BAC Information

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BAC

Clone NameB6Ng01-139J08
Chromosome19 (Build37)
Map Location 14,265,865 - 14,371,952
singlet/doubletdoublet
Overlap genenone
Upstream geneOlfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
Downstream geneEG667433, Tle4, EG433225, EG635497
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139J08.bB6Ng01-139J08.g
ACCDH938530DH938531
length1,1111,108
definitionDH938530|Mus musculus domesticus DNA, BAC clone: B6Ng01-139J08, 5' end.DH938531|Mus musculus domesticus DNA, BAC clone: B6Ng01-139J08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(14,265,865 - 14,267,003)(14,370,810 - 14,371,952)
sequence
gaattccagtggagaactgaatgctctgaaatagaaagaattttatgtaa
agcaaaatactttctttttatgttacataattttttaataattttcagaa
tccctaaaaataattatgccaaggaccaaaaagacaattaacacaaattc
aatggccattattttgtcttttgttacagtttcagttttctcaagtattc
tttaaatttgaaggacctaaaatttttaacaatattaatttcatacttcc
caaacactaactttataattactttatactttgagaaacacttttactgt
cctcaatgagtgactgatttcacccacttgtcagtgtcttccttcttatt
cccatacaattttcaatttcagacacctcctattgaaaaagccttctaac
aatttcctaattataagtattatgaatgtaaatgagtagctatagaaaat
ggcctaactaatatatgcattagagagaatatactgttaaattataaaac
tgaagattttaatgacagaataaggaaatgttgaaaggcataaaattgca
taaaaataaattaaaattaaaatcaagcatattgtctcctctcttcagag
aagagcagctgtttctatgctgtacttcctgaaagagctgatgtctgcag
tgcggtctggttcctctgtgtatgtatgcatacacaaatttgtcacattt
acaacccatgaatacgcggaaaacagcaggctgaattgacattgttttct
ttctaaaatatctccttttggcacacaattaaagatgaagactatccaat
aagaaaaacaaattctaaaattatgaagttataatatttggaagtacaaa
tttcttaagatgttttccggcattcaacaaatgagtcaatttcagaaaat
cttattaggagaaagcaaccctttagatagacatgtgttataatttgccc
aggacgactctgttgctgctgatgcaatactatatatgtgctactctata
gaggaaaactacaaatcctcaatgtgaaacatctgttgtagcatcacatg
ctgctgttaccagagaccaatggacatgccactgtgccaaagaagtccta
tgctcatctca
gaattcctgagtatatttttgtctcatcaaagacaattattgaaaaattc
atgtttgaatgggaaaactaacagaaatgtaaggaaacgacacatgttca
tatgattaacaaattcagaccttcctatagctcacataagcaactgcctg
atttgtgtgttatcgtttccccctttgagatatttgtttgctagatgttc
aaggggactgcagccaggttatatagatggggtcatggtactggtgttac
acacagctcagtcttattccttcatcctgtgtgtcttatattgtctccca
agtcagctccttggaggatttctggtgggcccagcaatgggacatctatc
cagacttcaaagttaagcagatttgaggtggaccttgaaagggctgataa
ggcattttcatggactcccctgcatcttattttcaacttaaacacacatg
ttcaccatttctgaagttagtgcatatgtatgcttgaatattcatttcga
aataagatcacttcaccacaattagttcttaaaagctatagataaagtaa
catgaagaaatcagtattgctgaatacatacatagaaggagcacctaact
ggaggttttgataagtttactgtatttcacaaaatgaacaggatggctgc
cttcctctgatgaatgcctgtgtgaaataatgcagtgggggagaaaatga
ggccaagttccaactggggttgacagatctccaagaagatttatccttct
ttgcctcagattaatctttgaagttagagattataaaaagctgtcaactt
ttgatatcaccatgaattgaatgtggtaggaagtgtatcctaagtgaagt
atttcttaagaatggtttaatatataatatgatgatgatgatgatgatga
tagcacagcacaaagtcatttttctttgttgtcattgcagatgtgcagtg
catcagtgtgtgattctcgcatcccagctctctgtgtctatgctgaactg
actctgttataggtcagtttctttccctaatgtgcttctttcaatgatga
tgaggtcttaaaatcttctccaagtaagtcttttctgtctgtccactcac
ttgagacc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14265865_14267003
seq2: B6Ng01-139J08.b_43_1153

