BAC Information

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BAC

Clone NameB6Ng01-098N07
Chromosome19 (Build37)
Map Location 32,252,513 - 32,398,438
singlet/doubletdoublet
Overlap geneSgms1
Upstream genePrkg1, 8430431K14Rik, 1810073H04Rik, Asah2, EG668042
Downstream gene2700046G09Rik, LOC100042138, LOC672490, LOC100042823, Minpp1, Papss2, Atad1, Pten, B430203M17Rik, 6530404N21Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-098N07.bB6Ng01-098N07.g
ACCDH908800DH908801
length1,1381,046
definitionDH908800|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N07, 5' end.DH908801|Mus musculus domesticus DNA, BAC clone: B6Ng01-098N07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,397,285 - 32,398,438)(32,252,513 - 32,253,564)
sequence
gaattcacttcctgctccacactggaaagggtgcttcgtcgtgctgtttg
ctgttgctttgctcttttggaattcgtgttcttttgctagttcagatttc
tagatcagagtccagtttctacaacaaatgtgcacagttttatgtatagc
ttcaaataaagcatattttctccttcggaacattttactaaaattttttg
taatcgtggtattcttttttgccacagtaaaaaggccgttccccttgccc
cccccccccccatgtagacaatcaccatcacttaaaaattaagagtagta
ggtcattgttcttgctttcgagtaacaaccgttcatttaaaattaaaaag
aaaatgttgaaaaattatttgtctacacttgcaaatgacaactattgatg
cttctttattctgtgatttaaatcagatctaacgaaaggtcagctctgcc
ttcttgagagtcatcattcatcggctctttcatgcttcttcttgcagatg
ttaaagcatttttaataattaacttcaaacccattggcaaagaacagtac
cctcgagtgaatattcaactggaaaatgcctctcaattgtacccagtagt
gtttgaactgtgtttgtatttgaacgctcgagcaaagtcaacagccctgc
aaggcatattacttcgcttttttaatattaactttgcttagatttgacgc
ccaccgagcaggaggtgggacggcagaacacacttagagcacagtcgcca
ctggaagactgggtacactggggacactggggacacgtgtcttcatgctt
ttgtctcagttctcagatgcattgactctcaccccagaatacaagcgttc
cccgtggttgatttgaacatgatgctggtgggtcccgtgttgattgctga
gcaaacaggaaggtaaatcctcaattctgtatttccttacttttttctct
ttcatattctcaaaactttagtttctttgggatttctggaggattactga
atagaaaacaccatttgggctcatttcagtgactcacaactgtgactatg
tctatgtgttccttggtggttctttgatcccacctgtgaggctgtattct
gggcctcgcattctgagaaccgtgacttcttacctgga
ttttacacaggatttatatgtcacaactagatgccatgctagtctttgaa
aaaagtgagagctggaacacagagggaaagcagaaagagggaaaacagaa
caagaattgcctaaggattcaagtccagggtgatatgtccctttaaatgt
gagtggccacctggaacagtgtcaggctgccatgggcttaccatagccca
tcttcttggaaatctctgttgctgggacactggataaaccctgttaatac
cagtagtcttggcagggcatcaaggaagatggtgaacagctgcctccctt
aagaccacagcagacattttcgctaccagtccagggggcaagctccttcc
ctctggagccctgagactttcctaagtgccaacactccagtgctcttcag
aaagactcggcaagtcaccaagatctagcagagcacacagatggactctt
caggtttgttcctacacatggagactcaggtttctagaatacagatttag
aacaaaaccaaaaccaaacctaccctgatggctgtggaggcacaagcctt
taatcccagcactcaggaggcagaggcaggtggtgatcggttgagctgga
ggtcagcctggtatacagtgagttccaggacagcaggaatacacagtgaa
aacctatcttgaaaaatcaaaccagaaacaacaacagaaaacatttccta
atattgtaaacgcagttaaagacagcaaccatgagctctagaaaagagtc
tgacatggcctgaccaatctgcagctggtttctaaaaacccagactagaa
agatgcctgaagttcttagtttgtctgtgatactaggctcctctaaggtc
atgagactcagtgtagaaaccttccttgctgtcacctacttgcccagccc
caacctggacactatgagaggctgcattggactgaggcatgatggctcag
agacattcagactcagtgcccaaatatcaacatgccgcctcccggaacgt
cacaccgagatttacttactagcatttactctgagcttcgttcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_32397285_32398438
seq2: B6Ng01-098N07.b_47_1184 (reverse)

