BAC Information

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BAC

Clone NameB6Ng01-093P10
Chromosome19 (Build37)
Map Location 20,431,949 - 20,551,962
singlet/doubletdoublet
Overlap geneAnxa1, LOC100041560, 1500015L24Rik
Upstream geneLOC100042218, LOC100041541
Downstream geneE030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-093P10.bB6Ng01-093P10.g
ACCDH905307DH905308
length1,158968
definitionDH905307|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P10, 5' end.DH905308|Mus musculus domesticus DNA, BAC clone: B6Ng01-093P10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(20,550,788 - 20,551,962)(20,431,949 - 20,432,916)
sequence
gaattcctataactttagagtcaatgataatctatgtaagctgaccataa
gctgagcaaagttttttaagtcataatatgtaagacaggaagacagatgc
agggtttaaatattcatatacattgtgacacacagctacttctgtctcta
aacctttcttagagcaacctacgagagtttttggtactatcaggaaaatg
aagacattattcattccaagactagtaagaaacattattcattccaagac
tagtgaaaaacattattcattccatgatgaacatgggcttaaaatctgcc
tagtccctatgttttccaaatatctttttaccctaattttagtttaagac
atttttgtatattgtagtctccacttttcaagtagagcttaacatttaga
tgtgaagtcaacccaaataaaatgagaagagataagaaccatttttaaaa
ggaagacaaaagagatctttaagcatttttattacataattcttttactg
taaaatctacaatgtttcaggactctgaatatgtggttatacagttgggg
cttttattcacatgcggctaccccagaaagttgaagactcaaactttaaa
caagcaatcaaatacaaatagcaaactgaaatgcaaatagcaaaagtagg
tttttataactcaacagactatgtcaacaaatgctacagggtgcatctca
ctacaaacataagacacaggatgaggatatgactgaggagtacagaagat
gtctgacaccaggaacaacaaatatgagaatcatataatatatagttctt
ttttcttgacgttattttcagagagtactggctgacttgaccccatggaa
ataaggatcctgcattgcaaggtttcaaatggaaggagcagaatgagaat
aagaagatataataagacaatacatatctggaactgggggtctgcataaa
ttgaagacatagccagcaatttaactcagaattgttccttttctaaagaa
aatacagtgactggagtagagcagagctgaggaaagtcatccagagactg
ccttaccaagggatcattccatcttgcagaaccaaacccagaacctattg
ctgattgccaagaagtgcttgcttgaatctacagattcatgcattccatc
aaattcca
gaattctgggaaggagatgtgcattatctcattagagattaattatactt
ccaattgttttagtaatctttaaagggaacctatcttcctagggatggcc
cttcctttctgagcaagtagttccttaaccaggtcattgacattcccaac
agaaattttgagtctctacctaggtcagggatttcactgtctgttgttgt
tgttgtcgtcattgttgttgttgttgttgttgttgttttacatttcaaat
ggtatccactttcctagtttcccctccacaaaccccctatattctccgtc
ctcccctctgcctctatgagggtcttctcccactggcccaccaactcctg
cctcagcggtctagcgttccctctatcctgagtcatcaagcctccacagg
accaatgggtttccctcccattgatgccagataagcaatcctctgctaca
tacccacctgtgtattctttggttggaggtttagtccctggggagtctgg
ttcattgatattgttgttcttcctatgaggttgcaaaccccttcaactct
tacagtccttaccctaacttccccattgagatccccacactcagtccaat
gtttggttgtgtatatccacagctgcattggtccagatctggtagagtct
ctcagggaatagctatactaggctcctgtcagtaagcacttcttgacatc
agcaatagtgtctgggtttggtgtcagcagatgggatggatccctaggtg
gggcaatctttagattttttttcccttcagtttctgctccattctttgtt
actgcatttccttttgactgaggaattctggattaatatttttgaggtgg
tgggtggccacatcccttaactgagagccgtgcctattcactggatatga
tctcaggcaagagaaaactctctgtgaagtagagcgagagagggatatgg
gagggaaaaaaggaggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20550788_20551962
seq2: B6Ng01-093P10.b_48_1205 (reverse)

seq1  TGGAATTTTGATGGGGATTGCATTGAATCTGTAGATTTCAGCAAGCACTT  50
      ||||| ||||||  ||| |||| ||||||||||||||  |||||||||||
seq2  TGGAA-TTTGAT--GGAATGCA-TGAATCTGTAGATTCAAGCAAGCACTT  46

seq1  CTTGGC-ATCAGCAATAGTGTCTGGGTTTGGTGTCTGC-AGATGGGATGG  98
      |||||| |||||||||||  |||||||||||| ||||| |||||| || |
seq2  CTTGGCAATCAGCAATAGGTTCTGGGTTTGGT-TCTGCAAGATGGAAT-G  94