seq1  GAATTCCAGTGGAGAACTGAATGCTCTGAAATAGAAAGAATTTTATGTAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGTGGAGAACTGAATGCTCTGAAATAGAAAGAATTTTATGTAA  50

seq1  AGCAAAATACTTTCTTTTTATGTTACATAATTTTTTAATAATTTTCAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAAATACTTTCTTTTTATGTTACATAATTTTTTAATAATTTTCAGAA  100

seq1  TCCCTAAAAATAATTATGCCAAGGACCAAAAAGACAATTAACACAAATTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTAAAAATAATTATGCCAAGGACCAAAAAGACAATTAACACAAATTC  150

seq1  AATGGCCATTATTTTGTCTTTTGTTACAGTTTCAGTTTTCTCAAGTATTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGGCCATTATTTTGTCTTTTGTTACAGTTTCAGTTTTCTCAAGTATTC  200

seq1  TTTAAATTTGAAGGACCTAAAATTTTTAACAATATTAATTTCATACTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATTTGAAGGACCTAAAATTTTTAACAATATTAATTTCATACTTCC  250

seq1  CAAACACTAACTTTATAATTACTTTATACTTTGAGAAACACTTTTACTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACTAACTTTATAATTACTTTATACTTTGAGAAACACTTTTACTGT  300

seq1  CCTCAATGAGTGACTGATTTCACCCACTTGTCAGTGTCTTCCTTCTTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAATGAGTGACTGATTTCACCCACTTGTCAGTGTCTTCCTTCTTATT  350

seq1  CCCATACAATTTTCAATTTCAGACACCTCCTATTGAAAAAGCCTTCTAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATACAATTTTCAATTTCAGACACCTCCTATTGAAAAAGCCTTCTAAC  400

seq1  AATTTCCTAATTATAAGTATTATGAATGTAAATGAGTAGCTATAGAAAAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCTAATTATAAGTATTATGAATGTAAATGAGTAGCTATAGAAAAT  450

seq1  GGCCTAACTAATATATGCATTAGAGAGAATATACTGTTAAATTATAAAAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTAACTAATATATGCATTAGAGAGAATATACTGTTAAATTATAAAAC  500

seq1  TGAAGATTTTAATGACAGAATAAGGAAATGTTGAAAGGCATAAAATTGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGATTTTAATGACAGAATAAGGAAATGTTGAAAGGCATAAAATTGCA  550

seq1  TAAAAATAAATTAAAATTAAAATCAAGCATATTGTCTCCTCTCTTCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAATAAATTAAAATTAAAATCAAGCATATTGTCTCCTCTCTTCAGAG  600

seq1  AAGAGCAGCTGTTTCTATGCTGTACTTCCTGAAAGAGCTGATGTCTGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAGCAGCTGTTTCTATGCTGTACTTCCTGAAAGAGCTGATGTCTGCAG  650

seq1  TGCGGTCTGGTTCCTCTGTGTATGTATGCATACACAAATTTGTCACATTT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCGGTCTGGTTCCTCTGTGTATGTATGCATACACAAATTTGTCACATTT  700

seq1  ACAACCCATGAATACGCGGAAAACAGCAGGCTGAATTGACATTGTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAACCCATGAATACGCGGAAAACAGCAGGCTGAATTGACATTGTTTTCT  750

seq1  TTCTAAAATATCTCCTTTTGGCACACAATTAAAGATGAAGACTATCCAAT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAAAATATCTCCTTTTGGCACACAATTAAAGATGAAGACTATCCAAT  800