seq1  TCCAGGTAAGACAGTCACGTGTCCTCAGGAATGCAGGGCCCAGGATACAG  50
      ||||||||||| ||||||| || |||| ||||||  ||||||| ||||||
seq2  TCCAGGTAAGA-AGTCACG-GTTCTCA-GAATGCGAGGCCCAGAATACAG  47

seq1  CCTTCACAGGTGTGATCAGAGAGACCACAAAGGAACACATAGACATAGTC  100
      || ||||||||| ||||| ||| ||||| |||||||||||||||||||||
seq2  CC-TCACAGGTGGGATCAAAGA-ACCACCAAGGAACACATAGACATAGTC  95

seq1  ACAGTTGTGAAGTTCACCTGAAATGAAGCCCAAATGGTGTTTTTCTATTC  150
      ||||||||||   ||| |||||||| ||||||||||||| ||||||||||
seq2  ACAGTTGTGA--GTCA-CTGAAATG-AGCCCAAATGGTG-TTTTCTATTC  140

seq1  AGTAATTCCTTCCAGAAATTCCCAAAGAAACTTAAAGGTTTTGAGAATAT  200
      ||||||  | |||||||| |||||||||||||  || |||||||||||| 
seq2  AGTAAT--CCTCCAGAAA-TCCCAAAGAAACT--AAAGTTTTGAGAATA-  184

seq1  TGAAAGAGAAAAAAGTAAGGAAATACAGAATTGAGGATTTACCTTCCTGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAGAGAAAAAAGTAAGGAAATACAGAATTGAGGATTTACCTTCCTGT  234

seq1  TTGCTCAGCAATCAACACGGGACCCACCAGCATCATGTTCAAATCAACCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCAGCAATCAACACGGGACCCACCAGCATCATGTTCAAATCAACCA  284

seq1  CGGGGAACGCTTGTATTCTGGGGTGAGAGTCAATGCATCTGAGAACTGAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGGAACGCTTGTATTCTGGGGTGAGAGTCAATGCATCTGAGAACTGAG  334

seq1  ACAAAAGCATGAAGACACGTGTCCCCAGTGTCCCCAGTGTACCCAGTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGCATGAAGACACGTGTCCCCAGTGTCCCCAGTGTACCCAGTCTT  384

seq1  CCAGTGGCGACTGTGCTCTAAGTGTGTTCTGCCGTCCCACCTCCTGCTCG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGGCGACTGTGCTCTAAGTGTGTTCTGCCGTCCCACCTCCTGCTCG  434

seq1  GTGGGCGTCAAATCTAAGCAAAGTTAATATT-AAAAAGCGAAGTAATATG  499
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GTGGGCGTCAAATCTAAGCAAAGTTAATATTAAAAAAGCGAAGTAATATG  484

seq1  CCTTGCAGGGCTGTTGACTTTGCTCGAGCGTTCAAATACAAACACAGTTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGCAGGGCTGTTGACTTTGCTCGAGCGTTCAAATACAAACACAGTTC  534

seq1  AAACACTACTGGGTACAATTGAGAGGCATTTTCCAGTTGAATATTCACTC  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACACTACTGGGTACAATTGAGAGGCATTTTCCAGTTGAATATTCACTC  584

