATTGTTATGAGACTGTAGTTAGGACTTTCAAAACTCAAGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTAGATTGTTATGAGACTGTAGTTAGGACTTTCAAAACTCAAGTC  250

seq1  TGAATTTTATCTCTAGTCTTTTTTTTTTTTTTTTTTTTTTACTGCATTTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATTTTATCTCTAGTCTTTTTTTTTTTTTTTTTTTTTTACTGCATTTA  300

seq1  AGATGAGTGTGGATTAGAGATGGCATTTGGGTAGAAATGGAGTTAGGGGA  350
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGATGAGTGTGGATTAGAGATGGGATTTGGGTAGAAATGGAGTTAGGGGA  350

seq1  CGAGTGTGCTAACTAGTGAAGAACTGGCAGCTATTAGAAGTTCACTTCTT  400
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  CGAGTGTGCTAACTAGTGAAGAACTGGCAGCTATTAAAAGTTCACTTCTT  400

seq1  GGACCTTTGTCCTGGTTGAAAACAACAGACTTTAAAAATAAATAAATATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACCTTTGTCCTGGTTGAAAACAACAGACTTTAAAAATAAATAAATATG  450

seq1  TGTGTATGCGTGTTTATTTGTATATGTTTACTTGTATTGATTAATTCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTATGCGTGTTTATTTGTATATGTTTACTTGTATTGATTAATTCAAA  500

seq1  ATGGACTAAAGCAGTGGTTCTCAACCTGTTGGTCAGAACCCCATTGGGAG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACTAAAGCAGTGGTTCTCAACCTGTTGGTCAGAACCCCATTGGGAG  550

seq1  TTGCATGACCCTTTTACTGGGGTCACCTAAGAAATCAGGAAACGCAGATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCATGACCCTTTTACTGGGGTCACCTAAGAAATCAGGAAACGCAGATA  600

seq1  -TTTATATCATGATTC  615
       |||||||||||||||
seq2  TTTTATATCATGATTC  616