BAC Information

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BAC

Clone NameB6Ng01-093P09
Chromosome19 (Build37)
Map Location 49,955,333 - 50,087,577
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC629448, Siah1-ps1
Downstream geneEG433251, Sorcs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P09.bB6Ng01-093P09.g
ACCDH905305DH905306
length7631,056
definitionDH905305|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P09, 5' end.DH905306|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,086,815 - 50,087,577)(49,955,333 - 49,956,385)
sequence
gaattctgttgacagtctaaccgaaaaccattcacagatttccacagcat
acacactactggttataagctaaatttggttttgttacagaggtcataat
aggttgatggcagccccatccgtgaacctgtgtttggctcaggaagggta
gaaagggaaacactggtgggtttctctgcaagactgttcttttggaatgg
actgatagaggaggagaaggcagagaacttggaaagagttggatgggaag
aaatgagaagggaaaagtcacagtgccctgcaagtgtttcccattgggaa
cctcagcagcagtcagtgagcttgagatgagaagagttattttatactaa
agtatctgcactgtgttcttcacaaatgaaattattaattaattacgcta
ttgtggctagatcaattatgcctttttacttcagagattattgtttcttg
tttgtttgtttgtttgttttgagatagggtttctctgtgtagctttggct
atcctagacttcactctgtagatcaggctggcctcaaatttgcagagctc
ctcctgcctcccaaatgctgagattaaaaccatgtatcaccattgcatag
aaaattattttctccttttctctaatgtaatattttattgattatttaga
aattgtacatcatgcaccctgatcacactcacttcccagtcctctcaacc
cttgtgacccccccccaccacttgccaaaggaggaggaatgaggaggagg
aggaggagaaaga
gaattcatgtacccatgctctaagtggtgtttggtagtctaatatattga
cttccatatgtgttctgacttcaaacatcagttttttaaaaacagaaact
taaatgaggtacacataaataaatactcagtatgtggcgaaagttgagct
ttgatttggggtattactgaaataggaatgtctgtcatttcttgttgcta
tttctcaaaatttccagcctttaaaaaatcttcgccccagtttatagtct
agcgactctatgaatcttgaattgcttctagtcatccatcttagatacag
ttttactttccctgtgccttaaactcatcattctttacagtatgttaatc
ggcttagccatctgctatccttcatctcacatgcatggtcatttccctca
ttgacagggacaattaaaagagggccagaagccaaaagattttataaaaa
cagtgaagtagaacaaatggaaaacacagggaactgaggactttgcataa
tattatcatctaggacattaagaaagctctcaggaattgcactaaatccc
tacatgccgaaggttgcacaaggacatgggggtggtaggtatcaatcagt
tctgtgttaggaccgagagaagacagagcctttgacccagccttttaatg
ttgcctaagtcttttctcaatgtttagttctctgttacttgaagggagtg
gaatgctaccacatatgccctttgagcacacgtatataaagttaaaaatt
attttctattgactcagaacagaagaatgtgcccatatttgccttaaaca
aatgaatgaacaaagaagactgttctagaagaaaaaaggatcaaagatgt
gatctatttcagtactttttgctcattgtgagagtctagaaatatatagt
acaatgtcaataatatttttatattaatatcttctctaaactctaaccat
ttattgatcttccaaacttaactatcttgcaactggctagaaaataacta
atatatgcaaggaatgaagataatggactaattatttattttttgtacaa
ctattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_50086815_50087577
seq2: B6Ng01-093P09.b_34_796 (reverse)

seq1  TCTTTCTCCTCCTCCTCCTCCTCATTCCTCCTCCTTTGGCAAGTGGTGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCTCCTCCTCCTCCTCCTCATTCCTCCTCCTTTGGCAAGTGGTGGG  50

seq1  GGGGGGTCACAAGGGTTGAGAGGACTGGGAAGTGAGTGTGATCAGGGTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGTCACAAGGGTTGAGAGGACTGGGAAGTGAGTGTGATCAGGGTGC  100

seq1  ATGATGTACAATTTCTAAATAATCAATAAAATATTACATTAGAGAAAAGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATGTACAATTTCTAAATAATCAATAAAATATTACATTAGAGAAAAGG  150