seq1  AAGAAAAACAAATTCTAAAATTATGAAGTTATAATATTTGGAAGTACAAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACAAATTCTAAAATTATGAAGTTATAATATTTGGAAGTACAAA  850

seq1  TTTCTTAAGATGTTTTCCGGCATTCAAACAAATGAGTCAATTTCAGAAAA  900
      ||||||||||||||||||||||||| |||||||||||||||||||| |||
seq2  TTTCTTAAGATGTTTTCCGGCATTC-AACAAATGAGTCAATTTCAG-AAA  898

seq1  ATCTTATTAGGGAGAAAGCAACCCTTTAGAATAAGACATGTGTTAATAAT  950
      ||||||||| ||||||||||||||||||||   ||||||||||| |||||
seq2  ATCTTATTA-GGAGAAAGCAACCCTTTAGA--TAGACATGTGTT-ATAAT  944

seq1  TTGCCCAGGACGACTCTGTTTGCTGCTTGATGCAAATAACTTATAATATG  1000
      |||||||||||||||||| ||||||| |||||| ||||   ||| |||||
seq2  TTGCCCAGGACGACTCTG-TTGCTGC-TGATGC-AATA--CTAT-ATATG  988

seq1  TTGCTACTTCTATAGAGGAAAAACTTACAAAATTCCTCAAATGTGAAACA  1050
       |||||| ||||||||||||||   ||||||  ||||| |||||||||||
seq2  -TGCTAC-TCTATAGAGGAAAA--CTACAAA--TCCTC-AATGTGAAACA  1031

seq1  TCTGTTGTAGGCATCAACATGCTGCTGTTACCAGAAGGACAAATGGACAT  1100
      ||||||||| ||||| |||||||||||||||||||  ||| |||||||||
seq2  TCTGTTGTA-GCATC-ACATGCTGCTGTTACCAGA--GACCAATGGACAT  1077

seq1  G-CACTGTTGGCAAAAGGAAAGGTCCTAATGCTCATCTCA  1139
      | ||||||  || ||||   | ||||| ||||||||||||
seq2  GCCACTGT--GCCAAAG---AAGTCCT-ATGCTCATCTCA  1111

seq1: chr19_14370810_14371952
seq2: B6Ng01-139J08.g_67_1174 (reverse)

seq1  GGTCTTACAAGTGAGTTGGACAGACAGAAAAAGAACTTTACTTTGTAGAA  50
      |||||  |||||||| ||||||||||| ||||||   |||||   | || 
seq2  GGTCT--CAAGTGAG-TGGACAGACAG-AAAAGA--CTTACT---TGGAG  41

seq1  AAGATTATTTTAAAGACTTCATCATCATTTGACAAAGAAAGCACATTTTA  100
      ||||    ||| ||||| |||||||||||    |||| |||||||||   
seq2  AAGA----TTTTAAGACCTCATCATCATT---GAAAG-AAGCACATT---  80

seq1  GGGGAAAGAAAACTGACCTAT-ACAGAGTCAGTTTCAGCCATAGAACCAC  149
       ||||||| |||||||||||| |||||||||| ||||| ||||||  |||
seq2  AGGGAAAG-AAACTGACCTATAACAGAGTCAG-TTCAG-CATAGA--CAC  125

seq1  AGAGAGCTGGGATGGCGGAGAATTCACCACACTGAATGCACTGCACATCT  199
      ||||||||||||||   ||||| ||| ||||||| |||||||||||||||
seq2  AGAGAGCTGGGATG--CGAGAA-TCA-CACACTG-ATGCACTGCACATCT  170

seq1  GCAATGACCACCAAAAGAAAATGACTTTGTTGCTGTTGCTATCATCATCA  249
      ||||||| || ||||  |||||||||||| ||||| ||||||||||||||
seq2  GCAATGA-CAACAAAGAAAAATGACTTTG-TGCTG-TGCTATCATCATCA  217

