BAC Information

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BAC

Clone NameB6Ng01-110G11
Chromosome19 (Build37)
Map Location 36,032,834 - 36,033,773
singlet/doubletsinglet
Overlap geneHtr7
Upstream geneMphosph1, LOC383464, LOC100042292, A830019P07Rik
Downstream geneRpp30, Ankrd1, LOC668195, Pcgf5, LOC668201, Hectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-110G11.bB6Ng01-110G11.g
ACCDH917035DH917036
length1,250942
definitionDH917035|Mus musculus domesticus DNA, BAC clone: B6Ng01-110G11, 5' end.DH917036|Mus musculus domesticus DNA, BAC clone: B6Ng01-110G11, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatacaaatttcatgatgccattttttaagcagctgagtaatact
ctattgtgtaaatgagccacattttctttactcattattctgttgaggaa
catctaagttgttcccagtttctagctattatggataaagctggaaggaa
catggttgagcaagtatccttgtggtagaatggaacatcctttgggtata
tgcccaagagtactatagctggatcttgaggtagatcaacttccatcttt
ctgagaaactgccatattgattttcaaagtaactatacaagtttacactc
ccactagcaatggaggagagttctgacctcctccatatcctcaccagcat
gagttgtcgctgtgttattggtcttagctattctgataggtataagagag
aatcccaaaataattttgatttgcatatccctgatagctaaggattttaa
acatttaagtgtttctcagcaattttagtttcctctattgagaagtttct
gtttagatttttacccaatttttaaatgaattatctgggttttttatatc
tagtttcctaatatctttatatattttggatattatttatattgcatatc
tggagttggtaaacatcttttgctattctgtatgttgttgtcttgtctga
tcgatggtaccctttgccttacagaagcttttcagttgcatgacgtccca
tttattaattgttgtccttggtgcctgcattatcaatgttatctcctgtg
ctaatagatagaaagctattccctactttctcttctatcatgttcactgc
atctggttttatattgaaatctttgatctacttggacttgagttctgtgt
agagtgatagatatagatccatttgtattcttctacatgcagccatccaa
ttagaccaataccatttgttgaaaatgctgtcttttttccagtgtgtatt
ccaagattcttcatccaaattcagtgaccgtacatccatatgtatgtgga
tttatgcctgggtcttattggagtcatgatcagcatgtctattttatgca
tatcatcagtttattaccgtagctttgtcttacaactgaactggaatcgg
aacctccagcagttctttattgttccaatgtttaagaatccggatttttg
ttatcagggaattggaacactactttcaagcctgtaagttgttggtattg
atgtgatttcgaactaatggctttctccctcaacgacaggtaggtgggct

gaattctgtcccttaactccctcccaccaataaaaatggtcaaagttaag
gacagataaggaaacagaaaggttttttttgtggatagtatcatttaaat
gttactatgtagtagtctgggtgaaggagagggaaaggcacagatcagaa
gagtacccatgcctacaaggggacatgaatgaaaacctttatttgataaa
aagagaactgaaagagaatattattttcctacagttaaggaggctgtcct
ttcacaggataaaatagagttacaaagtggattatggacttcttccagat
gtcactgatgtttattatgagagcaggacccctttcctgtggaggggagg
taggcactgtcctttcagacaaagtgtgtacaaattcctgagctgcagat
tcgctagagtgaacgtatatacttatattcataatttaaataacaattat
gtcatatacatgttgttaaatttgaaaaaaatgttttattacatcacatc
aaataaaggttatttgtagctgtaataaagtaacttaagtaattgttttt
aataaaaggtctgatgtcatacatgttattctacaaaggatggtgggggt
ggggtgcatactctgagcttgcgctttgcttgctaaacctctaacaggta
cctggggatgatggtgcacacctataaccctaacacacaggaaagcagag
gcagggggatctcaagtttgaagacagtctgagtttacatctagagacat
ttttaaaaaagttcctagaaagtaattgacaggtttatcctaaattacat
ttcaatgtagaaaccttatcctctttagtaattaaaaaaattgaataaaa
agtgtttgttgatttgataaacacctgtctcttggtcctgttgggattgg
cactgctgggagggcaaagatgtgacaatattcttattttaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_36032834_36033773
seq2: B6Ng01-110G11.g_69_1010 (reverse)

