BAC Information

Click to search

BAC

Clone NameB6Ng01-140C07
Chromosome19 (Build37)
Map Location 12,683,251 - 12,804,806
singlet/doubletdoublet
Overlap geneEG240549, Glyat, Olfr1442, Olfr1443, Keg1
Upstream geneMs4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik
Downstream geneZfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-140C07.bB6Ng01-140C07.g
ACCDH938951DH938952
length1,0171,052
definitionDH938951|Mus musculus domesticus DNA, BAC clone: B6Ng01-140C07, 5' end.DH938952|Mus musculus domesticus DNA, BAC clone: B6Ng01-140C07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(12,683,251 - 12,684,274)(12,803,735 - 12,804,806)
sequence
gaattcagctcatcatttttgaagcaaagaatgaggtttttggagggtct
gtatttatctctgtcctagatgaacgtggagagcacatggagacccactt
gactcaggaaaggatgctccttgtattgtgttgtttaccaaatacaaatt
gggctatgaggatttctcttcctttctttctttttttcttccttccttcc
ttccttccttccttgcttgcttgcttgcttgctttatttttgacagaaat
agataagaagttactttaaacatacagatgatatgacttaaagagactag
aaacatgagcaattatgaatttgcttattaagacaaagttgtataaagta
ctagcaaagatggcaccatgatcaccctatctccccatctcttagatttg
tctcctttaaatttcaaaataacttgcaggtgtgtgttgtggggagggaa
gactgtgtatgatcgtttcatgattaatctgtgtaacttttgttgggttc
ctctcctcagaggtttgaggccatggggactaaagacgtaacccttttta
tttttttttatattctattttttatttcttttacttattccctttacaat
ctgctcaccatcctctcctggtcacccaatcccacaatctttccctcatc
cccctctcctcttctcctctgaggagaggggtgctccaaggtatctctcc
accctgatacatcaagtctttgaggctaggcacaccctcttctactgagg
gcagacaagcagccccctcccccaaagaaaatatcccacagacaggcaac
agatttattttttttaaaaagatgtatttatttaacatatgtgatacacc
gaatctgtcttcagacacaccagaagcaggcatcagatcccattacagat
ggtgtaagccatcatgtggttgctgggaattgaacttaggacctctggga
gagcagtcagtgctctggctgttgagccttctctccagcttatgcaacag
cttgaatagctaccact
gaattccaaagaatggtgggctgggctccagtgctgcagctcgagccagc
gtggctgctccagaacattctaacagattctaactgcttgtttacctgac
tttcatttacatatttttgtttttgttggtttttttccctcatagcaaga
ataactcaatatcaatattgataactcaatatcaatgagagagaaaaaag
gatgaaaacaagccaaacttctaatacaaaaataattataaccagggcat
taaacactaaacgaatactgttttaatttccaaaagtattagttgttcat
tagatggcagatgttctcttgattttctaattaatgcttaaataaatgtt
taattttcatagtaaataaactgaaaaaataaaattcacaattttgaatt
atatcattgggtactgagatttgactctgttcttcgggttgctttctgga
aaatgcttaaattatataaaatgtaacacccgaaacaaaacaggttatta
gcttattaaataatgtggatgttaaggtagcggctcttagaaaataatat
tttactaataaaaaagcccaagcaaatgttattgaatcttttgtttttga
ctatgccaatagagaatgtcaacaagcatatggctcttgaaagctcagtg
agcttctttggaggaatggctggttataaagccccacgtaaagtaattca
aagtccacacactttagggcaaaagtcaaagttatatgccattctaatgg
ttttattagaccctaataaatcccttaatataattatcaattctcagtat
gaagaagtggttgtagtacatatataaattgctgaacttattccttataa
ttcaaggttaactttgctattcatgcactacacaagcatccaggccagga
attaattatcaagtatatcactcatattctgtctcacattggattgcctg
gtctacaaaaggaatgagttggttaattatgataaaaatgtgtgaaagtt
tgaatttcatgaaaccctgaaataaggcttaaaattgttcactaatctga
ca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12683251_12684274
seq2: B6Ng01-140C07.b_48_1064

seq1  GAATTCAGCTCATCATTTTTGAAGCAAAGAATGAGGTTTTTGGAGGGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGCTCATCATTTTTGAAGCAAAGAATGAGGTTTTTGGAGGGTCT  50

seq1  GTATTTATCTCTGTCCTAGATGAACGTGGAGAGCACATGGAGACCCACTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTTATCTCTGTCCTAGATGAACGTGGAGAGCACATGGAGACCCACTT  100

seq1  GACTCAGGAAAGGATGCTCCTTGTATTGTGTTGTTTACCAAATACAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCAGGAAAGGATGCTCCTTGTATTGTGTTGTTTACCAAATACAAATT  150