seq1  AGAAAATAATTTTCTATGCAATGGTGATACATGGTTTTAATCTCAGCATT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATAATTTTCTATGCAATGGTGATACATGGTTTTAATCTCAGCATT  200

seq1  TGGGAGGCAGGAGGAGCTCTGCAAATTTGAGGCCAGCCTGATCTACAGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAGGCAGGAGGAGCTCTGCAAATTTGAGGCCAGCCTGATCTACAGAG  250

seq1  TGAAGTCTAGGATAGCCAAAGCTACACAGAGAAACCCTATCTCAAAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTCTAGGATAGCCAAAGCTACACAGAGAAACCCTATCTCAAAACAA  300

seq1  ACAAACAAACAAACAAGAAACAATAATCTCTGAAGTAAAAAGGCATAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACAAACAAACAAGAAACAATAATCTCTGAAGTAAAAAGGCATAATT  350

seq1  GATCTAGCCACAATAGCGTAATTAATTAATAATTTCATTTGTGAAGAACA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAGCCACAATAGCGTAATTAATTAATAATTTCATTTGTGAAGAACA  400

seq1  CAGTGCAGATACTTTAGTATAAAATAACTCTTCTCATCTCAAGCTCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGCAGATACTTTAGTATAAAATAACTCTTCTCATCTCAAGCTCACTG  450

seq1  ACTGCTGCTGAGGTTCCCAATGGGAAACACTTGCAGGGCACTGTGACTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCTGCTGAGGTTCCCAATGGGAAACACTTGCAGGGCACTGTGACTTT  500

seq1  TCCCTTCTCATTTCTTCCCATCCAACTCTTTCCAAGTTCTCTGCCTTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTCTCATTTCTTCCCATCCAACTCTTTCCAAGTTCTCTGCCTTCTC  550

seq1  CTCCTCTATCAGTCCATTCCAAAAGAACAGTCTTGCAGAGAAACCCACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCTATCAGTCCATTCCAAAAGAACAGTCTTGCAGAGAAACCCACCA  600

seq1  GTGTTTCCCTTTCTACCCTTCCTGAGCCAAACACAGGTTCACGGATGGGG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTTCCCTTTCTACCCTTCCTGAGCCAAACACAGGTTCACGGATGGGG  650

seq1  CTGCCATCAACCTATTATGACCTCTGTAACAAAACCAAATTTAGCTTATA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCATCAACCTATTATGACCTCTGTAACAAAACCAAATTTAGCTTATA  700

seq1  ACCAGTAGTGTGTATGCTGTGGAAATCTGTGAATGGTTTTCGGTTAGACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGTAGTGTGTATGCTGTGGAAATCTGTGAATGGTTTTCGGTTAGACT  750

seq1  GTCAACAGAATTC  763
      |||||||||||||
seq2  GTCAACAGAATTC  763

seq1: chr19_49955333_49956385
seq2: B6Ng01-093P09.g_70_1125

seq1  GAATTCATGTACCCATGCTCTAAGTGGTGTTTGGTAGTCTAATATATTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATGTACCCATGCTCTAAGTGGTGTTTGGTAGTCTAATATATTGA  50

seq1  CTTCCATATGTGTTCTGACTTCAAACATCAGTTTTTTAAAAACAGAAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCATATGTGTTCTGACTTCAAACATCAGTTTTTTAAAAACAGAAACT  100

seq1  TAAATGAGGTACACATAAATAAATACTCAGTATGTGGCGAAAGTTGAGCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGAGGTACACATAAATAAATACTCAGTATGTGGCGAAAGTTGAGCT  150

seq1  TTGATTTGGGGTATTACTGAAATAGGAATGTCTGTCATTTCTTGTTGCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTGGGGTATTACTGAAATAGGAATGTCTGTCATTTCTTGTTGCTA  200

seq1  TTTCTCAAAATTTCCAGCCTTTAAAAAATCTTCGCCCCAGTTTATAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCAAAATTTCCAGCCTTTAAAAAATCTTCGCCCCAGTTTATAGTCT  250

