BAC Information

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BAC

Clone NameB6Ng01-142N13
Chromosome19 (Build37)
Map Location 48,403,426 - 48,404,504
singlet/doubletsinglet
Overlap geneSorcs3
Upstream geneSh3pxd2a, Obfc1, Slk, Col17a1, 6330577E15Rik, D19Ertd652e, LOC677174, Gsto1, Gsto2, BC063749, Gm969, LOC670576
Downstream geneLOC100042896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-142N13.bB6Ng01-142N13.g
ACCDH940940DH940941
length7061,076
definitionDH940940|Mus musculus domesticus DNA, BAC clone: B6Ng01-142N13, 5' end.DH940941|Mus musculus domesticus DNA, BAC clone: B6Ng01-142N13, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgagccccatttttaatggggttatttgattt
tctggagtccaccttcttgagttctttatatatattggatattagtcttc
tatctgatttaggatagataaagatcctttcccaatctgttggtggcctt
tttgtcttattgacggtgtcttttgccttacatgaaactcaagaagaacg
aagaccaaagtgtggacactttgccccttcttagaactgggaacaaaaca
cccatggaaggagttacagagacaaagtttggagctgagacaaaaggatg
gaccatccagagactgccatatccagggatccatcccataatcagcttcc
aaacactgacaccattgcatacactagcaagattgtgctgataggaccct
gatatagcagtctctagtgagactaagccggggcctagcaaacacataag
tggatgctcacagtcagctattggacggatcacagggcccccaatggagg
agctagagaaaatacccaaggagctaaagggatctgcaaccctataggtg
gaacaacattatgaactaaccagtaccccggagctcttggctctagctgc
atatgtatcaaaagatggcctagttggccatcactggaaagagaggccca
ttggacttgcaaactttatcagggccaaaaagtgggagtgggtgggtagg
gggggt

gaattcttatttttttttccaattttttattaggtatttatttaatttac
atttccaatgctatcccaaaagtcctccagcccccaactcccatccctgc
tcccctacctacgcactcccacttcttggccctggtgttcccctgtatta
gggcatataaagtttgcaagaccaatgggcctctcttcccaatgatggcc
aactaggctatcttctgctacatatgcagctagagacaggagatctgggg
ttactggttagttcatattgttgttccacctatagggttgcagactcctt
tagctccttgggtactttctctagctcctccattgggggccctgtgttcc
atccaataactgactgttgtcacggaattcttaactccccagctaaaatc
taagccacagagagctcagtgctggcttcatattagagacatagtgtgtg
ggaggaacccatgactgcaagcagtggatatgaccttcctacagagattt
tgaccccgtggattgtttgaaatacttttaagacacttccttgtgggctg
gagagggtggtgaagaggagagccagtgtattaaaagcagagactatact
cggtggagtgtggttcctggattaagaatattagcatctccctggggctc
ggttaaactctaattttggccagaatcaaaatctacaggatgaagaactc
aaaagagcaggttagaccagcagtctactgcttaataagccctccaggtg
agtcttatgcacactgaattcgagaacaactcttatatctcctgaatact
tattagaactaaaaacagttataggcacacagctgtgcccaatcaacact
tgttgattaaagtctctctacattttcatgaagcaagctatttttttcct
ctttgtgagaggatttagtacagagtaccttaaaatagagatttcttttt
tgcagattgatcatgtgtttacaaatatcagaggattttttttttaatgc
tcattcactatgcagacatacttcttactttaaacagttattatggaatt
cactcatcattcattggacaacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_48403426_48404504
seq2: B6Ng01-142N13.g_68_1143

seq1  GAATTCTTATTTTTTTTTCCAATTTTTTATTAGGTATTTATTTAATTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATTTTTTTTTCCAATTTTTTATTAGGTATTTATTTAATTTAC  50

seq1  ATTTCCAATGCTATCCCAAAAGTCCTCCAGCCCCCAACTCCCATCCCTGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCAATGCTATCCCAAAAGTCCTCCAGCCCCCAACTCCCATCCCTGC  100

seq1  TCCCCTACCTACGCACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCCTACCTACGCACTCCCACTTCTTGGCCCTGGTGTTCCCCTGTATTA  150