seq1  ATCCCTTGGTAGGGCAGTCTCTGGATGGCCTTTCCTTCAGCCTCTGCTCT  148
      ||||||||||| |||||||||||||| | |||||| |||| |||||||||
seq2  ATCCCTTGGTAAGGCAGTCTCTGGAT-GACTTTCC-TCAG-CTCTGCTCT  141

seq1  ACT-CAGTCACTGTATTTTCTTTAG-ACAGGAACAATTCTGAGTTAAAAT  196
      ||| ||||||||||||||||||||| | ||||||||||||||||||||  
seq2  ACTCCAGTCACTGTATTTTCTTTAGAAAAGGAACAATTCTGAGTTAAA--  189

seq1  TTGCTTGGCTATGTCTTCAATTTATGCAGGACCCCCCAGTTCCAGATATT  246
      |||| ||||||||||||||||||||||||   |||||||||||||||| |
seq2  TTGC-TGGCTATGTCTTCAATTTATGCAG--ACCCCCAGTTCCAGATA-T  235

seq1  GTATTTGTCTTATTTATTATCTTCTTTATTCTTCATTCCTGCTCCTTCCA  296
      ||| ||||||||||   ||||||| |||||| ||||| ||||||||||||
seq2  GTA-TTGTCTTATT--ATATCTTC-TTATTC-TCATT-CTGCTCCTTCCA  279

seq1  TTTGAAACCTTGCAATGCAGGATCCTTATTTCCATGGGGTCAAGTCAGCC  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAACCTTGCAATGCAGGATCCTTATTTCCATGGGGTCAAGTCAGCC  329

seq1  AGTACTCTCTGAAAATAACGTCAAGAAAAAAGAACTATATATTATATGAT  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACTCTCTGAAAATAACGTCAAGAAAAAAGAACTATATATTATATGAT  379

seq1  TCTCATATTTGTTGTTCCTGGTGTCAGACATCTTCTGTACTCCTCAGTCA  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCATATTTGTTGTTCCTGGTGTCAGACATCTTCTGTACTCCTCAGTCA  429

seq1  TATCCTCATCCTGTGTCTTATGTTTGTAGTGAGATGCACCCTGTAGCATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCTCATCCTGTGTCTTATGTTTGTAGTGAGATGCACCCTGTAGCATT  479

seq1  TGTTGACATAGTCTGTTGAGTTATAAAAACCTACTTTTGCTATTTGCATT  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGACATAGTCTGTTGAGTTATAAAAACCTACTTTTGCTATTTGCATT  529

seq1  TCAGTTTGCTATTTGTATTTGATTGCTTGTTTAAAGTTTGAGTCTTCAAC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTTTGCTATTTGTATTTGATTGCTTGTTTAAAGTTTGAGTCTTCAAC  579

seq1  TTTCTGGGGTAGCCGCATGTGAATAAAAGCCCCAACTGTATAACCACATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGGGGTAGCCGCATGTGAATAAAAGCCCCAACTGTATAACCACATA  629

seq1  TTCAGAGTCCTGAAACATTGTAGATTTTACAGTAAAAGAATTATGTAATA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGAGTCCTGAAACATTGTAGATTTTACAGTAAAAGAATTATGTAATA  679

seq1  AAAATGCTTAAAGATCTCTTTTGTCTTCCTTTTAAAAATGGTTCTTATCT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGCTTAAAGATCTCTTTTGTCTTCCTTTTAAAAATGGTTCTTATCT  729

seq1  CTTCTCATTTTATTTGGGTTGACTTCACATCTAAATGTTAAGCTCTACTT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTCATTTTATTTGGGTTGACTTCACATCTAAATGTTAAGCTCTACTT  779

seq1  GAAAAGTGGAGACTACAATATACAAAAATGTCTTAAACTAAAATTAGGGT  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGTGGAGACTACAATATACAAAAATGTCTTAAACTAAAATTAGGGT  829

seq1  AAAAAGATATTTGGAAAACATAGGGACTAGGCAGATTTTAAGCCCATGTT  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGATATTTGGAAAACATAGGGACTAGGCAGATTTTAAGCCCATGTT  879

seq1  CATCATGGAATGAATAATGTTTTTCACTAGTCTTGGAATGAATAATGTTT  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCATGGAATGAATAATGTTTTTCACTAGTCTTGGAATGAATAATGTTT  929

seq1  CTTACTAGTCTTGGAATGAATAATGTCTTCATTTTCCTGATAGTACCAAA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTACTAGTCTTGGAATGAATAATGTCTTCATTTTCCTGATAGTACCAAA  979

seq1  AACTCTCGTAGGTTGCTCTAAGAAAGGTTTAGAGACAGAAGTAGCTGTGT  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCTCGTAGGTTGCTCTAAGAAAGGTTTAGAGACAGAAGTAGCTGTGT  1029

seq1  GTCACAATGTATATGAATATTTAAACCCTGCATCTGTCTTCCTGTCTTAC  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACAATGTATATGAATATTTAAACCCTGCATCTGTCTTCCTGTCTTAC  1079

