BAC Information

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BAC

Clone NameB6Ng01-116O10
Chromosome19 (Build37)
Map Location 31,229,807 - 31,376,045
singlet/doubletdoublet
Overlap genePrkg1, 8430431K14Rik
Upstream geneGldc, EG625917, Mbl2, LOC100042088, LOC668020, EG546723, Dkk1, LOC625995, Cstf2t
Downstream gene1810073H04Rik, Asah2, EG668042, Sgms1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-116O10.bB6Ng01-116O10.g
ACCDH921782DH921783
length1,0521,056
definitionDH921782|Mus musculus domesticus DNA, BAC clone: B6Ng01-116O10, 5' end.DH921783|Mus musculus domesticus DNA, BAC clone: B6Ng01-116O10, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,374,997 - 31,376,045)(31,229,807 - 31,230,868)
sequence
gaattcaaatagtggaagtccggtacatctttaggcaggtgtgtgtgtgt
gtgtgtgtgtgtgtgtgtgtgattcaagtgttacattatcctatggataa
tttcaatgacaaattatgatgagcagcttttgttaaaaaatatgacaaac
tgacaaattgttatcatcaattagttttatttggatgatactgtgtagta
tgtatgtttccccccaagtacaatctacaattggcaatatgctatgaagg
aattggttgtaaaggattcaagaatgtatggccacatgaaaaatgttggc
cagatacagctgattatgatcgccagtcagtgacctttctcccaaagagc
cacgacaatattgtttgcactggggctctttcaatatgggttcttctggg
cacctaattctggatcttagaaaggagatccttcagtggataaatacagc
caggatttttctttctaagttggggaaatagcagctattgctccattaaa
ccaaacagattttaccattatgttttttgtaagaaatatatttttagggt
aaataaaggaccagaagaacacattttttgctaatatatgttttcttaga
attgtgaataagtttttgccattttaaaatttctgagcatttcagccttg
tataatactgctttattgaatctaattgagactgcaaatttctaaaggtt
aacatatggtgatcactccattcttaatcatatgaaatattgaaagaaat
attttagatagtctagtttattttaatggatttttggagctaattatttt
ttatgagatgattgctttccttcataaagatcagtgatgacatccaaggg
ccttgtaatttggtgccagctttcactagctgctacatactcatggtggc
aaatttagataggcactgtgcatctggatagtgagaacagctgaatgttg
gatgcaaaaaaatcaagcctggttccaggtcaaatattctacacccaggt
ggaatgcatgttgggggaccctctttttttctgatctgagcattacacat
gt
gaattcagaaagtcgaaagggaaaataaaatttttataagtttcaaggac
ttttatgtcttcagcggcccatcagctctcctccactaacttcacaatct
tgccgccacacatcctgtctatgttctcagggtctactgctggcctaaga
atttaaatgctatatgtctcctgataaaggcaagttgactgactgttctg
aaataagaagactcattttccactatcatttgaagttcagagattcactg
taggccctgggaagaggagtggtataaatagtcactgtggtattgaacaa
tgacaataatgattgaagggcctcgactttattaggtaattgctgtgttt
cagggatttttgctcttggtatattgctctatagatccagagactaagat
cagagaaatctaaacatttgaatagaaaattgggtacctttatcagacaa
atcaaatgctttactatggaaatatatgtttttttaaaataaaatatttt
gcataaaacctttcattcattttgatttagaatttaatagaacaaaaatg
tttatttctcatgtgtaaattacttattcttttaacagataaatgaaagg
taagacctaacttagtacatttaaaaatcttgacttctagaaagtttaga
tttaatattaatctttaaaaatcttttaattttattatgttctgtgtatg
ggtgttttgcctgagtgtgtctttgtagcacatgcatgcagtgcccaccg
agaccagaagagaacatcagatcccctgcagctgaaattataaacagttg
tgaggggccatgtgggtgctaggaattgaacccaggtcctctggaagagc
aaccagtgctattaatcactgagctgcctctccagctcctaaagttacca
ttttaacttttaaatgatattctcaatactaacttttaaatgatattctt
ctgtttcagtagatcttcccaccctccaccattatattttctatatacca
gtagtatatcaaccgttttcttgttttacggatgtggcatttattttaag
gaacaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_31374997_31376045
seq2: B6Ng01-116O10.b_50_1101 (reverse)

seq1  ACATGTGTAATGCTCAGATCAAGAAAAAAAGAAGGTTCCCCAACATGCA-  49
      |||||||||||||||||||| ||||||||||| ||| |||||||||||| 
seq2  ACATGTGTAATGCTCAGATC-AGAAAAAAAGAGGGTCCCCCAACATGCAT  49

seq1  TCCACCTTGGTGTAGAATATTTTGACCTGGAAACAGGCTTGATTTTTTTG  99
      ||||||| ||||||||||| |||||||||||| |||||||||||||||||
seq2  TCCACCTGGGTGTAGAATA-TTTGACCTGGAACCAGGCTTGATTTTTTTG  98

