BAC Information

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BAC

Clone NameB6Ng01-125C24
Chromosome19 (Build37)
Map Location 12,264,477 - 12,265,668
singlet/doubletsinglet
Overlap genenone
Upstream geneMs4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1
Downstream geneOlfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-125C24.bB6Ng01-125C24.g
ACCDH927893DH927894
length1,1761,176
definitionDH927893|Mus musculus domesticus DNA, BAC clone: B6Ng01-125C24, 5' end.DH927894|Mus musculus domesticus DNA, BAC clone: B6Ng01-125C24, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaacaaaaaaagcttcaaagggactaccagaccagttccatgtg
tcagtgttgagcatctaccatgcctgggttatctacatcatcttccagga
gttaccaaggtttatgtcctagactctggggctagaacaacagggctgtt
tgcagtattccaacagggctaatggacttgtgtatgagcactctgccatc
ttatcatggatcaattttgtctcttgttttcagtagtcatgaaccaaggt
tctttatttaagtggaaatgaaattactatgatttccaaagcaaaattcc
caagggaaaacattaaaagtgtcctttgggtaggggaaattgggaaacag
agacaagtatgttttgatcttttgatattcccttgaaatttcagcaaata
actgtttttatttagctatcaattatttacttttacattgagtcatattt
catatataccactttattcaaatctgtaagtcctatttttgaaatgttat
gtgtgaaaaacgaagagagtaacaaatttcaagatcatatcctcaagaca
ttacataattagagttcaacagtatcacctacctcatcgtaatacctgga
ttttcctggatttttctgaatattctttttacagttcagagaatttgagt
caagagtaaaagaacccaaggaattgtcctaaggagaaggtgaggaactg
aggaagaggaaagaaagcataacagggtgttcctcagtaactgcccatgg
tattactggcagcattgcccagtcactgagatttaactagccacagttaa
tgtcgaaggttgaaatgacccatttctttatcaaggtcgctttctagagt
tcctattgcattcttaggtcattaacaaactactgttaatgtgtagcagt
ggagatggtcaacactgggatcctctttcaaagtgtcatggagagtagaa
ggtgaaagagaaaagccagtttacaggagagctcactcacgttatttgcc
ctctggtccctaatgtcatagagtagctgtctctgcaagtttgaaagctg
cgttacgatgacctctgactcatgctccgttcatctacagagatctagat
tatagcccatctgactgcttaagtcattgagttgtgaaagaacacatgca
cagtctagtccaaattccttgtttct
gaattccattgtgtaaatgaaataaattttctgtatccattctttcattg
tggaaaatctaggttgtttccagcttctggttcttaaaaataaagtgact
atgaacatcatgcagcacatgtcgctctggtatggtggggcagcttttgg
gtatatgcccaggagtgatgtagcgggggtcttcagataggtctatttcc
aattttctgaggaaccaccagactgatttccagagtggttgcaccagttt
acactcccaccagcaatggaggagtgttcttttttctccacatccttgcc
aatatgtgctgtcaactgagtttttgatcttagccattacgattggcata
agatggaatctcagggtcattttgatttgcattgccctgatgaataagaa
ctttgaacatttctttttttttttttttaagtgcttcttaccattcaagt
ttcctctgctgtgaattctctgtttagctgtgtaccccattttttgattg
tgttgtttggttttttggaggttagcttttttgaattctttcatatattt
ttgggtactagccctctattggatgaaggatgagtgaagtttgttttttt
ttttccccaatctgtagattgtcagttttttcctattcatggtatctttt
tgccttacagtttttttttttttataaggtcccatttatcaatttgttga
tcttagagcctgagccattggagtttctgtttaggaaatttccccctatg
ccactttccttttccattaaattcagtatatcccagtttacattgaagtc
tttgatccacttggaattgacttttgggcaaggtgaaaaaaaagggatct
attttcatttctctactacagaactgccagtattaacgaggaaataaaat
caccagagagtggaacccctcacacccctgaacccttccccttctagtgt
tagagatcaaatagatgaggagggcctacaaaatagcagagtaccaaaag
taggagacaaaaatctgccatcctatgaacagggcttcaaggggatgggg
aagagtcaggacacctagatccagaagtatggcggtgtgatatggctcct
agaacctatgggaaatgggaagacacaggagtagaaacaatcaccacaaa
ccgtgcataaatcccggcgccgtagt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12264477_12265668
seq2: B6Ng01-125C24.b_44_1219

seq1  GAATTCAAACAAAAAAAGCTTCAAAGGGACTACCAGACCAGTTCCATGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAACAAAAAAAGCTTCAAAGGGACTACCAGACCAGTTCCATGTG  50

seq1  TCAGTGTTGAGCATCTACCATGCCTGGGTTATCTACATCATCTTCCAGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTGTTGAGCATCTACCATGCCTGGGTTATCTACATCATCTTCCAGGA  100

seq1  GTTACCAAGGTTTATGTCCTAGACTCTGGGGCTAGAACAACAGGGCTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCAAGGTTTATGTCCTAGACTCTGGGGCTAGAACAACAGGGCTGTT  150

seq1  TGCAGTATTCCAACAGGGCTAATGGACTTGTGTATGAGCACTCTGCCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTATTCCAACAGGGCTAATGGACTTGTGTATGAGCACTCTGCCATC  200