seq1  ATATTATGACTTAAAAAACTTTGCTCAGCTTATGGTCAGCTTACATAGAT  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTATGACTTAAAAAACTTTGCTCAGCTTATGGTCAGCTTACATAGAT  1129

seq1  TATCATTGACTCTAAAGTTATAGGAATTC  1175
      |||||||||||||||||||||||||||||
seq2  TATCATTGACTCTAAAGTTATAGGAATTC  1158

seq1: chr19_20431949_20432916
seq2: B6Ng01-093P10.g_69_1036

seq1  GAATTCTGGGAAGGAGATGTGCATTATCTCATTAGAGATTAATTATACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGGAGATGTGCATTATCTCATTAGAGATTAATTATACTT  50

seq1  CCAATTGTTTTAGTAATCTTTAAAGGGAACCTATCTTCCTAGGGATGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGTTTTAGTAATCTTTAAAGGGAACCTATCTTCCTAGGGATGGCC  100

seq1  CTTCCTTTCTGAGCAAGTAGTTCCTTAACCAGGTCATTGACATTCCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTCTGAGCAAGTAGTTCCTTAACCAGGTCATTGACATTCCCAAC  150

seq1  AGAAATTTTGAGTCTCTACCTAGGTCAGGGATTTCACTGTCTGTTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTGAGTCTCTACCTAGGTCAGGGATTTCACTGTCTGTTGTTGT  200

seq1  TGTTGTCGTCATTGTTGTTGTTGTTGTTGTTGTTGTTTTACATTTCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCGTCATTGTTGTTGTTGTTGTTGTTGTTGTTTTACATTTCAAAT  250

seq1  GGTATCCACTTTCCTAGTTTCCCCTCCACAAACCCCCTATATTCTCCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCACTTTCCTAGTTTCCCCTCCACAAACCCCCTATATTCTCCGTC  300

seq1  CTCCCCTCTGCCTCTATGAGGGTCTTCTCCCACTGGCCCACCAACTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCTGCCTCTATGAGGGTCTTCTCCCACTGGCCCACCAACTCCTG  350

seq1  CCTCAGCGGTCTAGCGTTCCCTCTATCCTGAGTCATCAAGCCTCCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCGGTCTAGCGTTCCCTCTATCCTGAGTCATCAAGCCTCCACAGG  400

seq1  ACCAATGGGTTTCCCTCCCATTGATGCCAGATAAGCAATCCTCTGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGGTTTCCCTCCCATTGATGCCAGATAAGCAATCCTCTGCTACA  450

seq1  TACCCACCTGTGTATTCTTTGGTTGGAGGTTTAGTCCCTGGGGAGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCTGTGTATTCTTTGGTTGGAGGTTTAGTCCCTGGGGAGTCTGG  500

seq1  TTCATTGATATTGTTGTTCTTCCTATGAGGTTGCAAACCCCTTCAACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGATATTGTTGTTCTTCCTATGAGGTTGCAAACCCCTTCAACTCT  550

seq1  TACAGTCCTTACCCTAACTTCCCCATTGAGATCCCCACACTCAGTCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCCTTACCCTAACTTCCCCATTGAGATCCCCACACTCAGTCCAAT  600

seq1  GTTTGGTTGTGTATATCCACAGCTGCATTGGTCCAGATCTGGTAGAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTGTGTATATCCACAGCTGCATTGGTCCAGATCTGGTAGAGTCT  650

seq1  CTCAGGGAATAGCTATACTAGGCTCCTGTCAGTAAGCACTTCTTGACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAATAGCTATACTAGGCTCCTGTCAGTAAGCACTTCTTGACATC  700

seq1  AGCAATAGTGTCTGGGTTTGGTGTCAGCAGATGGGATGGATCCCTAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAATAGTGTCTGGGTTTGGTGTCAGCAGATGGGATGGATCCCTAGGTG  750

seq1  GGGCAATCTTTAGATTTTTTTTCCCTTCAGTTTCTGCTCCATTCTTTGTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAATCTTTAGATTTTTTTTCCCTTCAGTTTCTGCTCCATTCTTTGTT  800

seq1  ACTGCATTTCCTTTTGACTGAGGAATTCTGGATTAATATTTTTGAGGTGG  850
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  ACTGCATTTCCTTTTGACTGAGGAATTCTGGATTAATATTTTTGAGGT-G  849

seq1  GTGGGTGGCCACATCCCTTAACTGAGAGCCGTGCCTATCCACTGGATATG  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GTGGGTGGCCACATCCCTTAACTGAGAGCCGTGCCTATTCACTGGATATG  899

seq1  ATCTCAGGCAAGAGAAAACTCTCTGTGAAGTAGAGCGAGAGAGGGATATG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTCAGGCAAGAGAAAACTCTCTGTGAAGTAGAGCGAGAGAGGGATATG  949

seq1  GGAGGG-AGAAAGGAGGGA  968
      |||||| | |||||||| |
seq2  GGAGGGAAAAAAGGAGGAA  968