seq1  CATCCAACATTCAGCTTGTTCTCACTAATCCAGATGCACAGTGCCTATCT  149
      ||||||||||||||| |||||||||| |||||||||||||||||||||||
seq2  CATCCAACATTCAGC-TGTTCTCACT-ATCCAGATGCACAGTGCCTATCT  146

seq1  AAATTTGCCACCATGAGTATGTAGCAGCTAGTGAAAGCTGGCACCAATTT  199
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  AAATTTGCCACCATGAGTATGTAGCAGCTAGTGAAAGCTGGCACCAAATT  196

seq1  AC-AGGCCC-TGGATGTCATCACTGATCTTTATGAAGGAAAGCAATCATC  247
      || |||||| ||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCCTTGGATGTCATCACTGATCTTTATGAAGGAAAGCAATCATC  246

seq1  TCAT-AAAAATAATTAGCTCC-AAAATCCATTTAAATAAACTAGACTATC  295
      |||| |||||||||||||||| |||||||||| |||||||||||||||||
seq2  TCATAAAAAATAATTAGCTCCAAAAATCCATTAAAATAAACTAGACTATC  296

seq1  TAAAATATTTCTTTCAATATTTCATATGATTAAGAATGGAGTGATCACCA  345
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATTTCTTTCAATATTTCATATGATTAAGAATGGAGTGATCACCA  346

seq1  TATGTTAACCTTTAGAAATTTGCAGTCTCAATTAGATTCAAT-AAGCAGT  394
      |||||||||||||||||||||||||||||||||||||||||| |||||||
seq2  TATGTTAACCTTTAGAAATTTGCAGTCTCAATTAGATTCAATAAAGCAGT  396

seq1  ATTATACAAGGCTGAAATGCTCAGAAATTTTAAAATGGC-AAAACTTATT  443
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  ATTATACAAGGCTGAAATGCTCAGAAATTTTAAAATGGCAAAAACTTATT  446

seq1  CACAATTCTAAGAAAACATATATTAGCAAAAAATGTGTTCTTCTGGTCCT  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATTCTAAGAAAACATATATTAGCAAAAAATGTGTTCTTCTGGTCCT  496

seq1  TTATTTACCCTAAAAATATATTTCTTACAAAAAACATAATGGTAAAATCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTACCCTAAAAATATATTTCTTACAAAAAACATAATGGTAAAATCT  546

seq1  GTTTGGTTTAATGGAGCAATAGCTGCTATTTCCCCAACTTAGAAAGAAAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTTAATGGAGCAATAGCTGCTATTTCCCCAACTTAGAAAGAAAA  596

seq1  ATCCTGGCTGTATTTATCCACTGAAGGATCTCCTTTCTAAGATCCAGAAT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGCTGTATTTATCCACTGAAGGATCTCCTTTCTAAGATCCAGAAT  646

seq1  TAGGTGCCCAGAAGAACCCATATTGAAAGAGCCCCAGTGCAAACAATATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTGCCCAGAAGAACCCATATTGAAAGAGCCCCAGTGCAAACAATATT  696

seq1  GTCGTGGCTCTTTGGGAGAAAGGTCACTGACTGGCGATCATAATCAGCTG  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCGTGGCTCTTTGGGAGAAAGGTCACTGACTGGCGATCATAATCAGCTG  746

seq1  TATCTGGCCAACATTTTTCATGTGGCCATACATTCTTGAATCCTTTACAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTGGCCAACATTTTTCATGTGGCCATACATTCTTGAATCCTTTACAA  796

seq1  CCAATTCCTTCATAGCATATTGCCAATTGTAGATTGTACTTGGGGGGAAA  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTCCTTCATAGCATATTGCCAATTGTAGATTGTACTTGGGGGGAAA  846

seq1  CATACATACTACACAGTATCATCCAAATAAAACTAATTGATGATAACAAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATACTACACAGTATCATCCAAATAAAACTAATTGATGATAACAAT  896

seq1  TTGTCAGTTTGTCATATTTTTTAACAAAAGCTGCTCATCATAATTTGTCA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCAGTTTGTCATATTTTTTAACAAAAGCTGCTCATCATAATTTGTCA  946

seq1  TTGAAATTATCCATAGGATAATGTAACACTTGAATCACACACACACACAC  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAATTATCCATAGGATAATGTAACACTTGAATCACACACACACACAC  996

seq1  ACACACACACACACACACCTGCCTAAAGATGTACCGGACTTCCACTATTT  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACCTGCCTAAAGATGTACCGGACTTCCACTATTT  1046

seq1  GAATTC  1049
      ||||||
seq2  GAATTC  1052

seq1: chr19_31229807_31230868
seq2: B6Ng01-116O10.g_68_1123

seq1  GAATTCAGAAAGTCGAAAGGGAAAATAAAATTTTTATAAGTTTCAAGGAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGAAAGTCGAAAGGGAAAATAAAATTTTTATAAGTTTCAAGGAC  50

