BAC Information

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BAC

Clone NameB6Ng01-139N06
Chromosome19 (Build37)
Map Location 29,822,471 - 29,823,189
singlet/doubletsinglet
Overlap genenone
Upstream geneEG627788, Slc1a1, LOC545262, 4430402I18Rik, Ppapdc2, LOC100042006, EG226086, Cdc37l1, LOC672214, Ak3, Rcl1, LOC433238, Jak2, Insl6, Rln1, 5033414D02Rik, Cd274, Pdcd1lg2, C030046E11Rik, D19Wsu12e, Mlana, 9930021J03Rik
Downstream geneRanbp6, Il33, Trpd52l3, Uhrf2, Gldc, EG625917, Mbl2, LOC100042088, LOC668020, EG546723, Dkk1, Prkg1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-139N06.bB6Ng01-139N06.g
ACCDH938712DH938713
length962822
definitionDH938712|Mus musculus domesticus DNA, BAC clone: B6Ng01-139N06, 5' end.DH938713|Mus musculus domesticus DNA, BAC clone: B6Ng01-139N06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctattgatagcacctagactctaactatgtgtcttcgtggaac
atatttttagaataccaactagagactacaagtgaaagaattctctgtct
tatcagtttattttttataactttgcagtgctgggaatgaaatccaggtc
tttatgcatataccaggcatgtgttcaaccataaagctactccatcctca
aacccatgccatttttcagtccctcctattttttcctcagcagaattaat
attcatgtaacactattagccttatatattatttcacttactcataaaca
ttccaaaagtagatggctactgttgtttttatgttatgtatgcaagtgtt
ctgcctgcttttatcaccacacatcacatgagtacctgtgctggaggaag
ccagaagaggtgttagatccactggaactggacttgaagaggattgggag
ctattatgtgggtgctgagaactcaaccctgcacctccatgatagtagca
agtggtcttaactgctgagccatcttccagccccaagattctatagacat
tctttaacattaggaacaggaaggtctatttacttgcccggtgttaaaca
gctaataaatagcaggattcagagaaaaaaaatgtgaaaagataattagg
gtgccattaaataggcctgaaaagaagctggtagagtttaaatgaagagc
tggaagatggctgtgaagaggaacttaaatacaaataaacagtgccatgt
accttttctattgcactggcaggaagaatgtcctcttaagagaggtaagt
gttcatgggctggagagatggctcagcagttaagagcactgactactctt
gcaggggtcttgagttcaattcctagcaaccacatggtgactcacaccat
ctgtaatgggatctgactgtgacatgtactcagacattcaaaataaatct
tttttttttttt
gaattctttttttagttctgaaccccatttttaatgtttttttttatttt
ctgcactctatcttcttaattttttatatatatcggatattcgtctccta
tctgatttaggattgtgcccatatcttcgaggcttttccccactttctcc
tctctaagtttcagtgtctctggttttatgtggagttccttgatccactt
agtcttgagctttgagatgataagaatggatcaattccttttcttctaca
tgctaaccacaaattgaccatttgttgaagatagagtcttctttccactg
gatggttttagctcctttgtcaaagatcaagtgaccataggtgtgtgggt
tcatttctgggtattcaaatctcttccattggtctacctgtctgttgctg
taccagtaccatgcagtttttaatcacaattgctctgtagtacagcttga
ggtcaggcatggtgattccaccagaggttcttttatcattgagaatagtt
tttgctatttgttattacagatgaatttgcaaattgtcctttctaactct
gtggagaattgagttggaattttgatggggattgagttgaatttgtagat
tgcttttggcaagataggcatttttgactatgttaatcctgccaatccat
gagcatagatctttccatcttctgagatcttcttcgatttctttcttcag
agacttcttatcatatagatcttttctcttccttagttagattcacaccc
gaaggtactttatttgttattattgtgaagtattgtgttccccaaatttc
tttctcagccggttatcctttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_29822471_29823189
seq2: B6Ng01-139N06.b_48_766 (reverse)

seq1  TCTTCACAGCCATCTTCCAGCTCTTCATTTAAACTCTACCAGCTTCTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCACAGCCATCTTCCAGCTCTTCATTTAAACTCTACCAGCTTCTTTT  50

seq1  CAGGCCTATTTAATGGCACCCTAATTATCTTTTCACATTTTTTTTCTCTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGCCTATTTAATGGCACCCTAATTATCTTTTCACATTTTTTTTCTCTG  100

seq1  AATCCTGCTATTTATTAGCTGTTTAACACCGGGCAAGTAAATAGACCTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGCTATTTATTAGCTGTTTAACACCGGGCAAGTAAATAGACCTTC  150

seq1  CTGTTCCTAATGTTAAAGAATGTCTATAGAATCTTGGGGCTGGAAGATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTCCTAATGTTAAAGAATGTCTATAGAATCTTGGGGCTGGAAGATGG  200

seq1  CTCAGCAGTTAAGACCACTTGCTACTATCATGGAGGTGCAGGGTTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCAGTTAAGACCACTTGCTACTATCATGGAGGTGCAGGGTTGAGTT  250

seq1  CTCAGCACCCACATAATAGCTCCCAATCCTCTTCAAGTCCAGTTCCAGTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGCACCCACATAATAGCTCCCAATCCTCTTCAAGTCCAGTTCCAGTG  300

seq1  GATCTAACACCTCTTCTGGCTTCCTCCAGCACAGGTACTCATGTGATGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTAACACCTCTTCTGGCTTCCTCCAGCACAGGTACTCATGTGATGTG  350

seq1  TGGTGATAAAAGCAGGCAGAACACTTGCATACATAACATAAAAACAACAG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATAAAAGCAGGCAGAACACTTGCATACATAACATAAAAACAACAG  400

seq1  TAGCCATCTACTTTTGGAATGTTTATGAGTAAGTGAAATAATATATAAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCATCTACTTTTGGAATGTTTATGAGTAAGTGAAATAATATATAAGG  450

seq1  CTAATAGTGTTACATGAATATTAATTCTGCTGAGGAAAAAATAGGAGGGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATAGTGTTACATGAATATTAATTCTGCTGAGGAAAAAATAGGAGGGA  500

seq1  CTGAAAAATGGCATGGGTTTGAGGATGGAGTAGCTTTATGGTTGAACACA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAAATGGCATGGGTTTGAGGATGGAGTAGCTTTATGGTTGAACACA  550

seq1  TGCCTGGTATATGCATAAAGACCTGGATTTCATTCCCAGCACTGCAAAGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGGTATATGCATAAAGACCTGGATTTCATTCCCAGCACTGCAAAGT  600

seq1  TATAAAAAATAAACTGATAAGACAGAGAATTCTTTCACTTGTAGTCTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAAAATAAACTGATAAGACAGAGAATTCTTTCACTTGTAGTCTCTA  650

seq1  GTTGGTATTCTAAAAATATGTTCCACGAAGACACATAGTTAGAGTCTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGTATTCTAAAAATATGTTCCACGAAGACACATAGTTAGAGTCTAGG  700

seq1  TGCTATCAATAGAGAATTC  719
      |||||||||||||||||||
seq2  TGCTATCAATAGAGAATTC  719