BAC Information

Click to search

BAC

Clone NameB6Ng01-126F10
Chromosome19 (Build37)
Map Location 36,488,150 - 36,489,318
singlet/doubletsinglet
Overlap genePcgf5
Upstream geneLOC100042292, A830019P07Rik, Htr7, Rpp30, Ankrd1, LOC668195, LOC668201
Downstream geneHectd2, LOC668215, Ppp1r3c, Tnks2, Fgfbp3, Btaf1, Cpeb3, March5, LOC668230, Ide, LOC100043010, Kif11, EG667490, LOC631069
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126F10.bB6Ng01-126F10.g
ACCDH928733DH928734
length1,16791
definitionDH928733|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F10, 5' end.DH928734|Mus musculus domesticus DNA, BAC clone: B6Ng01-126F10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcagctcctcctgcaccatgcctgcctggatgctgccatgctcc
caccttgaggacaatggactgaacctctgaacctgtaagccagccccaat
taaatgctgtccattataagagttgtctgggagctagagagatggctcaa
caggtaagagcactgactgctcttccagaggtcctgagttcaaattccag
caaccacatggtggctcacaaccatctgtaatgagatctgaggccctttt
ctatagctaaggtatactcatatataataaataaataaaaatcttaaaaa
aaaaaaaaaagagttgcctggtcttggtgtccgttcacaatagtaaaacc
ctaactaagaacagtgctttcttcaatgttaaaaatcaatgatagaagta
gctaaataaaatttcttggaaatctcaggaattttatggaatttcaggaa
aaagaacataaaaataatttttacttgtaataaatacttctaggatcttt
tggttttcttcaaaataagagataatgatttgggattttatttcaaaata
tctttcaggatataaaacttgtagtagagagaaattgtgagatttatgct
ttcatcttatctcataattggccatttctgctagagatccaaatagaaaa
atgcagaaatattagtatcagtgaaacaaagcagactgtggaccatacat
aggcatgtgcaggtacaactggagtcaagagacaacgtttgattgattgt
ccactccagcgtgcacttcttaatggcttttcccctccccgaaacatcca
cagtaggatcactctttccctgcctccatcccaaatcacactacctttga
agcctaagtcttacaggtggcatatgtgtgcacgcacttgtgccttctac
tgatacgatgctcttaaacctgccacgcatagtccaggtcaaactctctg
atcttactcgctattctctcttctagaggttctcccttgtagcgctcacc
acttaagcgttctgtattaacagcacagagagctgacatgacatctaata
agtaaccttgcccctgcctacatcgggttctttttcatgcctctccgcac
cattaatattggatcttatttacggtttcccttctagaatgtatctggta
tttagcactggcacttg
aaggccagacgtgatacatgctaagacctgtttcagaaagagagagggag
ggaggaaggaaggtaaaaagaaagggaaaggggaggggaga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_36488150_36489318
seq2: B6Ng01-126F10.b_50_1216 (reverse)

seq1  CAAGTG-CAGTGCTAAATA-CAGATACATTCTAGGAAGGGAAA-CGTAAA  47
      |||||| |||||||||||| ||||||||||||| ||||||||| ||||||
seq2  CAAGTGCCAGTGCTAAATACCAGATACATTCTA-GAAGGGAAACCGTAAA  49

seq1  T-AGATTCAATATTTATTGGTGACGAAGA-GCATGAAAAGGAGCCGATTG  95
      | |||| ||||| ||| ||||| || ||| ||||||||| || ||   ||
seq2  TAAGATCCAATA-TTAATGGTG-CGGAGAGGCATGAAAAAGAACCCGATG  97

seq1  TAGGCAGGGGCAGGGTTACTTTATATGATGTCATGTCAGCTTCTCTGTGC  145
      |||||||||||| |||||| ||||  |||||||||||||| |||||||||
seq2  TAGGCAGGGGCAAGGTTAC-TTATTAGATGTCATGTCAGC-TCTCTGTGC  145

seq1  TGTTTATACAGAACGCTTAAGTGGTTGAGCGCTAC-AGGGAGAACCTTCT  194
      |||| ||||||||||||||||||| |||||||||| |||||||||| |||
seq2  TGTTAATACAGAACGCTTAAGTGG-TGAGCGCTACAAGGGAGAACC-TCT  193

seq1  AGAAGAGAGATTAGCGAGTAAGATCAGAGAGTTTGACCTGGACTATGCGT  244
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAGAGAATAGCGAGTAAGATCAGAGAGTTTGACCTGGACTATGCGT  243

