BAC Information

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BAC

Clone NameB6Ng01-132I17
Chromosome19 (Build37)
Map Location 13,154,050 - 13,273,066
singlet/doubletdoublet
Overlap geneOlfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462
Upstream geneOlfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1
Downstream geneOlfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132I17.bB6Ng01-132I17.g
ACCDH933320DH933321
length1,165558
definitionDH933320|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I17, 5' end.DH933321|Mus musculus domesticus DNA, BAC clone: B6Ng01-132I17, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,271,926 - 13,273,066)(13,154,050 - 13,154,613)
sequence
gaattctttgtttacctctgtacaccattttaattggtttatttgatttt
ctgtagtctaatttcttgagttctttgtatattttgagtattaatcctct
atcagatgtaggattaataaagatattttcccaatctataagtggctgtt
ttgtcctattgacagtgtgctatgcccagtttgtgaggtactccaaaaga
gaccaccaggagccacaactctgatgcaagcacatgaaagtttttattca
ggctcaagcctgggccacaaattttactgatgcaacaggaaaggagagaa
gccccaaggtctatgggatgtggtttataaagaaaaaaactgcaaggggt
tgtgggggacagtccaagtcaaggtattttgtgagagggtaaaggaatgt
tggcctttaagctgattggttcatagcatccagtcaaaccacaaggaggc
acaacatatcaaaaaggagcatcttgacctgtgaacaactcacatttctt
tagcccacgctgttatcatcagctaccaatatttcatgggtttttctcag
aactcaagggtgggagccaaatcattctgaggacaattaacttaaaatgg
agagtgaaaagtaaaatgaactttattctgctactttaatccatttacgt
gtactttccctaacagaagcttaaagaaaaaaattaaagatgttctagaa
tttaatgaaaacgaaggcacaacatacccaaactttatggagcacaatga
aagcagtgctaagaggaaaattcatagcactaagtacctccataaacaaa
ttagagggatccttcactaacaacttaacagcacatctgaaagctctaga
acacaataagcaaacacacctgagaggagtagatgacaggaaataatcaa
actgagggctaaaatcaactaagtagaaacaaaaagaactatacaaagaa
tcaagaaactaagagcaggctctttgaaaaaactcagcaagttagataac
ccttagccagactaacagagggcaagagacagtatcaaattacaaatcag
aaataaaaagggagaacataataatagacctgagcaatcaaaatttcatt
cagattctactacaaaggtctatactcaccaaaactggcaaatcctaaat
gaaatggaatggttt
cttacccaacatgaaatttttatcggtatactgaaatggagattatttga
taatttgataaaatttaagtgtggatgatttccaactcagtgctgagctc
aggaaaatctcactttttctgctgtttgtttttttcccaaggacttctct
agagtggaactttaaatgagcattctatctatccccttaattatattaga
attacatgattttttcaccttatggacacaaggggttgaataatttattt
gtattttaagtataaaatgtcagacactactttgagtccttgattttatt
taaccttttttgattcccaagtatgaagggccaaacagaattttaattaa
attgaagatgtgataaaaacatatttacatgtttacattgtcaagaactc
agcattacttgaattccagaattctgtttctgtttctaagcatgtgttcc
ttgttcaatcctttgtcttgggaaacaagggcctgcaaaaaggttccttc
tgaaataatcaccgtggctttgaattgaggagaaggggaggggagatggg
gaaaggat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13271926_13273066
seq2: B6Ng01-132I17.b_80_1214 (reverse)

seq1  AAACCA-TCCATTTCATCTA-GATTTTCCAGTTTTGTTGAGTATAGACTT  48
      |||||| |||||||||| || ||||| ||||||||| ||||||||||| |
seq2  AAACCATTCCATTTCATTTAGGATTTGCCAGTTTTGGTGAGTATAGACCT  50

seq1  TTGTAGTAGAATCTG-ATGATATTTTGAATTTCCTCAGTGTCTATTATTA  97
      ||||||||||||||| |||| |||||||  || ||||| |||||||||||
seq2  TTGTAGTAGAATCTGAATGAAATTTTGA--TTGCTCAG-GTCTATTATTA  97