seq1  TTAAAATAAGAACTATGTCACATCTTTGCCCTCCCAGCAGTGCCAATCCC  50
      ||||||||||||   |||||||||||||||||||||||||||||||||||
seq2  TTAAAATAAGAATATTGTCACATCTTTGCCCTCCCAGCAGTGCCAATCCC  50

seq1  AACAGGACCAAGAGACAGGTGTTTATCAAATCAACAAACACTTTTTTATT  100
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  AACAGGACCAAGAGACAGGTGTTTATCAAATCAACAAACAC-TTTTTATT  99

seq1  CAATTTTTTTTAATTACTAAAGA-GAT-AGGTTTCTACATTGAAATGTAA  148
      ||| ||||||||||||||||||| ||| ||||||||||||||||||||||
seq2  CAA-TTTTTTTAATTACTAAAGAGGATAAGGTTTCTACATTGAAATGTAA  148

seq1  TTTAGGATAAACCTGTCAATTACTTTCTAGGAACTTTTTTAAAAATGTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGGATAAACCTGTCAATTACTTTCTAGGAACTTTTTTAAAAATGTCT  198

seq1  CTAGATGTAAACTCAGACTGTCTTCAAACTTGAGATCCCCCTGCCTCTGC  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGATGTAAACTCAGACTGTCTTCAAACTTGAGATCCCCCTGCCTCTGC  248

seq1  -TTCCTGTGTGTTAGGGTTATAGGTGTGCACCATCATCCCCAGGTACCTG  297
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTGTGTGTTAGGGTTATAGGTGTGCACCATCATCCCCAGGTACCTG  298

seq1  TTAGAGGTTTAGCAAGC-AAGCGCAAGCTCAGAGTATGCACCCCACCCCC  346
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TTAGAGGTTTAGCAAGCAAAGCGCAAGCTCAGAGTATGCACCCCACCCCC  348

seq1  ACCATCCTTTGTAGAATAACATGTATGACATCAGACCTTTTATTAAAAAC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATCCTTTGTAGAATAACATGTATGACATCAGACCTTTTATTAAAAAC  398

seq1  AATTACTTAAGTTACTTTATTACAGCTACAAATAACCTTTATTTGATGTG  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTACTTAAGTTACTTTATTACAGCTACAAATAACCTTTATTTGATGTG  448

seq1  ATGTAATAAAACATTTTTTTCAAATTTAACAACATGTATATGACATAATT  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAATAAAACATTTTTTTCAAATTTAACAACATGTATATGACATAATT  498

seq1  GTTATTTAAATTATGAATATAAGTATATACGTTCACTCTAGCGAATCTGC  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTTAAATTATGAATATAAGTATATACGTTCACTCTAGCGAATCTGC  548

seq1  AGCTCAGGAATTTGTACACACTTTGTCTGAAAGGACAGTGCCTACCTCCC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAGGAATTTGTACACACTTTGTCTGAAAGGACAGTGCCTACCTCCC  598

seq1  CTCCACAGGAAAGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGG  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACAGGAAAGGGGTCCTGCTCTCATAATAAACATCAGTGACATCTGG  648

seq1  AAGAAGTCCATAATCCACTTTGTAACTCTATTTTATCCTGTGAAAGGACA  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGTCCATAATCCACTTTGTAACTCTATTTTATCCTGTGAAAGGACA  698

seq1  GCCTCCTTAACTGTAGGAAAATAATATTCTCTTTCAGTTCTCTTTTTATC  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCCTTAACTGTAGGAAAATAATATTCTCTTTCAGTTCTCTTTTTATC  748

seq1  AAATAAAGGTTTTCATTCATGTCCCCTTGTAGGCATGGGTACTCTTCTGA  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGGTTTTCATTCATGTCCCCTTGTAGGCATGGGTACTCTTCTGA  798

seq1  TCTGTGCCTTTCCCTCTCCTTCACCCAGACTACTACATAGTAACATTTAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGCCTTTCCCTCTCCTTCACCCAGACTACTACATAGTAACATTTAA  848

seq1  ATGATACTATCCACAAAAAAAACCTTTCTGTTTCCTTATCTGTCCTTAAC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATACTATCCACAAAAAAAACCTTTCTGTTTCCTTATCTGTCCTTAAC  898

seq1  TTTGACCATTTTTATTGGTGGGAGGGAGTTAAGGGACAGAATTC  940
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGACCATTTTTATTGGTGGGAGGGAGTTAAGGGACAGAATTC  942