BAC Information

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BAC

Clone NameB6Ng01-093C19
Chromosome19 (Build37)
Map Location 33,766,763 - 33,767,925
singlet/doubletsinglet
Overlap genenone
Upstream geneAtad1, Pten, B430203M17Rik, 6530404N21Rik, LOC638381, EG668095, LOC628236, AI747699, EG668106, EG668112
Downstream geneEG668114, EG329055, EG433241, LOC668127, Lipf, Lipk, EG383462, Lipn, Ankrd22, Stambpl1, Acta2, Fas, Ch25h, Lipa, Ifit2, Ifit3, OTTMUSG00000016644, LOC667370, 2010002M12Rik, Ifit1, Slc16a12
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093C19.bB6Ng01-093C19.g
ACCDH904732DH904733
length1,1491,023
definitionDH904732|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C19, 5' end.DH904733|Mus musculus domesticus DNA, BAC clone: B6Ng01-093C19, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatttcctaatttgcagtgtaaataaataatttatctttgtgata
taatttcattctttcttaatgggtattttctgaaaatatgataattatcc
tacatattgaaaatttccatttctttctatttgatatagactgcaattaa
agattaaagacaaattttaaaaatctttacttataaaaatatcccagaaa
taatcatgcaaattttggatgaagtcagactaggttaactacattgataa
gtaggtacattcctcatgttccacatcctgccacacacacatgcccagac
agtgcgttggcagcaatatgtttagaccttacctcctgcagacatgttct
ctggtgctgcagcatgggagctccctcactccaaccctggcacttgattt
gacatgtgggacagttgctttttgacagacctaaagggaggatgaaaaca
ttcaggctcacttgggaaacaaatgactgcctctgaggtcaagacttact
ttcatctttgacatgtaaacagggtttcttagaaagaaacagaataaagt
ttgttagacggtttatggcgggaaataaaaattatcacactgtgaattag
accagaaggctaatattgtttaaattttaagtctttatctttaatagaag
ttccagtttctgtattgtgaaaatctaaagaccaaattgcataaaaatat
gacatttctcatttctgtaaagtgcctttgctatgtgtggtatccataaa
caaccacagatatctgtgttcagagtggctttaaaagatttctcataata
tcccagatgtatcttcacactgacaggccaaaatgctagattttctacca
aggagtacagattgtgtcattttatggatgaatacatgccttattttggc
tctcttcaaacatttcttttataaaccagattatgggaacatgagaaaaa
attaaacattgcttactgtcacatttcttatatgccattcctttccttgg
caaatactaactattgacatggcatgtgtatgtatatttatgtttggtta
ggttgggaataaatttgaaaataggcaattctgtatattagaatgacaga
attgatatagaatgggtcaattctatgaaatctatagaaacctcttgaa
gaattctcacctgaggaataccgaatggcagagaagcacttgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagaacaaaaactcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttatacaaccactctggaaatcagtctggcggttcctca
gaaaattggacatagtactacaggaggatccagtaatacctctcctgggc
atatatccagaagatgccgcaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagccccaaacc
taggatacccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaaattggga
acaaaacacctatggaaggagttacaaagacaaagtttggagctgagatg
aaaggatggaccatgtagagactgccatatccaggggatccaccccatat
cagcatccaaacgcttgacacattgcatacactagcaagatttaatcgaa
aggatcccagatgagctgtctcttgtgagactagccgggcctagcaaaca
caaaagtggatgctccagtcgctatgaatgatccacagggctcccatgga
gaagctagagaaagtaccatatgatctaagggactacaaccttattgtga
aatatgtttaactataccagtgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_33766763_33767925
seq2: B6Ng01-093C19.b_45_1193 (reverse)

seq1  TTCAAGAGTGTTTTCTAATAGATTTTTTCTAATAGAATTTGACCACATCT  50
      |||||||  | ||||| |||||||     | |||||| ||||||   |||
seq2  TTCAAGA--GGTTTCT-ATAGATT-----TCATAGAA-TTGACCCATTCT  41

seq1  ATATCAA-TCTGTCCAATTCTTATATACAGAATTGCCTATGTTTTCATAT  99
      ||||||| ||||||  ||||| |||||||||||||||||  |||||| ||
seq2  ATATCAATTCTGTC--ATTCTAATATACAGAATTGCCTA--TTTTCAAAT  87

seq1  TTATTCCCAACCTAACCAAACATTAAATATACATACACATGCCATGTCAA  149
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTATTCCCAACCTAACCAAACA-TAAATATACATACACATGCCATGTCAA  136