seq1  GGGCTATGAGGATTTCTCTTCCTTTCTTTCTTTTTTTCTTCCTTCCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCTATGAGGATTTCTCTTCCTTTCTTTCTTTTTTTCTTCCTTCCTTCC  200

seq1  TTCCTTCCTTCCTTGCTTGCTTGCTTGCTTGCTTTATTTTTGACAGAAAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTGCTTGCTTGCTTGCTTGCTTTATTTTTGACAGAAAT  250

seq1  AGATAAGAAGTTACTTTAAACATACAGATGATATGACTTAAAGAGACTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAAGAAGTTACTTTAAACATACAGATGATATGACTTAAAGAGACTAG  300

seq1  AAACATGAGCAATTATGAATTTGCTTATTAAGACAAAGTTGTATAAAGTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGAGCAATTATGAATTTGCTTATTAAGACAAAGTTGTATAAAGTA  350

seq1  CTAGCAAAGATGGCACCATGATCACCCTATCTCCCCATCTCTTAGATTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAAAGATGGCACCATGATCACCCTATCTCCCCATCTCTTAGATTTG  400

seq1  TCTCCTTTAAATTTCAAAATAACTTGCAGGTGTGTGTTGTGGGGAGGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCCTTTAAATTTCAAAATAACTTGCAGGTGTGTGTTGTGGGGAGGGAA  450

seq1  GACTGTGTATGATCGTTTCATGATTAATCTGTGTAACTTTTGTTGGGTTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTGTGTATGATCGTTTCATGATTAATCTGTGTAACTTTTGTTGGGTTC  500

seq1  CTCTCCTCAGAGGTTTGAGGCCATGGGGACTAAAGACGTAACCCTTTTTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCTCAGAGGTTTGAGGCCATGGGGACTAAAGACGTAACCCTTTTTA  550

seq1  TTTTTTTTTATATTCTATTTTTTATTTCTTTTACTTATTCCCTTTACAAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTATATTCTATTTTTTATTTCTTTTACTTATTCCCTTTACAAT  600

seq1  CTGCTCACCATCCTCTCCTGGTCACCCAATCCCACAATCTTTCCCTCATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCACCATCCTCTCCTGGTCACCCAATCCCACAATCTTTCCCTCATC  650

seq1  CCCCTCTCCTCTTCTCCTCTGAGGAGAGGGGTGCTCCAAGGTATCTCTCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCTCCTCTTCTCCTCTGAGGAGAGGGGTGCTCCAAGGTATCTCTCC  700

seq1  ACCCTGATACATCAAGTCTTTGAGGCTAGGCACACCCTCTTCTACTGAGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTGATACATCAAGTCTTTGAGGCTAGGCACACCCTCTTCTACTGAGG  750

seq1  GCAGACAAGCAGCCCCCTCCCCCAAAGAAAATATCCCACAGACAGGCAAC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAAGCAGCCCCCTCCCCCAAAGAAAATATCCCACAGACAGGCAAC  800

seq1  AGATTTATTTTTTTTAAAAAAGATGTATTTATTTAACATATGTGAATACA  850
      ||||||||||||||| |||||||||||||||||||||||||||| |||||
seq2  AGATTTATTTTTTTT-AAAAAGATGTATTTATTTAACATATGTG-ATACA  848

seq1  CCGAATCTGTCTTCAGACACACCAGAAGCAGGCATCAGATCCCATTACAG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGAATCTGTCTTCAGACACACCAGAAGCAGGCATCAGATCCCATTACAG  898

seq1  ATGGTTGTAAGCCATCATGTGGTTGCTGGGAATTGAACTTAGGACCTCTG  950
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGG-TGTAAGCCATCATGTGGTTGCTGGGAATTGAACTTAGGACCTCTG  947

seq1  GAAGAGCAGTCAGTGCTCTTGACTGTTGAGCCATCTCTCCAGCTCATGCA  1000
      | |||||||||||||||| || |||||||||| ||||||||||| |||||
seq2  GGAGAGCAGTCAGTGCTC-TGGCTGTTGAGCCTTCTCTCCAGCTTATGCA  996

seq1  ACAGCTTTTGAGATAGCTACCACT  1024
      |||||  |||| ||||||||||||
seq2  ACAGC--TTGA-ATAGCTACCACT  1017

seq1: chr19_12803735_12804806
seq2: B6Ng01-140C07.g_66_1117 (reverse)

seq1  TGTCAGA-TAGTGGAAACATTTTTTAAGCCTTTATTTTCAGTGTTTTCAA  49
      ||||||| |||||  ||||  |||||||||||   |||||| ||||   |
seq2  TGTCAGATTAGTG--AACA-ATTTTAAGCCTT--ATTTCAGGGTTT--CA  43

