BAC Information

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BAC

Clone NameB6Ng01-128F09
Chromosome19 (Build37)
Map Location 23,542,592 - 23,682,273
singlet/doubletdoublet
Overlap gene1700028P14Rik
Upstream geneTrpm3, Klf9, Smc5, Mamdc2
Downstream geneLOC670565, LOC226030, EG625193, Ptar1, Apba1, Gm967, 1700021P04Rik, Tjp2, Fxn, LOC667743, Pip5k1b, LOC100042457, 2900009I07Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-128F09.bB6Ng01-128F09.g
ACCDH930215DH930216
length1,0011,035
definitionDH930215|Mus musculus domesticus DNA, BAC clone: B6Ng01-128F09, 5' end.DH930216|Mus musculus domesticus DNA, BAC clone: B6Ng01-128F09, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(23,681,279 - 23,682,273)(23,542,592 - 23,543,635)
sequence
gaattctcaaaagtttaaattaaaaattttcaattcaccatttctctgcc
ctccatttagttcctttcactgaggctgtggctacccaaaggaggccata
acttatctctaatattattttcttcacttaaacattttgtttaaaatcaa
cttatgaagccacagctgaaaagatggctcagtggttaagagcacttcct
ggacccaggtttagttctaagtatccacatgacagctcacagctacctga
aactccagttccaggggatccagggccctctctgtcctccacaggcacca
ggcacacatgtggtacacaggcatgtatgtaggcaaaacacaaatattta
aacaaagaaaaaagcaaagtaacaggcttatatacgacattttcacacac
acttccttttggttgactcagtccctgcccaccatgccacctcatttccc
tgtctcctttctcccttcttcccttttgcctcattttcctcttcccacaa
agtctgttgtctccccccaccccttcccctttccttaaagcaccttcctt
ttttctttataatttcatggaggtttcaaaggagtttctagtttcctggc
ctttacatatttactcccacatagatataaatatttaacagttacaggct
agaatctgcatacgagagagagcatatggcatttgtccttctgagcctgg
tttgcattgcttaatacaatgttttttccatccagtttcttgctagtttc
atttttcttcatggccaaattctattccactgtatatatgtaaaataatc
ctgtgcaagtaccatcaattttatggtcagttttggaccataaaaagcct
attggtttgcattccaataattagaatatcacatcaaaaatgatgaattt
catctaaagccaaagcttttctcttctatcaatacacacagcttcactct
aggtctagaaaaagactgcagggggataaggaggtgaaggtaaggaggtg
a
gaattcaggcatccttttccaagaatctctcaaatgcatgacattcaaag
gccactctgaagttgaagaaggtagcctaatcctttacatataagtggca
tttgttttactttaagaggaaaaaaatgataaatccgtcaagactttcag
gcctaaattgctttcaaagaccccagagttaattaaaggaggacaatata
caaaagaaggtgaccttttccatttaagctataaatatgccattgttaag
gaatttcattacagcagagaatacaatgagcaattgtagctgagttcagc
atttgacttcagatgacggattggtagagtggtcgttatcattttaagta
gttaaaatattgtcactaagccattcttctaaaatggacatgagcattaa
aaataaattaatatattctaaagcaataagtttttgtttagactttaggg
gttatattaatgatttattgttcttccttcagctaaaatgttaatcagag
gggaagaattatggtgttgactgggtctcactaaatccttccttggagtt
acatggacccttattacgttaccctgttgaagggaatttgttttacattg
ataaataggcaaaacaaaatttgccattgtagtgtgagggaaaaaatgct
gtattttaagagcaaacatccattataatgcggtgacaaagtcaaagtag
ccattctgagcacaaggaaactccaaaccccgggggataacggtagaaaa
gaaatctcccattttcctaaaatctgatctcaagttccaagtacttttcc
ttcaacagttctaaaaatctttttacagtcaattcaaaaacgaattgaag
gaaaacaaaagcttgtctggatgcccagtctgttctattaaaaactcatg
gtcaattcatgattaacaagttttctttgttagccttactgatccagacc
agtttgcttggtggcagaatacttacttgcattaagggctcactctgcac
agtaccgtatggtagaatactaactacggtttgaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_23681279_23682273
seq2: B6Ng01-128F09.b_49_1049 (reverse)

seq1  TCACCTCC-TACC-TCACCTCCTTATCCCCCTGCAGTC-TTTTCTAGACC  47
      |||||||| |||| |||||||||||||||||||||||| |||||||||||
seq2  TCACCTCCTTACCTTCACCTCCTTATCCCCCTGCAGTCTTTTTCTAGACC  50

seq1  TAGAGTG-AGCTGTGTGTATTGATAGAAGAGAAAAGCTTTGGCTTTAGAT  96
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGTGAAGCTGTGTGTATTGATAGAAGAGAAAAGCTTTGGCTTTAGAT  100