seq1  AGCGACTCTATGAATCTTGAATTGCTTCTAGTCATCCATCTTAGATACAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCGACTCTATGAATCTTGAATTGCTTCTAGTCATCCATCTTAGATACAG  300

seq1  TTTTACTTTCCCTGTGCCTTAAACTCATCATTCTTTACAGTATGTTAATC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACTTTCCCTGTGCCTTAAACTCATCATTCTTTACAGTATGTTAATC  350

seq1  GGCTTAGCCATCTGCTATCCTTCATCTCACATGCATGGTCATTTCCCTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTAGCCATCTGCTATCCTTCATCTCACATGCATGGTCATTTCCCTCA  400

seq1  TTGACAGGGACAATTAAAAGAGGGCCAGAAGCCAAAAGATTTTATAAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACAGGGACAATTAAAAGAGGGCCAGAAGCCAAAAGATTTTATAAAAA  450

seq1  CAGTGAAGTAGAACAAATGGAAAACACAGGGAACTGAGGACTTTGCATAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGAAGTAGAACAAATGGAAAACACAGGGAACTGAGGACTTTGCATAA  500

seq1  TATTATCATCTAGGACATTAAGAAAGCTCTCAGGAATTGCACTAAATCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATCATCTAGGACATTAAGAAAGCTCTCAGGAATTGCACTAAATCCC  550

seq1  TACATGCCGAAGGTTGCACAAGGACATGGGGGTGGTAGGTATCAATCAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATGCCGAAGGTTGCACAAGGACATGGGGGTGGTAGGTATCAATCAGT  600

seq1  TCTGTGTTAGGACCGAGAGAAGACAGAGCCTTTGACCCAGCC-TTTAATG  649
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TCTGTGTTAGGACCGAGAGAAGACAGAGCCTTTGACCCAGCCTTTTAATG  650

seq1  TTGCCTAAGTCTTTTCTCAATG-TTAGTTCTCTGTTACTTGAAGGGAGTG  698
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  TTGCCTAAGTCTTTTCTCAATGTTTAGTTCTCTGTTACTTGAAGGGAGTG  700

seq1  GAATGCTACCACATATGCCCTTTGAGCACACGTATATAAAGTTAAAAATT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGCTACCACATATGCCCTTTGAGCACACGTATATAAAGTTAAAAATT  750

seq1  ATTTTCTATTGACTCAAGAACAGAAGAATGTGCCCATATTTGCCTTAAAC  798
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  ATTTTCTATTGACTC-AGAACAGAAGAATGTGCCCATATTTGCCTTAAAC  799

seq1  AAATGAATGAACAAAGAAGACTGTTCTAGAAGAAAAAAGGATCAAAGAAT  848
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATGAATGAACAAAGAAGACTGTTCTAGAAGAAAAAAGGATCAAAG-AT  848

seq1  GTGATCTATTTCAGTAC-TTTTGCTCATTGTGAGAGTCTAGAAATATATA  897
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  GTGATCTATTTCAGTACTTTTTGCTCATTGTGAGAGTCTAGAAATATATA  898

seq1  GTACAATGTCAATAATATTTTTATATTAATATCTTCTCTAAAACTCTAAC  947
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GTACAATGTCAATAATATTTTTATATTAATATCTTCTCT-AAACTCTAAC  947

seq1  CA-TTATTGATCTTTCAAAACTTACTATCTGGCAACTGGCTAGAAAATAA  996
      || ||||||||||| ||||  | ||||||| |||||||||||||||||||
seq2  CATTTATTGATCTTCCAAACTTAACTATCTTGCAACTGGCTAGAAAATAA  997

seq1  CTAATTATATGC-AGGAATG-AGATTAATGACT-ATTATTTTTTTTTTGT  1043
      |||| ||||||| ||||||| |||| |  |||| ||||||| ||||||||
seq2  CTAA-TATATGCAAGGAATGAAGATAATGGACTAATTATTTATTTTTTGT  1046

seq1  ACAACTATTT  1053
      ||||||||||
seq2  ACAACTATTT  1056