BAC Information

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BAC

Clone NameB6Ng01-137D15
Chromosome19 (Build37)
Map Location 43,214,968 - 43,215,970
singlet/doubletsinglet
Overlap geneLOC545291
Upstream geneMarveld1, EG628994, LOC100042633, Zfyve27, Sfrp5, 4933417O08Rik, Crtac1, D19Ertd386e, Loxl4, 4833409A17Rik, Hps1
Downstream geneEG627624, Cnnm1, Got1, Nkx2-3, LOC100042700, LOC100043245, Slc25a28, Entpd7, Cox15, Cutc, Abcc2, Dnmbp, LOC668408, Cpn1, Cyp2c44, Erlin1, Chuk, Cwf19l1, Bloc1s2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137D15.bB6Ng01-137D15.g
ACCDH936797DH936798
length997641
definitionDH936797|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D15, 5' end.DH936798|Mus musculus domesticus DNA, BAC clone: B6Ng01-137D15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacagataagtaccaaccttctagccttacatacttacttactta
cttatttatttatttatttatttatttatttatttatttatttatttatt
ttaagtcccaatatcagtgcctccatcctcccggattcactttaagtccc
aatatcagtgcctccgtcctcccggtacttcatcacacagattctccacc
aaagtggctctggggatgggagggggttgatgaagacatcccgtttagga
ctgagtgctccaaagtatctcactctgaaacatttctagttgtgggtctc
tatgttagttccagtctattacaagaaaaaaaaagcatttttgatgaaag
ctgagcaaggcatttatttatgggtacagcagtatgtcattggagatcat
tttattgctatgtcctttttgctgaataatagtagtaggtttttcatcag
ccaatgatctgtgtagtctcaggttcttaaccactttagcagagtcaggt
attgcttcttatctcatagaggggaccttaaattcaatcagaaaatagta
ggttacataggaacatttgtgacactattgtatgagtatcctgatttacc
acctattattagagacctttagttatgccagtaaacagcctccttacaac
ttttaagtggttacctaatagtctgtcacatgggtctggtttattgatgc
atctgtatgattgacatttcttttctgcttgtttaaaaactttaactgaa
gaggtagtacctttttgcatacatttttgtctgcacttcagcatatttgg
taggtgaaactgaagttaccaagttaaaaatattagattaaaaaatacca
tattttactactttcagaaagaatattgtgtttcttaatggtggtttgta
aaaataaagaaaaagaatataaaagttattgtgcaaagttatagctaatg
aaacaacagatcctgaatacaaaattgaatacagatccttaaataca
ttcatctgtgactttatggagtgcaggccagcagaggcagttaaagccat
taaaggagtcagaagccagaattgctcctgtctaaaaggattgcagggac
gaaaatggagatgagactgagggaaggcagtccagtgacaggcccaactt
gggctccatctcaaggggaagttccaagacctgacactgatgctatggtg
tgcttacagacaggagcctagcatggttgtcctctgagagggccaacaag
cagctgactgagacagatgcagatccttacacccaaccaatggactgaag
ctatagaaccctatggttgaattagggaaaggctagaacaagctgaggag
gaggaagaccccataggaagaccagcagtctcaattaacctggacccctg
agatctctcagacactgagccaccaaccaggcagcatacatgagctagtc
caagacacctgatacatgtagagcagaggattgcctggtctggcttcaat
gggagaagatgtgcctaactttcaggagatttgaggccccagggagtgga
ggcctggaggtggggtgtgggggccatcctctgagagacagggggatgag
aaactatgggagggtggactgggaggtagggaaagggttgg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_43214968_43215970
seq2: B6Ng01-137D15.b_47_1043 (reverse)

seq1  TGTATTTAAGGATCTTGTATTCAAGTATTGTATTTCAGGATCTGTTGTTT  50
      |||||||||||||| ||||||||| | ||||| |||||||||||||||||
seq2  TGTATTTAAGGATC-TGTATTCAA-TTTTGTA-TTCAGGATCTGTTGTTT  47

seq1  CATTAGCTTATAACTTTTGCACAATAAACTTTTTATATTCTTTTTCTTTA  100
      ||||||| |||||| ||||||||||||   ||||||||||||||||||||
seq2  CATTAGC-TATAAC-TTTGCACAATAA--CTTTTATATTCTTTTTCTTTA  93