seq1  TG-TCTCCCTTTTTATTTCTGATTTGTTAATTTGGATACTGTCTCTGTGC  146
      || ||||||||||||||||||||||| |||||| |||||||||||| |||
seq2  TGTTCTCCCTTTTTATTTCTGATTTG-TAATTT-GATACTGTCTCT-TGC  144

seq1  CCTCTTGTTAGTCTGGCTAAGGGTTTATCTAACTTGCTGAGTTTTTTTCA  196
      |||| |||||||||||||||||| ||||||||||||||||| ||||||||
seq2  CCTC-TGTTAGTCTGGCTAAGGG-TTATCTAACTTGCTGAG-TTTTTTCA  191

seq1  AAGAGCCTGCTCTTAGTTTTCTTGATTCTTTGTATAGTTCTTTTTGTTTC  246
      |||||||||||||||| |||||||||||||||||||||||||||||||||
seq2  AAGAGCCTGCTCTTAG-TTTCTTGATTCTTTGTATAGTTCTTTTTGTTTC  240

seq1  TACTTAGTTGATTTTAGCCCTCAGTTTGATTATTTCCTGTCATCTACTCC  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGTTGATTTTAGCCCTCAGTTTGATTATTTCCTGTCATCTACTCC  290

seq1  TCTCAGGTGTGTTTGCTTATTTGTGTTCTAGAGCTTTCAGATGTGCTGTT  346
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TCTCAGGTGTGTTTGCTTA-TTGTGTTCTAGAGCTTTCAGATGTGCTGTT  339

seq1  AAGTTGTTAGTGAAGGATCCCTCTAATTTGTTTATGGAGGTACTTAGTGC  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTGTTAGTGAAGGATCCCTCTAATTTGTTTATGGAGGTACTTAGTGC  389

seq1  TATGAATTTTCCTCTTAGCACTGCTTTCATTGTGCTCCAT-AAGTTTGGG  445
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TATGAATTTTCCTCTTAGCACTGCTTTCATTGTGCTCCATAAAGTTTGGG  439

seq1  TATGTTGTGCCTTCGTTTTCATTAAATTCTAGAACATCTTTAATTTTTTT  495
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGTGCCTTCGTTTTCATTAAATTCTAGAACATCTTTAATTTTTTT  489

seq1  CTTTAAGCTTCTGTTAGGGAAAGTACACGTAAATGGATTAAAGTAGCAGA  545
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTAAGCTTCTGTTAGGGAAAGTACACGTAAATGGATTAAAGTAGCAGA  539

seq1  ATAAAGTTCATTTTACTTTTCACTCTCCATTTTAAGTTAATTGTCCTCAG  595
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGTTCATTTTACTTTTCACTCTCCATTTTAAGTTAATTGTCCTCAG  589

seq1  AATGATTTGGCTCCCACCCTTGAGTTCTGAGAAAAACCCATGAAATATTG  645
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGATTTGGCTCCCACCCTTGAGTTCTGAGAAAAACCCATGAAATATTG  639

seq1  GTAGCTGATGATAACAGCGTGGGCTAAAGAAATGTGAGTTGTTCACAGGT  695
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGCTGATGATAACAGCGTGGGCTAAAGAAATGTGAGTTGTTCACAGGT  689

seq1  CAAGATGCTCCTTTTTGATATGTTGTGCCTCCTTGTGGTTTGACTGGATG  745
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGATGCTCCTTTTTGATATGTTGTGCCTCCTTGTGGTTTGACTGGATG  739

seq1  CTATGAACCAATCAGCTTAAAGGCCAACATTCCTTTACCCTCTCACAAAA  795
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGAACCAATCAGCTTAAAGGCCAACATTCCTTTACCCTCTCACAAAA  789

seq1  TACCTTGACTTGGACTGTCCCCCACAACCCCTTGCAGTTTTTTTCTTTAT  845
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTTGACTTGGACTGTCCCCCACAACCCCTTGCAGTTTTTTTCTTTAT  839

