BAC Information

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BAC

Clone NameB6Ng01-116G24
Chromosome19 (Build37)
Map Location 20,853,905 - 20,854,962
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7
Downstream geneTmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda, LOC100041633, 1110059E24Rik, 5730446C15Rik, Tmem2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116G24.bB6Ng01-116G24.g
ACCDH921436DH921437
length1,1051,051
definitionDH921436|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G24, 5' end.DH921437|Mus musculus domesticus DNA, BAC clone: B6Ng01-116G24, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttttagttctgcaccccattttaaatagggttatttggtt
ctggggagtctaacttcttgagttccttgtatatattggatgtaggattg
gtaaagatcttttaccaatgtgttggttgctgttttgtcctattgacaat
gtcctttgccttacaaaaagctttgcaattttatgaggtttgtcaattgt
tgatcttggaccataatccattggtgttctgttaaggaaattttcccctg
tacccatgtactggaggctctcccccactttctcttctattagtttcagt
gtatctggttttatatggagatccttggtccattttggacttgagctttg
tacaaggagataagaatggatcagtgttcattcttctacatgctgacctc
catatgaagcagcacaatttgttgaaaatgctgtcttttttccactggat
ggttttagcgcctttgtcaaagatcaagtgaccataggtgtgtgggttca
tttctggtcttcagttctatttcattgatcaacctccctgactctgtaca
aataccatgcagtttttatcactattgctctgcaatacaggttgagatta
gggatggtgattcccccagaagttcttttattgttgagggcagtttttgc
tatcctgggttttttggtattccaaatggatttgcaaattgctcattcta
attccatgaaagaattgagtgggaattttcatggggattgcattgaatct
gtaggttgctttcagtaagatggccagttttactatattaatcctgccaa
tccatgagcatgggagatctttccatcttctgagatcttctttgatttct
tttcttcagggacttgaagttcttgtcatacagatctttcacttgcttgg
ttagtgtcacaccaaggtattatatatggtttgtgactattctgaaaggt
ttcatttctctaatttcttcttggtcctttattctttgagtagaggaaag
ctacttgatttgtttgagttagtttatattccggcccctttgtctgaagt
gttttaccagattaaggatttctgggtgaaaactcttggggatcactaag
ataac
gaattcattatcatcgtccatttctgtgagaattttcctttgttaataca
aaacattctacaaaaactacacataatcaggatgagtggaaaagacaatt
agaaattattaattgcttcagataggagaaaacaaaaaggcccatgtgtc
atagagtatgactagctactttggaaaattaatcttcaatagtgaaggga
taactgtacgacttccattagtgttgggttgatggcgctccttccctacc
gacatcaatatggcatcacggtggcatgtttcgcttacagttttctagat
ggctcacagatctaaaacactctgacctcaagtttcccagagctagatat
ggtgcaaatgtagctgccatatttccatttggcctggattcactgctcag
tatctgactgctccctgtgggttggggtacgggatgagctacagtatttg
caagaaaagcacccacgggcagctgcaaagactttatgctatggatgctc
aatgctggaaacaatttgtttattactgctcctttctttgttcattagtc
ataagtgacttatttttattttattatatttttacttatttactgaattt
gcatttttgtatgtgtgaggacatgtgcctcctagtgcttacacatgaag
gtcagaggttactggacgttggtgctctctttccactgtatgggtccctg
ggatggagctcaggttgctatacgtagtagcagccacctttatcagctga
accattgctcctaagtcatgtattaagtcatgtattcatctatcaaatat
tttaccaacataggtatgcttatgttaaatacccaaggcaaggataacta
tgtttgcatatcttttcagaaattatttaatcatctctgtcttagttagg
gttttcattggtttgtgaaacaccatgaccaaaattgactggggcagaaa
gactttatttcacttctccttatacacacagttcatcgtcaaaggaagtc
aggcaggacctggagagacttgatgcaaggccaagaggggtgctgctact
a
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20853905_20854962
seq2: B6Ng01-116G24.g_68_1118 (reverse)

seq1  TAGTAAGCAGCACCCCTCCTTGGCCTTTGCATCAGGTCCTCCTTCCAGGT  50
      |||| |||||||||||| ||||||| |||||||| || |||  |||||| 
seq2  TAGT-AGCAGCACCCCT-CTTGGCC-TTGCATCAAGT-CTC--TCCAGG-  43

seq1  TCCTGCCTTGACTTCCTTTGACGATGAACTGTGTTGTATAAGGAGAAGTG  100
      ||||||| ||||||||||||||||||||||||| ||||||||||||||||
seq2  TCCTGCC-TGACTTCCTTTGACGATGAACTGTG-TGTATAAGGAGAAGTG  91