seq1  TTTTTACAAAACACCATTAAGGAACACAATATTC-TTCTGTAAGTAGTAA  149
      |||||||||| |||||||||| |||||||||||| ||||| |||||||||
seq2  TTTTTACAAACCACCATTAAGAAACACAATATTCTTTCTGAAAGTAGTAA  143

seq1  AATATGGTATTTTTTAATCTAATATTTTTAACTTGGTAACTTCAGTTTCA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGGTATTTTTTAATCTAATATTTTTAACTTGGTAACTTCAGTTTCA  193

seq1  CCTACCAAATATGCTGAAGTGCAGACAAAAATGTATGCAAAAAGGTACTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACCAAATATGCTGAAGTGCAGACAAAAATGTATGCAAAAAGGTACTA  243

seq1  CCTCTTCAGTTAAAGTTTTTAAACAAGCAGAAAAGAAATGTCAATCATAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTTCAGTTAAAGTTTTTAAACAAGCAGAAAAGAAATGTCAATCATAC  293

seq1  AGATGCATCAATAAACCAGACCCATGTGACAGACTATTAGGTAACCACTT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCATCAATAAACCAGACCCATGTGACAGACTATTAGGTAACCACTT  343

seq1  AAAAGTTGTAAGGAGGCTGTTTACTGGCATAACTAAAGGTCTCTAATAAT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTTGTAAGGAGGCTGTTTACTGGCATAACTAAAGGTCTCTAATAAT  393

seq1  AGGTGGTAAATCAGGATACTCATACAATAGTGTCACAAATGTTCCTATGT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTGGTAAATCAGGATACTCATACAATAGTGTCACAAATGTTCCTATGT  443

seq1  AACCTACTATTTTCTGATTGAATTTAAGGTCCCCTCTATGAGATAAGAAG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTACTATTTTCTGATTGAATTTAAGGTCCCCTCTATGAGATAAGAAG  493

seq1  CAATACCTGACTCTGCTAAAGTGGTTAAGAACCTGAGACTACACAGATCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATACCTGACTCTGCTAAAGTGGTTAAGAACCTGAGACTACACAGATCA  543

seq1  TTGGCTGATGAAAAACCTACTACTATTATTCAGCAAAAAGGACATAGCAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGCTGATGAAAAACCTACTACTATTATTCAGCAAAAAGGACATAGCAA  593

seq1  TAAAATGATCTCCAATGACATACTGCTGTACCCATAAATAAATGCCTTGC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATGATCTCCAATGACATACTGCTGTACCCATAAATAAATGCCTTGC  643

seq1  TCAGCTTTCATCAAAAATGCTTTTTTTTTCTTGTAATAGACTGGAACTAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTTCATCAAAAATGCTTTTTTTTTCTTGTAATAGACTGGAACTAA  693

seq1  CATAGAGACCCACAACTAGAAATGTTTCAGAGTGAGATACTTTGGAGCAC  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGACCCACAACTAGAAATGTTTCAGAGTGAGATACTTTGGAGCAC  743

seq1  TCAGTCCTAAACGGGATGTCTTCATCAACCCCCTCCCATCCCCAGAGCCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGTCCTAAACGGGATGTCTTCATCAACCCCCTCCCATCCCCAGAGCCA  793

seq1  CTTTGGTGGAGAATCTGTGTGATGAAGTACCGGGAGGACGGAGGCACTGA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGTGGAGAATCTGTGTGATGAAGTACCGGGAGGACGGAGGCACTGA  843

seq1  TATTGGGACTTAAAGTGAATCCGGGAGGATGGAGGCACTGATATTGGGAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTGGGACTTAAAGTGAATCCGGGAGGATGGAGGCACTGATATTGGGAC  893

seq1  TTAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAA  943

seq1  TAAGTAAGTAAGTAAGTATGTAAGGCTAGAAGGTTGGTACTTATCTGTGA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTAAGTAAGTAAGTATGTAAGGCTAGAAGGTTGGTACTTATCTGTGA  993

seq1  ATTC  1003
      ||||
seq2  ATTC  997