seq1  GAAATTCATCA-TTTTGATGTGATATTCTAATTATTGGAATGC-AACCAA  144
      ||||||||||| ||||||||||||||||||||||||||||||| ||||||
seq2  GAAATTCATCATTTTTGATGTGATATTCTAATTATTGGAATGCAAACCAA  150

seq1  TAGGCTTTTTATGGTCCAAAACTGACCATAAAATTGATGGTACTTGCACA  194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGCTTTTTATGGTCCAAAACTGACCATAAAATTGATGGTACTTGCACA  200

seq1  GGATTATTTTACATATATACAGTGGAATAGAATTTGGCCATGAAGAAAAA  244
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTATTTTACATATATACAGTGGAATAGAATTTGGCCATGAAGAAAAA  250

seq1  TGAAACTAGCAAGAAACTGGATGGAAAAAACATTGTATTAAGCAATGCAA  294
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAACTAGCAAGAAACTGGATGGAAAAAACATTGTATTAAGCAATGCAA  300

seq1  ACCAGGCTCAGAAGGACAAATGCCATATGCTCTCTCTCGTATGCAGATTC  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAGGCTCAGAAGGACAAATGCCATATGCTCTCTCTCGTATGCAGATTC  350

seq1  TAGCCTGTAACTGTTAAATATTTATATCTATGTGGGAGTAAATATGTAAA  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCTGTAACTGTTAAATATTTATATCTATGTGGGAGTAAATATGTAAA  400

seq1  GGCCAGGAAACTAGAAACTCCTTTGAAACCTCCATGAAATTATAAAGAAA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAGGAAACTAGAAACTCCTTTGAAACCTCCATGAAATTATAAAGAAA  450

seq1  AAAGGAAGGTGCTTTAAGGAAAGGGGAAGGGGTGGGGGGAGACAACAGAC  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGAAGGTGCTTTAAGGAAAGGGGAAGGGGTGGGGGGAGACAACAGAC  500

seq1  TTTGTGGGAAGAGGAAAATGAGGCAAAAGGGAAGAAGGGAGAAAGGAGAC  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTGGGAAGAGGAAAATGAGGCAAAAGGGAAGAAGGGAGAAAGGAGAC  550

seq1  AGGGAAATGAGGTGGCATGGTGGGCAGGGACTGAGTCAACCAAAAGGAAG  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATGAGGTGGCATGGTGGGCAGGGACTGAGTCAACCAAAAGGAAG  600

seq1  TGTGTGTGAAAATGTCGTATATAAGCCTGTTACTTTGCTTTTTTCTTTGT  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTGTGAAAATGTCGTATATAAGCCTGTTACTTTGCTTTTTTCTTTGT  650

seq1  TTAAATATTTGTGTTTTGCCTACATACATGCCTGTGTACCACATGTGTGC  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATATTTGTGTTTTGCCTACATACATGCCTGTGTACCACATGTGTGC  700

seq1  CTGGTGCCTGTGGAGGACAGAGAGGGCCCTGGATCCCCTGGAACTGGAGT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCCTGTGGAGGACAGAGAGGGCCCTGGATCCCCTGGAACTGGAGT  750

seq1  TTCAGGTAGCTGTGAGCTGTCATGTGGATACTTAGAACTAAACCTGGGTC  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGGTAGCTGTGAGCTGTCATGTGGATACTTAGAACTAAACCTGGGTC  800

seq1  CAGGAAGTGCTCTTAACCACTGAGCCATCTTTTCAGCTGTGGCTTCATAA  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGTGCTCTTAACCACTGAGCCATCTTTTCAGCTGTGGCTTCATAA  850

seq1  GTTGATTTTAAACAAAATGTTTAAGTGAAGAAAATAATATTAGAGATAAG  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATTTTAAACAAAATGTTTAAGTGAAGAAAATAATATTAGAGATAAG  900

seq1  TTATGGCCTCCTTTGGGTAGCCACAGCCTCAGTGAAAGGAACTAAATGGA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGGCCTCCTTTGGGTAGCCACAGCCTCAGTGAAAGGAACTAAATGGA  950

seq1  GGGCAGAGAAATGGTGAATTGAAAATTTTTAATTTAAACTTTTGAGAATT  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAGAAATGGTGAATTGAAAATTTTTAATTTAAACTTTTGAGAATT  1000

seq1  C  995
      |
seq2  C  1001

seq1: chr19_23542592_23543635
seq2: B6Ng01-128F09.g_70_1104

seq1  GAATTCAGGCATCCTTTTCCAAGAATCTCTCAAATGCATGACATTCAAAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGGCATCCTTTTCCAAGAATCTCTCAAATGCATGACATTCAAAG  50

seq1  GCCACTCTGAAGTTGAAGAAGGTAGCCTAATCCTTTACATATAAGTGGCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACTCTGAAGTTGAAGAAGGTAGCCTAATCCTTTACATATAAGTGGCA  100