seq1  GAGGGTACTGTTCTTTGCCAATGGGTTTGAAGTTAATTATTAAAAATGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTACTGTTCTTTGCCAATGGGTTTGAAGTTAATTATTAAAAATGCT  634

seq1  TTAACATCTGCAAGAAGAAGCATGAAAGAGCCGATGAATGATGACTCTCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACATCTGCAAGAAGAAGCATGAAAGAGCCGATGAATGATGACTCTCA  684

seq1  AGAAGGCAGAGCTGACCTTTCGTTAGATCTGATTTAAATCACAGAATAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGCAGAGCTGACCTTTCGTTAGATCTGATTTAAATCACAGAATAAA  734

seq1  GAAGCATCAATAGTTGTCATTTGCAAGTGTAGACAAATAATTTTTCAACA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCATCAATAGTTGTCATTTGCAAGTGTAGACAAATAATTTTTCAACA  784

seq1  TTTTCTTTTTAATTTTAAATGAACGGTTGTTACTCGAAAGCAAGAACAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTTTTAATTTTAAATGAACGGTTGTTACTCGAAAGCAAGAACAAT  834

seq1  GACCTACTACTCTTAATTTTTAAGTGATGGTGATTGTCTACATGGGGGGG  899
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GACCTACTACTCTTAATTTTTAAGTGATGGTGATTGTCTACAT-GGGGGG  883

seq1  GGGGGGGGCAAGGGGAACGGCCTTTTTACTGTGGCAAAAAAGAATACCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGGGGCAAGGGGAACGGCCTTTTTACTGTGGCAAAAAAGAATACCAC  933

seq1  GATTACAAAAAATTTTAGTAAAATGTTCCGAAGGAGAAAATATGCTTTAT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTACAAAAAATTTTAGTAAAATGTTCCGAAGGAGAAAATATGCTTTAT  983

seq1  TTGAAGCTATACATAAAACTGTGCACATTTGTTGTAGAAACTGGACTCTG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGCTATACATAAAACTGTGCACATTTGTTGTAGAAACTGGACTCTG  1033

seq1  ATCTAGAAATCTGAACTAGCAAAAGAACACGAATTCCAAAAGAGCAAAGC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAAATCTGAACTAGCAAAAGAACACGAATTCCAAAAGAGCAAAGC  1083

seq1  AACAGCAAACAGCACGACGAAGCACCCTTTCCAGTGTGGAGCAGGAAGTG  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAGCAAACAGCACGACGAAGCACCCTTTCCAGTGTGGAGCAGGAAGTG  1133

seq1  AATTC  1154
      |||||
seq2  AATTC  1138

seq1: chr19_32252513_32253564
seq2: B6Ng01-098N07.g_78_1123

seq1  TTTTACACAGGATTTATATGTCACAACTAGATGCCATGCTAGTCTTTGAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACACAGGATTTATATGTCACAACTAGATGCCATGCTAGTCTTTGAA  50

seq1  AAAAGTGAGAGCTGGAACACAGAGGGAAAGCAGAAAGAGGGAAAACAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTGAGAGCTGGAACACAGAGGGAAAGCAGAAAGAGGGAAAACAGAA  100

seq1  CAAGAATTGCCTAAGGATTCAAGTCCAGGGTGATATGTCCCTTTAAATGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATTGCCTAAGGATTCAAGTCCAGGGTGATATGTCCCTTTAAATGT  150

seq1  GAGTGGCCACCTGGAACAGTGTCAGGCTGCCATGGGCTTACCATAGCCCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGGCCACCTGGAACAGTGTCAGGCTGCCATGGGCTTACCATAGCCCA  200

seq1  TCTTCTTGGAAATCTCTGTTGCTGGGACACTGGATAAACCCTGTTAATAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCTTGGAAATCTCTGTTGCTGGGACACTGGATAAACCCTGTTAATAC  250

