BAC Information

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BAC

Clone NameB6Ng01-128C21
Chromosome19 (Build37)
Map Location 20,431,949 - 20,432,636
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042218, LOC100041541
Downstream geneAnxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128C21.bB6Ng01-128C21.g
ACCDH930101DH930102
length6881,142
definitionDH930101|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C21, 5' end.DH930102|Mus musculus domesticus DNA, BAC clone: B6Ng01-128C21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgggaaggagatgtgcattatctcattagagattaattatactt
ccaattgttttagtaatctttaaagggaacctatcttcctagggatggcc
cttcctttctgagcaagtagttccttaaccaggtcattgacattcccaac
agaaattttgagtctctacctaggtcagggatttcactgtctgttgttgt
tgttgtcgtcattgttgttgttgttgttgttgttgttttacatttcaaat
ggtatccactttcctagtttcccctccacaaaccccctatattctccgtc
ctcccctctgcctctatgagggtcttctcccactggcccaccaactcctg
cctcagcggtctagcgttccctctatcctgagtcatcaagcctccacagg
accaatgggtttccctcccattgatgccagataagcaatcctctgctaca
tacccacctgtgtattctttggttggaggtttagtccctggggagtctgg
ttcattgatattgttgttcttcctatgaggttgcaaaccccttcaactct
tacagtccttaccctaacttccccattgagatccccacactcagtccaat
gtttggttgtgtatatccacagctgcattggtccagatctggtagagtct
ctcagggaatagctatactaggctcctgtcagtaagca
gaattccttctttatgtcctctaccatcatcatgagatatgcttttaaat
ccaggtctaccttttcaggtgtgttagggtgtcctggattgggcgaagtg
ggcgttctgggttctgatgatggtgagtggtcctggcttctgttagtagg
attcttacgtttacctttcgccatctggcaatctctggagttagttgtta
tagttttctttgttaagagattgttcctctgttgattttgttaccctcta
tcagcaggcgtgggagacaagctctcttctctgagtttcagtggtcagag
cagtctctgtaggcaagctctcctctttcagggaaggtgtacagttatct
ggtgtttggacctcctcctggctgaaggtgaaggcccaaaacaggatctt
tcccagaagctgtgttgctttggccaggaaggtggccagttgtctggagt
cgaagatgtcgccgcctgagaagctctgtggctcttgtccggaaggaggc
cggccgtctggagctgaggatggcgctgcctcagaagctctgtggctctt
gccgggaaggtggctggttgtctggagctgaagatggcgccgcccagaag
ctctgcgactctcgcccgtcccagaaacggctggcactctgtattccaca
cggtcacccgtgcagcctgccctccgcggagtcccggagccaagaaggct
cccgccggcgcctgtgccacaaacctctcaggccgggcagacccccgtgc
tctcaccaggaaggtggccggctgtctgatattgaaatcttttaactctc
actgatatttaactcaagcatcaagttccaataaattttatactatgtcc
aatatgttgacttcattaaaaaccaggatttgatataatttagaattttc
ctattccagagtttgtttcccaacatgtttttaaagatgttgtgcttata
ggatatgtcaaaactaatgattttccagcttcttgtcattggagattcaa
ggagcaaaaagaacctgcctgttcagatatgagtgaaattttcttgctcc
agaatgatccaccctgggcaaaaagttccaggctgccttaccaagtatca
taagggaagggagacccttctcctccattctacacttaatct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20431949_20432636
seq2: B6Ng01-128C21.b_42_729

seq1  GAATTCTGGGAAGGAGATGTGCATTATCTCATTAGAGATTAATTATACTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGGGAAGGAGATGTGCATTATCTCATTAGAGATTAATTATACTT  50

seq1  CCAATTGTTTTAGTAATCTTTAAAGGGAACCTATCTTCCTAGGGATGGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATTGTTTTAGTAATCTTTAAAGGGAACCTATCTTCCTAGGGATGGCC  100

seq1  CTTCCTTTCTGAGCAAGTAGTTCCTTAACCAGGTCATTGACATTCCCAAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTTCTGAGCAAGTAGTTCCTTAACCAGGTCATTGACATTCCCAAC  150

seq1  AGAAATTTTGAGTCTCTACCTAGGTCAGGGATTTCACTGTCTGTTGTTGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATTTTGAGTCTCTACCTAGGTCAGGGATTTCACTGTCTGTTGTTGT  200

seq1  TGTTGTCGTCATTGTTGTTGTTGTTGTTGTTGTTGTTTTACATTTCAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGTCGTCATTGTTGTTGTTGTTGTTGTTGTTGTTTTACATTTCAAAT  250

seq1  GGTATCCACTTTCCTAGTTTCCCCTCCACAAACCCCCTATATTCTCCGTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCCACTTTCCTAGTTTCCCCTCCACAAACCCCCTATATTCTCCGTC  300

seq1  CTCCCCTCTGCCTCTATGAGGGTCTTCTCCCACTGGCCCACCAACTCCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCCTCTGCCTCTATGAGGGTCTTCTCCCACTGGCCCACCAACTCCTG  350

seq1  CCTCAGCGGTCTAGCGTTCCCTCTATCCTGAGTCATCAAGCCTCCACAGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGCGGTCTAGCGTTCCCTCTATCCTGAGTCATCAAGCCTCCACAGG  400

seq1  ACCAATGGGTTTCCCTCCCATTGATGCCAGATAAGCAATCCTCTGCTACA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATGGGTTTCCCTCCCATTGATGCCAGATAAGCAATCCTCTGCTACA  450

seq1  TACCCACCTGTGTATTCTTTGGTTGGAGGTTTAGTCCCTGGGGAGTCTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCCACCTGTGTATTCTTTGGTTGGAGGTTTAGTCCCTGGGGAGTCTGG  500

seq1  TTCATTGATATTGTTGTTCTTCCTATGAGGTTGCAAACCCCTTCAACTCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTGATATTGTTGTTCTTCCTATGAGGTTGCAAACCCCTTCAACTCT  550

seq1  TACAGTCCTTACCCTAACTTCCCCATTGAGATCCCCACACTCAGTCCAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTCCTTACCCTAACTTCCCCATTGAGATCCCCACACTCAGTCCAAT  600

seq1  GTTTGGTTGTGTATATCCACAGCTGCATTGGTCCAGATCTGGTAGAGTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTGGTTGTGTATATCCACAGCTGCATTGGTCCAGATCTGGTAGAGTCT  650

seq1  CTCAGGGAATAGCTATACTAGGCTCCTGTCAGTAAGCA  688
      ||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGGAATAGCTATACTAGGCTCCTGTCAGTAAGCA  688