seq1  TTTTATGTCTTCAGCGGCCCATCAGCTCTCCTCCACTAACTTCACAATCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTCTTCAGCGGCCCATCAGCTCTCCTCCACTAACTTCACAATCT  100

seq1  TGCCGCCACACATCCTGTCTATGTTCTCAGGGTCTACTGCTGGCCTAAGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCGCCACACATCCTGTCTATGTTCTCAGGGTCTACTGCTGGCCTAAGA  150

seq1  ATTTAAATGCTATATGTCTCCTGATAAAGGCAAGTTGACTGACTGTTCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAAATGCTATATGTCTCCTGATAAAGGCAAGTTGACTGACTGTTCTG  200

seq1  AAATAAGAAGACTCATTTTCCACTATCATTTGAAGTTCAGAGATTCACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAGAAGACTCATTTTCCACTATCATTTGAAGTTCAGAGATTCACTG  250

seq1  TAGGCCCTGGGAAGAGGAGTGGTATAAATAGTCACTGTGGTATTGAACAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCCCTGGGAAGAGGAGTGGTATAAATAGTCACTGTGGTATTGAACAA  300

seq1  TGACAATAATGATTGAAGGGCCTCGACTTTATTAGGTAATTGCTGTGTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAATAATGATTGAAGGGCCTCGACTTTATTAGGTAATTGCTGTGTTT  350

seq1  CAGGGATTTTTGCTCTTGGTATATTGCTCTATAGATCCAGAGACTAAGAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGGATTTTTGCTCTTGGTATATTGCTCTATAGATCCAGAGACTAAGAT  400

seq1  CAGAGAAATCTAAACATTTGAATAGAAAATTGGGTACCTTTATCAGACAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAAATCTAAACATTTGAATAGAAAATTGGGTACCTTTATCAGACAA  450

seq1  ATCAAATGCTTTACTATGGAAATATATGTTTTTTTAAAATAAAATATTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAATGCTTTACTATGGAAATATATGTTTTTTTAAAATAAAATATTTT  500

seq1  GCATAAAACCTTTCATTCATTTTGATTTAGAATTTAATAGAACAAAAATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAAAACCTTTCATTCATTTTGATTTAGAATTTAATAGAACAAAAATG  550

seq1  TTTATTTCTCATGTGTAAATTACTTATTCTTTTAACAGATAAATGAAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTCATGTGTAAATTACTTATTCTTTTAACAGATAAATGAAAGG  600

seq1  TAAGACCTAACTTAGTACATTTAAAAATCTTGACTTCTAGAAAGTTTAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGACCTAACTTAGTACATTTAAAAATCTTGACTTCTAGAAAGTTTAGA  650

seq1  TTTAATATTAATCTTTAAAAATCTTTTAATTTTATTATGTTCTGTGTATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATATTAATCTTTAAAAATCTTTTAATTTTATTATGTTCTGTGTATG  700

seq1  GGTGTTTTGCCTGAGTGTGTCTTTGTAGCACATGCATGCAGTGCCCACCG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTTTGCCTGAGTGTGTCTTTGTAGCACATGCATGCAGTGCCCACCG  750

seq1  AGACCAGAAGAGAACATCAGATCCCCTGCAGCTGAAATTATAAACAGTTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACCAGAAGAGAACATCAGATCCCCTGCAGCTGAAATTATAAACAGTTG  800

seq1  TGAGGGGCCATGTGGGTGCTAGGAATTGAACCCAGGTCCTCTGGAAGAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGGGCCATGTGGGTGCTAGGAATTGAACCCAGGTCCTCTGGAAGAGC  850

seq1  AACCAGTGCTATTAATCACTGAGCTGCCTCTCCAGCTCCTAAAGTTAACC  900
      ||||||||||||||||||||||||||||||||||||||||||||||| | 
seq2  AACCAGTGCTATTAATCACTGAGCTGCCTCTCCAGCTCCTAAAGTTACCA  900

seq1  ATTTAACTTTTAAATGATATTCTCAATACTAACTTTTAAATGATATTC-T  949
       ||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  TTTTAACTTTTAAATGATATTCTCAATACTAACTTTTAAATGATATTCTT  950

seq1  CTGTTTCAGTAAGATCTTCCCACCCTCCACCA-TATATTTTCTATATAAC  998
      |||||||||| ||||||||||||||||||||| |||||||||||||| ||
seq2  CTGTTTCAGT-AGATCTTCCCACCCTCCACCATTATATTTTCTATAT-AC  998

seq1  CAGTAGTATATCCAACCGTTCTTTCTTTGTTCTACAGTATGTGGCAATTA  1048
      ||||||||||| |||||||  |||| ||||| ||| | |||||||| |||
seq2  CAGTAGTATAT-CAACCGT--TTTC-TTGTTTTAC-GGATGTGGCATTTA  1043

seq1  TTTTAAAGGAACAA  1062
      |||| |||||||||
seq2  TTTT-AAGGAACAA  1056