seq1  AAACCACATCCCATAGACCTTGGGGCTTCTCTCCTTTCCTGTTGCATCAG  895
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCACATCCCATAGACCTTGGGGCTTCTCTCCTTTCCTGTTGCATCAG  889

seq1  TAAAATTTGTGGCCCAGGCTTGAGCCTGAATAAAAACTTTCATGTGCTTG  945
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTTGTGGCCCAGGCTTGAGCCTGAATAAAAACTTTCATGTGCTTG  939

seq1  CATCAGAGTTGTGGCTCCTGGTGGTCTCTTTTGGAGTACCTCACAAACTG  995
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCAGAGTTGTGGCTCCTGGTGGTCTCTTTTGGAGTACCTCACAAACTG  989

seq1  GGCATAGCACACTGTCAATAGGACAAAACAGCCACTTATAGATTGGGAAA  1045
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATAGCACACTGTCAATAGGACAAAACAGCCACTTATAGATTGGGAAA  1039

seq1  ATATCTTTATTAATCCTACATCTGATAGAGGATTAATACTCAAAATATAC  1095
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCTTTATTAATCCTACATCTGATAGAGGATTAATACTCAAAATATAC  1089

seq1  AAAGAACTCAAGAAATTAGACTACAGAAAATCAAATAAACCAATTA  1141
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAACTCAAGAAATTAGACTACAGAAAATCAAATAAACCAATTA  1135

seq1: chr19_13154050_13154613
seq2: B6Ng01-132I17.g_64_627

seq1  GAATTCCTTACCCAACATGAAATTTTTATCGGTATACTGAAATGGAGATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTACCCAACATGAAATTTTTATCGGTATACTGAAATGGAGATT  50

seq1  ATTTGATAATTTGATAAAATTTAAGTGTGGATGATTTCCAACTCAGTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATAATTTGATAAAATTTAAGTGTGGATGATTTCCAACTCAGTGCT  100

seq1  GAGCTCAGGAAAATCTCACTTTTTCTGCTGTTTGTTTTTTTCCCAAGGAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCTCAGGAAAATCTCACTTTTTCTGCTGTTTGTTTTTTTCCCAAGGAC  150

seq1  TTCTCTAGAGTGGAACTTTAAATGAGCATTCTATCTATCCCCTTAATTAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCTAGAGTGGAACTTTAAATGAGCATTCTATCTATCCCCTTAATTAT  200

seq1  ATTAGAATTACATGATTTTTTCACCTTATGGACACAAGGGGTTGAATAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGAATTACATGATTTTTTCACCTTATGGACACAAGGGGTTGAATAAT  250

seq1  TTATTTGTATTTTAAGTATAAAATGTCAGACACTACTTTGAGTCCTTGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTGTATTTTAAGTATAAAATGTCAGACACTACTTTGAGTCCTTGAT  300

seq1  TTTATTTAACCTTTTTTGATTCCCAAGTATGAAGGGCCAAACAGAATTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAACCTTTTTTGATTCCCAAGTATGAAGGGCCAAACAGAATTTT  350

seq1  AATTAAATTGAAGATGTGATAAAAACATATTTACATGTTTACATTGTCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTAAATTGAAGATGTGATAAAAACATATTTACATGTTTACATTGTCAA  400

seq1  GAACTCAGCATTACTTGAATTCCAGAATTCTGTTTCTGTTTCTAAGCATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCAGCATTACTTGAATTCCAGAATTCTGTTTCTGTTTCTAAGCATG  450

seq1  TGTTCCTTGTTCAATCCTTTGTCTTGGGAAACAAGGGCCTGCAAAAAGGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCCTTGTTCAATCCTTTGTCTTGGGAAACAAGGGCCTGCAAAAAGGT  500

seq1  TCCTTCTGAAATAATCACCGTGGCTTTGAATTGAGGAGAAGGGGAGGGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGAAATAATCACCGTGGCTTTGAATTGAGGAGAAGGGGAGGGGA  550

seq1  GATGGGGAAAGGAT  564
      ||||||||||||||
seq2  GATGGGGAAAGGAT  564