seq1  CAGTAGTCTTGGCAGGGCATCAAGGAAGATGGTGAACAGCTGCCTCCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGTCTTGGCAGGGCATCAAGGAAGATGGTGAACAGCTGCCTCCCTT  300

seq1  AAGACCACAGCAGACATTTTCGCTACCAGTCCAGGGGGCAAGCTCCTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCACAGCAGACATTTTCGCTACCAGTCCAGGGGGCAAGCTCCTTCC  350

seq1  CTCTGGAGCCCTGAGACTTTCCTAAGTGCCAACACTCCAGTGCTCTTCAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGAGCCCTGAGACTTTCCTAAGTGCCAACACTCCAGTGCTCTTCAG  400

seq1  AAAGACTCGGCAAGTCACCAAGATCTAGCAGAGCACACAGATGGACTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACTCGGCAAGTCACCAAGATCTAGCAGAGCACACAGATGGACTCTT  450

seq1  CAGGTTTGTTCCTACACATGGAGACTCAGGTTTCTAGAATACAGATTTAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTTTGTTCCTACACATGGAGACTCAGGTTTCTAGAATACAGATTTAG  500

seq1  AACAAAACCAAAACCAAACCTACCCTGATGGCTGTGGAGGCACAAGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAACCAAAACCAAACCTACCCTGATGGCTGTGGAGGCACAAGCCTT  550

seq1  TAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGTGATCGGTTGAGCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCAGCACTCAGGAGGCAGAGGCAGGTGGTGATCGGTTGAGCTGGA  600

seq1  GGTCAGCCTGGTATACAGTGAGTTCCAGGACAGCAGGAATACACAGTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTCAGCCTGGTATACAGTGAGTTCCAGGACAGCAGGAATACACAGTGAA  650

seq1  AACCTATCTTGAAAAATCAAACCAGAAACAACAACAGAAAACATTTCCTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTATCTTGAAAAATCAAACCAGAAACAACAACAGAAAACATTTCCTA  700

seq1  ATATTGTAAACGCAGTTAAAGACAGCAACCATGAGCTCTAGAAAAGAGTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTGTAAACGCAGTTAAAGACAGCAACCATGAGCTCTAGAAAAGAGTC  750

seq1  TGACATGGCCTGACCAATCTGCAGCTGGTTTCTAAAAACCCAGACTAGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATGGCCTGACCAATCTGCAGCTGGTTTCTAAAAACCCAGACTAGAA  800

seq1  AGATGCCTGAAGTTCTTAGTTTGTCTGTGATACTAAGGCTCCTCTAAGGT  850
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  AGATGCCTGAAGTTCTTAGTTTGTCTGTGATACT-AGGCTCCTCTAAGGT  849

seq1  CATGAGACTCAGTGTAGAAACCTTCC-TGCTGTCACCTACTTGCCCCAGC  899
      |||||||||||||||||||||||||| |||||||||||||||| ||||||
seq2  CATGAGACTCAGTGTAGAAACCTTCCTTGCTGTCACCTACTTG-CCCAGC  898

seq1  CCCAACCTGGACACTATGAGAGGCTGCATTGGACTGAGGCATGAATGGCT  949
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CCCAACCTGGACACTATGAGAGGCTGCATTGGACTGAGGCATG-ATGGCT  947

seq1  CAGAGACCATTCAGAACTCAGTGCCCAAATATTAACATGCCGCCTCCCGG  999
      |||||| ||||||| ||||||||||||||||| |||||||||||||||||
seq2  CAGAGA-CATTCAG-ACTCAGTGCCCAAATATCAACATGCCGCCTCCCGG  995

seq1  AAACGTCAACACCGAGATTTACTTACTAGCATTTACTCTGAGCTTCGTTC  1049
       |||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  -AACGTC-ACACCGAGATTTACTTACTAGCATTTACTCTGAGCTTCGTTC  1043

seq1  AAG  1052
      |||
seq2  AAG  1046