seq1  GGCAGGATCTAAGAGCATCGTATCAGTTAGAAGGCACAAGTGCGTGCACA  294
      |||||| | ||||||||||||||||| |||||||||||||||||||||||
seq2  GGCAGG-TTTAAGAGCATCGTATCAG-TAGAAGGCACAAGTGCGTGCACA  291

seq1  CATATGCCACCTGTAAGACTTAGGCTTCAAAGGTAGTGTGATTTGGGATG  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATGCCACCTGTAAGACTTAGGCTTCAAAGGTAGTGTGATTTGGGATG  341

seq1  GAGGCAGGG-AAGAGTGATCCTACTGTGGATGTTTCGGGGAGGGGAAAAG  393
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GAGGCAGGGAAAGAGTGATCCTACTGTGGATGTTTCGGGGAGGGGAAAAG  391

seq1  CCATTAAGAAGTGCACGCTGGAGTGGACAATCAATCAAACGTTGTCTCTT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTAAGAAGTGCACGCTGGAGTGGACAATCAATCAAACGTTGTCTCTT  441

seq1  GACTCCAGTTGTACCTGCACATGCCTATGTATGGTCCACAGTCTGCTTTG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCAGTTGTACCTGCACATGCCTATGTATGGTCCACAGTCTGCTTTG  491

seq1  TTTCACTGATACTAATATTTCTGCATTTTTCTATTTGGATCTCTAGCAGA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCACTGATACTAATATTTCTGCATTTTTCTATTTGGATCTCTAGCAGA  541

seq1  AATGGCCAATTATGAGATAAGATGAAAGCATAAATCTCACAATTTCTCTC  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCAATTATGAGATAAGATGAAAGCATAAATCTCACAATTTCTCTC  591

seq1  TACTACAAGTTTTATATCCTGAAAGATATTTTGAAATAAAATCCCAAATC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACAAGTTTTATATCCTGAAAGATATTTTGAAATAAAATCCCAAATC  641

seq1  ATTATCTCTTATTTTGAAGAAAACCAAAAGATCCTAGAAGTATTTATTAC  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATCTCTTATTTTGAAGAAAACCAAAAGATCCTAGAAGTATTTATTAC  691

seq1  AAGTAAAAATTATTTTTATGTTCTTTTTCCTGAAATTCCATAAAATTCCT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTAAAAATTATTTTTATGTTCTTTTTCCTGAAATTCCATAAAATTCCT  741

seq1  GAGATTTCCAAGAAATTTTATTTAGCTACTTCTATCATTGATTTTTAACA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTTCCAAGAAATTTTATTTAGCTACTTCTATCATTGATTTTTAACA  791

seq1  TTGAAGAAAGCACTGTTCTTAGTTAGGGTTTTACTATTGTGAACGGACAC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGAAAGCACTGTTCTTAGTTAGGGTTTTACTATTGTGAACGGACAC  841

seq1  CAAGACCAGGCAACTCTTTTTTTTTTTTTTTAAGATTTTTATTTATTTAT  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGACCAGGCAACTCTTTTTTTTTTTTTTTAAGATTTTTATTTATTTAT  891

seq1  TATATATGAGTATACCTTAGCTATAGAAAAGGGCCTCAGATCTCATTACA  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATGAGTATACCTTAGCTATAGAAAAGGGCCTCAGATCTCATTACA  941

seq1  GATGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCAGGACCTCT  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCAGGACCTCT  991

seq1  GGAAGAGCAGTCAGTGCTCTTACCTGTTGAGCCATCTCTCTAGCTCCCAG  1043
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGAGCAGTCAGTGCTCTTACCTGTTGAGCCATCTCTCTAGCTCCCAG  1041

seq1  ACAACTCTTATAATGGACAGCATTTAATTGGGGCTGGCTTACAGGTTCAG  1093
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACTCTTATAATGGACAGCATTTAATTGGGGCTGGCTTACAGGTTCAG  1091

seq1  AGGTTCAGTCCATTGTCCTCAAGGTGGGAGCATGGCAGCATCCAGGCAGG  1143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTCAGTCCATTGTCCTCAAGGTGGGAGCATGGCAGCATCCAGGCAGG  1141

seq1  CATGGTGCAGGAGGAGCTGAGAATTC  1169
      ||||||||||||||||||||||||||
seq2  CATGGTGCAGGAGGAGCTGAGAATTC  1167