seq1  TCATCATCATCATTATTATTATTATTAAACCATTCTTAAGAAATACTTCA  299
      |||||||||||| ||||||   ||||||||||||||||||||||||||||
seq2  TCATCATCATCA-TATTAT--ATATTAAACCATTCTTAAGAAATACTTCA  264

seq1  CTTAGGATACACTTCCTACCACATTCAATTCATGGTGATATCAAAAGTTG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGGATACACTTCCTACCACATTCAATTCATGGTGATATCAAAAGTTG  314

seq1  ACAGCTTTTTATAATCTCTAACTTCAAAGATTAATCTGAGGCAAAGAAGG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCTTTTTATAATCTCTAACTTCAAAGATTAATCTGAGGCAAAGAAGG  364

seq1  ATAAATCTTCTTGGAGATCTGTCAACCCCAGTTGGAACTTGGCCTCATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATCTTCTTGGAGATCTGTCAACCCCAGTTGGAACTTGGCCTCATTT  414

seq1  TCTCCCCCACTGCATTATTTCACACAGGCATTCATCAGAGGAAGGCAGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCCCCACTGCATTATTTCACACAGGCATTCATCAGAGGAAGGCAGCC  464

seq1  ATCCTGTTCATTTTGTGAAATACAGTAAACTTATCAAAACCTCCAGTTAG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTTCATTTTGTGAAATACAGTAAACTTATCAAAACCTCCAGTTAG  514

seq1  GTGCTCCTTCTATGTATGTATTCAGCAATACTGATTTCTTCATGTTACTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTCCTTCTATGTATGTATTCAGCAATACTGATTTCTTCATGTTACTT  564

seq1  TATCTATAGCTTTTAAGAACTAATTGTGGTGAAGTGATCTTATTTCGAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTATAGCTTTTAAGAACTAATTGTGGTGAAGTGATCTTATTTCGAAA  614

seq1  TGAATATTCAAGCATACATATGCACTAACTTCAGAAATGGTGAACATGTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATATTCAAGCATACATATGCACTAACTTCAGAAATGGTGAACATGTG  664

seq1  TGTTTAAGTTGAAAATAAGATGCAGGGGAGTCCATGAAAATGCCTTATCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTAAGTTGAAAATAAGATGCAGGGGAGTCCATGAAAATGCCTTATCA  714

seq1  GCCCTTTCAAGGTCCACCTCAAATCTGCTTAACTTTGAAGTCTGGATAGA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCTTTCAAGGTCCACCTCAAATCTGCTTAACTTTGAAGTCTGGATAGA  764

seq1  TGTCCCATTGCTGGGCCCACCAGAAATCCTCCAAGGAGCTGACTTGGGAG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCCCATTGCTGGGCCCACCAGAAATCCTCCAAGGAGCTGACTTGGGAG  814

seq1  ACAATATAAGACACACAGGATGAAGGAATAAGACTGAGCTGTGTGTAACA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATATAAGACACACAGGATGAAGGAATAAGACTGAGCTGTGTGTAACA  864

seq1  CCAGTACCATGACCCCATCTATATAACCTGGCTGCAGTCCCCTTGAACAT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTACCATGACCCCATCTATATAACCTGGCTGCAGTCCCCTTGAACAT  914

seq1  CTAGCAAACAAATATCTCAAAGGGGGAAACGATAACACACAAATCAGGCA  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAACAAATATCTCAAAGGGGGAAACGATAACACACAAATCAGGCA  964

seq1  GTTGCTTATGTGAGCTATAGGAAGGTCTGAATTTGTTAATCATATGAACA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCTTATGTGAGCTATAGGAAGGTCTGAATTTGTTAATCATATGAACA  1014

seq1  TGTGTCGTTTCCTTACATTTCTGTTAGTTTTCCCATTCAAACATGAATTT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCGTTTCCTTACATTTCTGTTAGTTTTCCCATTCAAACATGAATTT  1064

seq1  TTCAATAATTGTCTTTGATGAGACAAAAATATACTCAGGAATTC  1143
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAATTGTCTTTGATGAGACAAAAATATACTCAGGAATTC  1108