seq1  AAATAAAGTCTTTCCTGCCCAGGTCAATTTTGGTCATGGTGTTTCACAAA  150
      ||||||||||||| ||||||  ||||||||||||||||||||||||| ||
seq2  AAATAAAGTCTTT-CTGCCCCAGTCAATTTTGGTCATGGTGTTTCAC-AA  139

seq1  ACCAATG-AAACCCTAACTAAGACAGAGATG-TTAAATAATTTCTGAAAA  198
      ||||||| ||||||||||||||||||||||| ||||||||||||||||||
seq2  ACCAATGAAAACCCTAACTAAGACAGAGATGATTAAATAATTTCTGAAAA  189

seq1  GATATGC-AACATAAGTTATCCTTGCC-TGGGTATTTAACATAAGCATAC  246
      ||||||| ||||| ||||||||||||| ||||||||||||||||||||||
seq2  GATATGCAAACAT-AGTTATCCTTGCCTTGGGTATTTAACATAAGCATAC  238

seq1  CTATGTTGGT-AAATATTTGATAGATGAATACATGACTTAATACATGACT  295
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  CTATGTTGGTAAAATATTTGATAGATGAATACATGACTTAATACATGACT  288

seq1  TAGGAGCAATGGTTCAGCTGATAAAGGTGGCTGCTACTACGTATAGCAAC  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAGCAATGGTTCAGCTGATAAAGGTGGCTGCTACTACGTATAGCAAC  338

seq1  CTGAGCTCCATCCCAGGGACCCATACAGTGGAAAGAGAGCACCAACGTCC  395
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGCTCCATCCCAGGGACCCATACAGTGGAAAGAGAGCACCAACGTCC  388

seq1  AGTAACCTCTGACCTTCATGTGTAAGCACTAGGAGGCACATGTCCTCACA  445
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAACCTCTGACCTTCATGTGTAAGCACTAGGAGGCACATGTCCTCACA  438

seq1  CATACAAAAATGCAAATTCAGTAAATAAGTAAAAATATAATAAAATAAAA  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACAAAAATGCAAATTCAGTAAATAAGTAAAAATATAATAAAATAAAA  488

seq1  ATAAGTCACTTATGACTAATGAACAAAGAAAGGAGCAGTAATAAACAAAT  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTCACTTATGACTAATGAACAAAGAAAGGAGCAGTAATAAACAAAT  538

seq1  TGTTTCCAGCATTGAGCATCCATAGCATAAAGTCTTTGCAGCTGCCCGTG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCAGCATTGAGCATCCATAGCATAAAGTCTTTGCAGCTGCCCGTG  588

seq1  GGTGCTTTTCTTGCAAATACTGTAGCTCATCCCGTACCCCAACCCACAGG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGCTTTTCTTGCAAATACTGTAGCTCATCCCGTACCCCAACCCACAGG  638

seq1  GAGCAGTCAGATACTGAGCAGTGAATCCAGGCCAAATGGAAATATGGCAG  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGTCAGATACTGAGCAGTGAATCCAGGCCAAATGGAAATATGGCAG  688

seq1  CTACATTTGCACCATATCTAGCTCTGGGAAACTTGAGGTCAGAGTGTTTT  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACATTTGCACCATATCTAGCTCTGGGAAACTTGAGGTCAGAGTGTTTT  738

seq1  AGATCTGTGAGCCATCTAGAAAACTGTAAGCGAAACATGCCACCGTGATG  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTGTGAGCCATCTAGAAAACTGTAAGCGAAACATGCCACCGTGATG  788

seq1  CCATATTGATGTCGGTAGGGAAGGAGCGCCATCAACCCAACACTAATGGA  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATATTGATGTCGGTAGGGAAGGAGCGCCATCAACCCAACACTAATGGA  838

seq1  AGTCGTACAGTTATCCCTTCACTATTGAAGATTAATTTTCCAAAGTAGCT  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCGTACAGTTATCCCTTCACTATTGAAGATTAATTTTCCAAAGTAGCT  888

seq1  AGTCATACTCTATGACACATGGGCCTTTTTGTTTTCTCCTATCTGAAGCA  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCATACTCTATGACACATGGGCCTTTTTGTTTTCTCCTATCTGAAGCA  938

seq1  ATTAATAATTTCTAATTGTCTTTTCCACTCATCCTGATTATGTGTAGTTT  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATAATTTCTAATTGTCTTTTCCACTCATCCTGATTATGTGTAGTTT  988

seq1  TTGTAGAATGTTTTGTATTAACAAAGGAAAATTCTCACAGAAATGGACGA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAGAATGTTTTGTATTAACAAAGGAAAATTCTCACAGAAATGGACGA  1038

seq1  TGATAATGAATTC  1058
      |||||||||||||
seq2  TGATAATGAATTC  1051