BAC Information

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BAC

Clone NameB6Ng01-083H03
Chromosome19 (Build37)
Map Location 15,063,734 - 15,064,909
singlet/doubletsinglet
Overlap genenone
Upstream geneEG667433, Tle4, EG433225
Downstream geneEG635497, Pomc-ps1, LOC667482, Psat1, LOC100041424, Cep78
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-083H03.bB6Ng01-083H03.g
ACCDH897706DH897707
length1,1611,205
definitionDH897706|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H03, 5' end.DH897707|Mus musculus domesticus DNA, BAC clone: B6Ng01-083H03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcattatcctacttcaaagatacttgctcagctatgtgcattacta
ttctagtcacaatagctagaaaatggaaacaacttaaatttctctcattg
gacaaatcaatagtgaaactgtatacaccatggaatatatatgggtgact
tcaattttgaagaaaaaatccaatcatgaatttttaagatatttttaaaa
gatatcataatatatagtataaagaatatggttttacactaaacagtaat
gggttaaaattttgacatgtctacattttttctcttgaacttcatttatc
tgttcccagtttctttaactttaaaaatcatatttacattacaccatttt
ttaaagtaatgacgattaaggtgatggctcatggtagttgtccaattagc
tgttatccattattattttttaaaatagttattattcattatcattctta
cttctttgtatgattgggcatcaaaatctgtttaagggtggtcttgaatt
taactttctttttatcctaagtaacaggtgactaacaaccatttcctttt
aatcttagtatcacttgtcatatggtccatcttagaaggtctttttatca
attgtttcatatctgttttgacttataactttttccatataaaaaccact
ttactgaataatgtgacagcttggtaagtaaaggcatttgctacacaagc
ctgactaccagaacttgtgtaaaggagaaaggagaaaacctacatataaa
gccctcttctgacctccacatatgtgccatggtagcttggcacacatata
tgtaaacatatgcacaataagaaaggcaggcagtcatgcaagcagacttc
gcttgttcacatatcactcatgtgctgagtgcctccttggcaggatccag
cagtatttctcaagtttgatgcctgaagctggggtgtgtgagcttccaca
tttgctgaaaacttacaaaaggacaactcttccttcctatgaccaacctt
ggtgccgctaatactcgtcctgtagaactgcgtctgtatcacatacagtg
aatggctttaaaagaagtttgcatttttttaatattctgatagttaagca
gccggttcttagtcctggtgactgggtgacctgacatggtctataacact
gtcgatgaatg
gaattctctgtttagctctgtgcctcatttttaaattgaattattgtttt
tttggaggatagcttcttgagttctttatatattttggatattagtcctc
tattggatatggaattagtgaagattattttccaattcggcaggttgcca
atttgtcatattgactatgtcatttgccttacagaagcttttcagtttcg
tgagatcccatttattaattcctgatcttagagactgagccattggagtt
ctgtttaggaagtcaccccctccccacccccactaatgagttcaaggctc
tttcctactttgtcttctattcgattcagtgtatatgatttcatgttgag
gtccttgatacacttggacttgaactttgtgcaaggtgagaaatatggat
ctattttcatttttctacatactgaccaccagtgttagtccagcaccatt
tattgaagatgctttctgttttccattgtaaaattttggcttctttgtaa
aagtcaagtatccaaaggtgtttgagtttatgtctatgtcttcaattcca
ttccactaatcaacatgtctctctctgtatcaatgccatgtgtttttcat
cactatttttctgtagtacagcttgaggtcagggctggtgattctcccag
aagttcttttgttgataataattgtttccactatcctgggttcttgatgg
aaactatccttgacattaagggaaattccttgacttcccaagaaatactc
aaattgactatcaattttcatcatttgtaattcatcgataatatctcatc
taaaattaatgtaaataaacaaatatactatttgaaaatcctcagtctta
tcatataataatattcctatcttagaaaactagttgaaaatatatctatt
tgttttacttgaactataagaaataaactgagaggtctgcttttaaatgt
agaaatcacgtttgcaaacattgttatggtggaatataatcacattgaga
aaccttgttataagataatttgaaagacagttttgtatagaaagtcttta
ttatatatttagtgctactatttcttttatttatcatcataatgcatgca
aataacatgcttcttgtaagttttggaaccataccattgtttctcattac
tctattctaactcaattcctgctggcctgcctcatatttccctcaacgct
tgggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15063734_15064909
seq2: B6Ng01-083H03.b_49_1209

seq1  GAATTCATTATCCTACTTCAAAGATACTTGCTCAGCTATGTGCATTACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTATCCTACTTCAAAGATACTTGCTCAGCTATGTGCATTACTA  50

seq1  TTCTAGTCACAATAGCTAGAAAATGGAAACAACTTAAATTTCTCTCATTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAGTCACAATAGCTAGAAAATGGAAACAACTTAAATTTCTCTCATTG  100

seq1  GACAAATCAATAGTGAAACTGTATACACCATGGAATATATATGGGTGACT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAAATCAATAGTGAAACTGTATACACCATGGAATATATATGGGTGACT  150