seq1  TTTGTTTTACTTTAAGAGGAAAAAAATGATAAATCCGTCAAGACTTTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGTTTTACTTTAAGAGGAAAAAAATGATAAATCCGTCAAGACTTTCAG  150

seq1  GCCTAAATTGCTTTCAAAGACCCCAGAGTTAATTAAAGGAGGACAATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAATTGCTTTCAAAGACCCCAGAGTTAATTAAAGGAGGACAATATA  200

seq1  CAAAAGAAGGTGACCTTTTCCATTTAAGCTATAAATATGCCATTGTTAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAGGTGACCTTTTCCATTTAAGCTATAAATATGCCATTGTTAAG  250

seq1  GAATTTCATTACAGCAGAGAATACAATGAGCAATTGTAGCTGAGTTCAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTTCATTACAGCAGAGAATACAATGAGCAATTGTAGCTGAGTTCAGC  300

seq1  ATTTGACTTCAGATGACGGATTGGTAGAGTGGTCGTTATCATTTTAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGACTTCAGATGACGGATTGGTAGAGTGGTCGTTATCATTTTAAGTA  350

seq1  GTTAAAATATTGTCACTAAGCCATTCTTCTAAAATGGACATGAGCATTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAAATATTGTCACTAAGCCATTCTTCTAAAATGGACATGAGCATTAA  400

seq1  AAATAAATTAATATATTCTAAAGCAATAAGTTTTTGTTTAGACTTTAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAATTAATATATTCTAAAGCAATAAGTTTTTGTTTAGACTTTAGGG  450

seq1  GTTATATTAATGATTTATTGTTCTTCCTTCAGCTAAAATGTTAATCAGAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATATTAATGATTTATTGTTCTTCCTTCAGCTAAAATGTTAATCAGAG  500

seq1  GGGAAGAATTATGGTGTTGACTGGGTCTCACTAAATCCTTCCTTGGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAGAATTATGGTGTTGACTGGGTCTCACTAAATCCTTCCTTGGAGTT  550

seq1  ACATGGACCCTTATTACGTTACCCTGTTGAAGGGAATTTGTTTTACATTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGACCCTTATTACGTTACCCTGTTGAAGGGAATTTGTTTTACATTG  600

seq1  ATAAATAGGCAAAACAAAATTTGCCATTGTAGTGTGAGGGAAAAAATGCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATAGGCAAAACAAAATTTGCCATTGTAGTGTGAGGGAAAAAATGCT  650

seq1  GTATTTTAAGAGCAAACATCCATTATAATGCGGTGACAAAGTCAAAGTAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTTAAGAGCAAACATCCATTATAATGCGGTGACAAAGTCAAAGTAG  700

seq1  CCATTCTGAGCACAAGGAAACTCCAAACCCCGGGGGATAACGGTAGAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTCTGAGCACAAGGAAACTCCAAACCCCGGGGGATAACGGTAGAAAA  750

seq1  GAAATCTCCCATTTTCCTAAAATCTGATCTCAAGTTCCAAGTAC-TTTCC  799
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAAATCTCCCATTTTCCTAAAATCTGATCTCAAGTTCCAAGTACTTTTCC  800

seq1  TTCAACAGTTCTAAAAATCTTTTAACAGTCAATTCAAAAACGAATTGAAG  849
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TTCAACAGTTCTAAAAATCTTTTTACAGTCAATTCAAAAACGAATTGAAG  850

seq1  GAAAACAAAAAGCTGTCTGGATGCCCAGTCTGTTCCTATTAAAAACTCAT  899
      ||||||||||   ||||||||||||||||||||| |||||||||||||||
seq2  GAAAACAAAAGCTTGTCTGGATGCCCAGTCTGTT-CTATTAAAAACTCAT  899

seq1  GGTCAATTCCATGATTAACAAGTTTTTCTTTGTTAAGCCTTACTGATCCC  949
      |||||||| ||||||||||||| ||||||||||| |||||||||||| ||
seq2  GGTCAATT-CATGATTAACAAG-TTTTCTTTGTT-AGCCTTACTGAT-CC  945

seq1  AGACCAGCCTGGCTTGGTGGCAGAATACTTACTCTGCATCAGGGGCTCAC  999
      |||||||  | |||||||||||||||||||||| ||||| | ||||||||
seq2  AGACCAG-TTTGCTTGGTGGCAGAATACTTACT-TGCATTAAGGGCTCAC  993

seq1  TCTGCACCAGTACCGTAGTGGTAGAATTACTAACTACAGTTTGAA  1044
      |||||| |||||||||| |||||||| |||||||||| |||||||
seq2  TCTGCA-CAGTACCGTA-TGGTAGAA-TACTAACTACGGTTTGAA  1035