seq1  TTATCATGGATCAATTTTGTCTCTTGTTTTCAGTAGTCATGAACCAAGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCATGGATCAATTTTGTCTCTTGTTTTCAGTAGTCATGAACCAAGGT  250

seq1  TCTTTATTTAAGTGGAAATGAAATTACTATGATTTCCAAAGCAAAATTCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATTTAAGTGGAAATGAAATTACTATGATTTCCAAAGCAAAATTCC  300

seq1  CAAGGGAAAACATTAAAAGTGTCCTTTGGGTAGGGGAAATTGGGAAACAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGGAAAACATTAAAAGTGTCCTTTGGGTAGGGGAAATTGGGAAACAG  350

seq1  AGACAAGTATGTTTTGATCTTTTGATATTCCCTTGAAATTTCAGCAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAAGTATGTTTTGATCTTTTGATATTCCCTTGAAATTTCAGCAAATA  400

seq1  ACTGTTTTTATTTAGCTATCAATTATTTACTTTTACATTGAGTCATATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTTTTTATTTAGCTATCAATTATTTACTTTTACATTGAGTCATATTT  450

seq1  CATATATACCACTTTATTCAAATCTGTAAGTCCTATTTTTGAAATGTTAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATACCACTTTATTCAAATCTGTAAGTCCTATTTTTGAAATGTTAT  500

seq1  GTGTGAAAAACGAAGAGAGTAACAAATTTCAAGATCATATCCTCAAGACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGAAAAACGAAGAGAGTAACAAATTTCAAGATCATATCCTCAAGACA  550

seq1  TTACATAATTAGAGTTCAACAGTATCACCTACCTCATCGTAATACCTGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATAATTAGAGTTCAACAGTATCACCTACCTCATCGTAATACCTGGA  600

seq1  TTTTCCTGGATTTTTCTGAATATTCTTTTTACAGTTCAGAGAATTTGAGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCCTGGATTTTTCTGAATATTCTTTTTACAGTTCAGAGAATTTGAGT  650

seq1  CAAGAGTAAAAGAACCCAAGGAATTGTCCTAAGGAGAAGGTGAGGAACTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAGTAAAAGAACCCAAGGAATTGTCCTAAGGAGAAGGTGAGGAACTG  700

seq1  AGGAAGAGGAAAGAAAGCATAACAGGGTGTTCCTCAGTAACTGCCCATGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAGGAAAGAAAGCATAACAGGGTGTTCCTCAGTAACTGCCCATGG  750

seq1  TATTACTGGCAGCATTGCCCAGTCACTGAGATTTAACTAGCCACAGTTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGGCAGCATTGCCCAGTCACTGAGATTTAACTAGCCACAGTTAA  800

seq1  TGTCGAAGGTTGAAATGACCCATTTCTTTATCAAGGTCGCTTTCTAGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCGAAGGTTGAAATGACCCATTTCTTTATCAAGGTCGCTTTCTAGAGT  850

seq1  TCCTATTGCATTCTTAGGTCATTAACAAAACTACTGTTAATGTGTAGCAG  900
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TCCTATTGCATTCTTAGGTCATTAAC-AAACTACTGTTAATGTGTAGCAG  899

seq1  TGGAGATGGTCACCACTGGGATCCTC-TTCAAAGTGTCATGGAGAGTAG-  948
      |||||||||||| ||||||||||||| |||||||||||||||||||||| 
seq2  TGGAGATGGTCAACACTGGGATCCTCTTTCAAAGTGTCATGGAGAGTAGA  949

seq1  AGGTGAAAGAGAAAAGCCAG-TTACAGGGAGAGCTCACTCACGTTATTTG  997
      |||||||||||||||||||| ||||| |||||||||||||||||||||||
seq2  AGGTGAAAGAGAAAAGCCAGTTTACA-GGAGAGCTCACTCACGTTATTTG  998

seq1  CCCTCTGGTCCCTAATTGTCATAGAGTAGCTGTCTCTGCAAGTTTGAAGG  1047
      ||||||||||||||| |||||||||||||||||||||||||||||||| |
seq2  CCCTCTGGTCCCTAA-TGTCATAGAGTAGCTGTCTCTGCAAGTTTGAAAG  1047

seq1  CCTGCGTTACGATGGCCCTCTGACCCCATGCTCCCTTTCCATTCTCACAG  1097
       |||||||||||| | ||||||| | |||||||| ||  || ||| ||| 
seq2  -CTGCGTTACGAT-GACCTCTGA-CTCATGCTCCGTT--CA-TCT-ACA-  1089

seq1  GAGAATCTCAGAATTATAGCCCATCTGACTGCCTTTAGAGTCATTTGAGT  1147
      ||| |||| || ||||||||||||||||||||  ||| ||||| ||||||
seq2  GAG-ATCT-AG-ATTATAGCCCATCTGACTGC--TTA-AGTCA-TTGAGT  1132

seq1  TGT-AGAGGACACATGCACAGGTCTAGTTCCAAAATCTCTGTTTCT  1192
      ||| | || ||||||||||| |||||| |||||| ||  |||||||
seq2  TGTGAAAGAACACATGCACA-GTCTAG-TCCAAATTCCTTGTTTCT  1176