seq1  TAGTTAGTATTTGCCAAGGAAAGGAATGGCATATAAGAAATGTGACAGTA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTAGTATTTGCCAAGGAAAGGAATGGCATATAAGAAATGTGACAGTA  186

seq1  AGCAATGTTTAATTTTTTTCTCATGTTCCCATAATCTGGTTTATAAAAGA  249
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGCAATGTTTAA-TTTTTTCTCATGTTCCCATAATCTGGTTTATAAAAGA  235

seq1  AATGTTTGAAGAGAGCCAAAATAAGGCATGTATTCATCCATAAAATGACA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTGAAGAGAGCCAAAATAAGGCATGTATTCATCCATAAAATGACA  285

seq1  CAATCTGTACTCCTTGGTAGAAAATCTAGCATTTTGGCCTGTCAGTGTGA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATCTGTACTCCTTGGTAGAAAATCTAGCATTTTGGCCTGTCAGTGTGA  335

seq1  AGATACATCTGGGATATTATGAGAAATCTTTTAAAGCCACTCTGAACACA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACATCTGGGATATTATGAGAAATCTTTTAAAGCCACTCTGAACACA  385

seq1  GATATCTGTGGTTGTTTATGGATACCACACATAGCAAAGGCACTTTACAG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCTGTGGTTGTTTATGGATACCACACATAGCAAAGGCACTTTACAG  435

seq1  AAATGAGAAATGTCATATTTTTATGCAATTTGGTCTTTAGATTTTCACAA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGAGAAATGTCATATTTTTATGCAATTTGGTCTTTAGATTTTCACAA  485

seq1  TACAGAAACTGGAACTTCTATTAAAGATAAAGACTTAAAATTTAAACAAT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAAACTGGAACTTCTATTAAAGATAAAGACTTAAAATTTAAACAAT  535

seq1  ATTAGCCTTCTGGTCTAATTCACAGTGTGATAATTTTTATTTCCCGCCAT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCCTTCTGGTCTAATTCACAGTGTGATAATTTTTATTTCCCGCCAT  585

seq1  AAACCGTCTAACAAACTTTATTCTGTTTCTTTCTAAGAAACCCTGTTTAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCGTCTAACAAACTTTATTCTGTTTCTTTCTAAGAAACCCTGTTTAC  635

seq1  ATGTCAAAGATGAAAGTAAGTCTTGACCTCAGAGGCAGTCATTTGTTTCC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCAAAGATGAAAGTAAGTCTTGACCTCAGAGGCAGTCATTTGTTTCC  685

seq1  CAAGTGAGCCTGAATGTTTTCATCCTCCCTTTAGGTCTGTCAAAAAGCAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGAGCCTGAATGTTTTCATCCTCCCTTTAGGTCTGTCAAAAAGCAA  735

seq1  CTGTCCCACATGTCAAATCAAGTGCCAGGGTTGGAGTGAGGGAGCTCCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTCCCACATGTCAAATCAAGTGCCAGGGTTGGAGTGAGGGAGCTCCCA  785

seq1  TGCTGCAGCACCAGAGAACATGTCTGCAGGAGGTAAGGTCTAAACATATT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCAGCACCAGAGAACATGTCTGCAGGAGGTAAGGTCTAAACATATT  835

seq1  GCTGCCAACGCACTGTCTGGGCATGTGTGTGTGGCAGGATGTGGAACATG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCAACGCACTGTCTGGGCATGTGTGTGTGGCAGGATGTGGAACATG  885

seq1  AGGAATGTACCTACTTATCAATGTAGTTAACCTAGTCTGACTTCATCCAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATGTACCTACTTATCAATGTAGTTAACCTAGTCTGACTTCATCCAA  935

seq1  AATTTGCATGATTATTTCTGGGATATTTTTATAAGTAAAGATTTTTAAAA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGCATGATTATTTCTGGGATATTTTTATAAGTAAAGATTTTTAAAA  985

seq1  TTTGTCTTTAATCTTTAATTGCAGTCTATATCAAATAGAAAGAAATGGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTCTTTAATCTTTAATTGCAGTCTATATCAAATAGAAAGAAATGGAA  1035

seq1  ATTTTCAATATGTAGGATAATTATCATATTTTCAGAAAATACCCATTAAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAATATGTAGGATAATTATCATATTTTCAGAAAATACCCATTAAG  1085

seq1  AAAGAATGAAATTATATCACAAAGATAAATTATTTATTTACACTGCAAAT  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAATGAAATTATATCACAAAGATAAATTATTTATTTACACTGCAAAT  1135

seq1  TAGGAAATGAATTC  1163
      ||||||||||||||
seq2  TAGGAAATGAATTC  1149