seq1  TCAATTTTGAAGAAAAAATCCAATCATGAATTTTTAAGATATTTTTAAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTTGAAGAAAAAATCCAATCATGAATTTTTAAGATATTTTTAAAA  200

seq1  GATATCATAATATATAGTATAAAGAATATGGTTTTACACTAAACAGTAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCATAATATATAGTATAAAGAATATGGTTTTACACTAAACAGTAAT  250

seq1  GGGTTAAAATTTTGACATGTCTACATTTTTTCTCTTGAACTTCATTTATC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTTAAAATTTTGACATGTCTACATTTTTTCTCTTGAACTTCATTTATC  300

seq1  TGTTCCCAGTTTCTTTAACTTTAAAAATCATATTTACATTACACCATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCCAGTTTCTTTAACTTTAAAAATCATATTTACATTACACCATTTT  350

seq1  TTAAAGTAATGACGATTAAGGTGATGGCTCATGGTAGTTGTCCAATTAGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGTAATGACGATTAAGGTGATGGCTCATGGTAGTTGTCCAATTAGC  400

seq1  TGTTATCCATTATTATTTTTTAAAATAGTTATTATTCATTATCATTCTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTATCCATTATTATTTTTTAAAATAGTTATTATTCATTATCATTCTTA  450

seq1  CTTCTTTGTATGATTGGGCATCAAAATCTGTTTAAGGGTGGTCTTGAATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTTGTATGATTGGGCATCAAAATCTGTTTAAGGGTGGTCTTGAATT  500

seq1  TAACTTTCTTTTTATCCTAAGTAACAGGTGACTAACAACCATTTCCTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTCTTTTTATCCTAAGTAACAGGTGACTAACAACCATTTCCTTTT  550

seq1  AATCTTAGTATCACTTGTCATATGGTCCATCTTAGAAGGTCTTTTTATCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTAGTATCACTTGTCATATGGTCCATCTTAGAAGGTCTTTTTATCA  600

seq1  ATTGTTTCATATCTGTTTTGACTTATAACTTTTTCCATATAAAAACCACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTTTCATATCTGTTTTGACTTATAACTTTTTCCATATAAAAACCACT  650

seq1  TTACTGAATAATGTGACAGCTTGGTAAGTAAAGGCATTTGCTACACAAGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGAATAATGTGACAGCTTGGTAAGTAAAGGCATTTGCTACACAAGC  700

seq1  CTGACTACCAGAACTTGTGTAAAGGAGAAAGGAGAAAACCTACATATAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGACTACCAGAACTTGTGTAAAGGAGAAAGGAGAAAACCTACATATAAA  750

seq1  GCCCTCTTCTGACCTCCACATATGTGCCATGGTAGCTTGGCACACATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTCTTCTGACCTCCACATATGTGCCATGGTAGCTTGGCACACATATA  800

seq1  TGTAAACATATGCACAATAAGAAAGGCAGGCAGTCATGCAAGCAGACTTC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAAACATATGCACAATAAGAAAGGCAGGCAGTCATGCAAGCAGACTTC  850

seq1  GCTTGTTCACATATCACTCATGTGCTGAGTGCCTCCTTGGCAGGATCCAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTTCACATATCACTCATGTGCTGAGTGCCTCCTTGGCAGGATCCAG  900

seq1  CAGTATTTCTCAAGTTTGATGCCTGAAGCTGGGGTGTGTGAGCTTCCACA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTTCTCAAGTTTGATGCCTGAAGCTGGGGTGTGTGAGCTTCCACA  950

seq1  TTTGCTGAAAAACTTACAAAAGGACAACTCTTCCTTCCTATGACCAACCT  1000
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTG-AAAACTTACAAAAGGACAACTCTTCCTTCCTATGACCAACCT  999

seq1  TGGTG-CGCTAATACTCGTCCTGTAGAACTGCGTCTGTAATCACATACAG  1049
      ||||| |||||||||||||||||||||||||||||||| |||||||||||
seq2  TGGTGCCGCTAATACTCGTCCTGTAGAACTGCGTCTGT-ATCACATACAG  1048

seq1  TTGAATGGCTTTAAAAAGAAGTTTGCATTTTTTTTTAAATATTCTGATAG  1099
       ||||||||||| |||||||||||||||||||||   |||||||||||||
seq2  -TGAATGGCTTT-AAAAGAAGTTTGCATTTTTTT---AATATTCTGATAG  1093

seq1  TTAAGCAG-CGGTTCTTAGTCTTGGTTGACTGGGTTGACACTTGACATGG  1148
      |||||||| |||||||||||| ||| |||||||||    || ||||||||
seq2  TTAAGCAGCCGGTTCTTAGTCCTGG-TGACTGGGT---GACCTGACATGG  1139

seq1  TTCTTAATAACCAACACTGT-TCTGAATG  1176
       |||  ||    ||||||||   ||||||
seq2  -TCT--AT----AACACTGTCGATGAATG  1161