seq1  GGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTCCCAATGATGGCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATATAAAGTTTGCAAGACCAATGGGCCTCTCTTCCCAATGATGGCC  200

seq1  AACTAGGCTATCTTCTGCTACATATGCAGCTAGAGACAGGAGATCTGGGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAGGCTATCTTCTGCTACATATGCAGCTAGAGACAGGAGATCTGGGG  250

seq1  TTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGACTCCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGGTTAGTTCATATTGTTGTTCCACCTATAGGGTTGCAGACTCCTT  300

seq1  TAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTCCTTGGGTACTTTCTCTAGCTCCTCCATTGGGGGCCCTGTGTTCC  350

seq1  ATCCAATAACTGACTGTTGTCACGGAATTCTTAACTCCCCAGCTAAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATAACTGACTGTTGTCACGGAATTCTTAACTCCCCAGCTAAAATC  400

seq1  TAAGCCACAGAGAGCTCAGTGCTGGCTTCATATTAGAGACATAGTGTGTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGCCACAGAGAGCTCAGTGCTGGCTTCATATTAGAGACATAGTGTGTG  450

seq1  GGAGGAACCCATGACTGCAAGCAGTGGATATGACCTTCCTACAGAGATTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGAACCCATGACTGCAAGCAGTGGATATGACCTTCCTACAGAGATTT  500

seq1  TGACCCCGTGGATTGTTTGAAATACTTTTAAGACACTTCCTTGTGGGCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACCCCGTGGATTGTTTGAAATACTTTTAAGACACTTCCTTGTGGGCTG  550

seq1  GAGAGGGTGGTGAAGAGGAGAGCCAGTGTATTAAAAGCAGAGACTATACT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGGGTGGTGAAGAGGAGAGCCAGTGTATTAAAAGCAGAGACTATACT  600

seq1  CGGTGGAGTGTGGTTCCTGGATTAAGAATATTAGCATCTCCCTGGGGCTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGTGGAGTGTGGTTCCTGGATTAAGAATATTAGCATCTCCCTGGGGCTC  650

seq1  GGTTAAACTCTAATTTTGGCCAGAATCAAAATCTACAGGATGAAGAACTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAACTCTAATTTTGGCCAGAATCAAAATCTACAGGATGAAGAACTC  700

seq1  AAAAGAGCAGGTTAGACCAGCAGTCTACTGCTTAATAAGCCCTCCAGGTG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAGCAGGTTAGACCAGCAGTCTACTGCTTAATAAGCCCTCCAGGTG  750

seq1  AGTCTTATGCACACTGAATTCGAGAACAACTCTTATATCTCCTGAATACT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTATGCACACTGAATTCGAGAACAACTCTTATATCTCCTGAATACT  800

seq1  TATTAGAACTAAAAACAGTTATAGGCACACAGCTGTGCCCAATCAACACT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAGAACTAAAAACAGTTATAGGCACACAGCTGTGCCCAATCAACACT  850

seq1  TGTTGATTAAAGTCTCTCTACATTTTCATGAAGCAAGCTA-TTTTTTCCT  899
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TGTTGATTAAAGTCTCTCTACATTTTCATGAAGCAAGCTATTTTTTTCCT  900

seq1  CTTTGTGAGAGGATTTAGTACAGAGTACCTTAAAATAGAGATTTCTTTTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGAGAGGATTTAGTACAGAGTACCTTAAAATAGAGATTTCTTTTT  950

seq1  TGCAGATTGAATCATGTGGTTTACAAATATTCAGA-GATTTTTTTTTTAA  998
      ||||||||| ||||||| ||||||||||| ||||| ||||||||||||||
seq2  TGCAGATTG-ATCATGT-GTTTACAAATA-TCAGAGGATTTTTTTTTTAA  997

seq1  TGCTCATTCAACTATGCAGGAACATACCTTCTACTTTAAACAAGTTATAA  1048
      ||||||||| |||||||||  |||||| |  |||||||||| |||||| |
seq2  TGCTCATTC-ACTATGCAG--ACATACTTCTTACTTTAAAC-AGTTATTA  1043

seq1  TGGAATTCACTCATTCATTCATTG---AACACAC  1079
      ||||||||||||| ||||||||||   |||||||
seq2  TGGAATTCACTCA-TCATTCATTGGACAACACAC  1076


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