seq1  TGAAATTTCAAACTTTCAACACATTTTTTTATCAATAATTAACCAACTTC  99
      ||||| ||||||||||| |||||  |||||||| ||||||||||||| ||
seq2  TGAAA-TTCAAACTTTC-ACACA--TTTTTATC-ATAATTAACCAAC-TC  87

seq1  ATTTCCTTTTGGTAGGACCCAGGCAATCCAATGTGAGACAGAATATGAGT  149
      | |||||||| ||||   ||||||||||||||||||||||||||||||||
seq2  A-TTCCTTTT-GTAG--ACCAGGCAATCCAATGTGAGACAGAATATGAGT  133

seq1  GATATAACTTGATAATTAATTCCTGGCCTGGATTGCTTGTTGTAGTTGCA  199
      ||||| |||||||||||||||||||||||||| |||||| ||||| ||||
seq2  GATAT-ACTTGATAATTAATTCCTGGCCTGGA-TGCTTG-TGTAG-TGCA  179

seq1  TGAATAGCAAAGTTAACCTTGAATTATAAGGAATAAGTTCAGCAATTTAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATAGCAAAGTTAACCTTGAATTATAAGGAATAAGTTCAGCAATTTAT  229

seq1  ATATGTACTACAACCACTTCTTCATACTGAGAATTGATAATTATATTAAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGTACTACAACCACTTCTTCATACTGAGAATTGATAATTATATTAAG  279

seq1  GGATTTATTAGGGTCTAATAAAACCATTAGAATGGCATATAACTTTGACT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTTATTAGGGTCTAATAAAACCATTAGAATGGCATATAACTTTGACT  329

seq1  TTTGCCCTAAAGTGTGTGGACTTTGAATTACTTTACGTGGGGCTTTATAA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCCCTAAAGTGTGTGGACTTTGAATTACTTTACGTGGGGCTTTATAA  379

seq1  CCAGCCATTCCTCCAAAGAAGCTCACTGAGCTTTCAAGAGCCATATGCTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCATTCCTCCAAAGAAGCTCACTGAGCTTTCAAGAGCCATATGCTT  429

seq1  GTTGACATTCTCTATTGGCATAGTCAAAAACAAAAGATTCAATAACATTT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGACATTCTCTATTGGCATAGTCAAAAACAAAAGATTCAATAACATTT  479

seq1  GCTTGGGCTTTTTTATTAGTAAAATATTATTTTCTAAGAGCCGCTACCTT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGGGCTTTTTTATTAGTAAAATATTATTTTCTAAGAGCCGCTACCTT  529

seq1  AACATCCACATTATTTAATAAGCTAATAACCTGTTTTGTTTCGGGTGTTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATCCACATTATTTAATAAGCTAATAACCTGTTTTGTTTCGGGTGTTA  579

seq1  CATTTTATATAATTTAAGCATTTTCCAGAAAGCAACCCGAAGAACAGAGT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATATAATTTAAGCATTTTCCAGAAAGCAACCCGAAGAACAGAGT  629

seq1  CAAATCTCAGTACCCAATGATATAATTCAAAATTGTGAATTTTATTTTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCTCAGTACCCAATGATATAATTCAAAATTGTGAATTTTATTTTTT  679

seq1  CAGTTTATTTACTATGAAAATTAAACATTTATTTAAGCATTAATTAGAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTTATTTACTATGAAAATTAAACATTTATTTAAGCATTAATTAGAAA  729

seq1  ATCAAGAGAACATCTGCCATCTAATGAACAACTAATACTTTTGGAAATTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGAGAACATCTGCCATCTAATGAACAACTAATACTTTTGGAAATTA  779

seq1  AAACAGTATTCGTTTAGTGTTTAATGCCCTGGTTATAATTATTTTTGTAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAGTATTCGTTTAGTGTTTAATGCCCTGGTTATAATTATTTTTGTAT  829

seq1  TAGAAGTTTGGCTTGTTTTCATCCTTTTTTCTCTCTCATTGATATTGAGT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAAGTTTGGCTTGTTTTCATCCTTTTTTCTCTCTCATTGATATTGAGT  879

seq1  TATCAATATTGATATTGAGTTATTCTTGCTATGAGGGAAAAAAACCAACA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAATATTGATATTGAGTTATTCTTGCTATGAGGGAAAAAAACCAACA  929

seq1  AAAACAAAAATATGTAAATGAAAGTCAGGTAAACAAGCAGTTAGAATCTG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACAAAAATATGTAAATGAAAGTCAGGTAAACAAGCAGTTAGAATCTG  979

seq1  TTAGAATGTTCTGGAGCAGCCACGCTGGCTCGAGCTGCAGCACTGGAGCC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAATGTTCTGGAGCAGCCACGCTGGCTCGAGCTGCAGCACTGGAGCC  1029

seq1  CAGCCCACCATTCTTTGGAATTC  1072
      |||||||||||||||||||||||
seq2  CAGCCCACCATTCTTTGGAATTC  1052