BAC Information

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BAC

Clone NameB6Ng01-153M01
Chromosome19 (Build37)
Map Location 20,868,310 - 20,869,439
singlet/doubletsinglet
Overlap geneTmc1
Upstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7
Downstream geneLOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda, LOC100041633, 1110059E24Rik, 5730446C15Rik, Tmem2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-153M01.bB6Ng01-153M01.g
ACCDH948975DH948976
length1,119903
definitionDH948975|Mus musculus domesticus DNA, BAC clone: B6Ng01-153M01, 5' end.DH948976|Mus musculus domesticus DNA, BAC clone: B6Ng01-153M01, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctgtttcgatttttgttccactggctctggacctcagcagtatat
gcttgctctggaagaaacaagtcagacactccccatttcacctgccagcc
cctcttaaggagaaagtctgcgattgcctctgctttaggccaagggcaag
aagcatgaaactatctcgagggaagctgtgtttacaatgctgatgttgtg
ttggactggcttaaaagtgaaaggaacaaaaattagggctgaaactccaa
ttagattgttatgaacaagcttgatgctaaccccgttattgtgaccattc
ctgttggtcattgtcatggctatagtcacagaaagaggtgagagcaaggt
ccatcttcatttttataaattaacaaagtagcttataggcccagcatgct
cgttcctaaatgagacacatactatcatggtaaaatgggtcacaggtaca
ctcattttaataaatccaatgtccgcagctttataccctcacactttcca
gatgggagagagaataactcaggactaattcaacagtaacaaagattact
gttgcacatcatagaaccttattatgaatctgagacttggtctttgcgtt
acacctgttagaagcatcaatcaccaggtggcccttgaattgattttctt
ctccacaatttcttgagcatgtagtgccagagagcatgttaataaggatc
ctgttgcctttggttcacaagtctttttagtagtatagatggaattttgt
ctaacacagagacaaacaacaaaaaggcaacctttgctactctatttgta
atttatcaggagacttgtttttaaacaaaagggcaacactattagaactc
cactccctaaagctgcattaatctactccaggaatttacattgtttcagt
gtcctgtagtgactaaattttacctcaataaacttaagaagtagctgtac
tggttacatgttattaacagtggatgctccgcttccaatgaaaagttgat
cagtgcaacaagactcctttttcccctctggcttcagttatttctgatca
atgggactaggaaagtcaccttgtaggaatgatcacagctgtaagaaacg
ttgtacacttgtacacagc
gaattctttgttcagctctgagctccattttttaatggggttatttgatt
ttctggagtccaccttcttgagttctttatatatgttggatattagtccc
ctagtactttgagctttagtaaagtttcttttatgaatgtgaataccctt
gcatttagagcatagatgttcataattgagacttcatcttggtagatttt
tttctttgatgattatgaagtgtcctttttttgatagcttttgattgaaa
gtcaattcattttgatattaggatgactactccggcttgggaccacttgc
ttgggaaaaatttttttttctagccttttactctgaggtgtctgtctgtc
attaaagggcacttcctgtatggagcaaaatgctgggtactgtttacatc
cagtctgttagtctatgactttttattggggaattgagtccattgatatt
aagagacgttaaggaatagtgattgttgcttcctgttatttttgttgtta
aaggtgcaattatatttgtatggctatcttcttttgggtttgttgaaaga
ttagtttcttgctttgtcttgtgtgaagtttcacttcttgtgtttgcaat
tttccatctattatcctttgttagcctggatttgtggaaagatattgtgt
aaattttgttttgtcatggaatagtttgtttttctctgtctatgggtaat
tgagggttttgctgggtatagtagtctgggctggcatttatgtttctctt
tagggtttgtatgacatctgtccaggatcttcttagctttcatagtctct
ggtgagaagacttcatgtaatttctgataggcctgcctttatgtgtttcc
tgaccatttatattcttctttgttttgtgcatttgggggtttgatattat
gtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20868310_20869439
seq2: B6Ng01-153M01.b_43_1161 (reverse)

seq1  GCTGTGTTACAGTGT-CAACAGTTTCTTAACAGCCTTGGATCATTCCTAA  49
      |||||||   ||||| |||| ||||||| |||| ||  ||||||||||| 
seq2  GCTGTGTACAAGTGTACAAC-GTTTCTT-ACAG-CTGTGATCATTCCTAC  47

seq1  CAAGTGACTTTTCCTAGTCCCATTGATTCCAGAAATAACTGAAGCCAGAG  99
       | ||||| ||||||||||||||||||  |||||||||||||||||||||
seq2  AAGGTGAC-TTTCCTAGTCCCATTGAT--CAGAAATAACTGAAGCCAGAG  94

seq1  GGGAAAAAGGAGTCTTTGTTGCACTGATCAACCTTTTCATTTGGAAGCGG  149
      |||||||||||||| |||||||||||||||| ||||||| ||||||||||
seq2  GGGAAAAAGGAGTC-TTGTTGCACTGATCAA-CTTTTCA-TTGGAAGCGG  141

seq1  AGCATCCACCTGTTAATAACAATGTAACCAGTACAGCTACTTCTTAAGTT  199
      |||||||| ||||||||||| |||||||||||||||||||||||||||||
seq2  AGCATCCA-CTGTTAATAAC-ATGTAACCAGTACAGCTACTTCTTAAGTT  189

seq1  TATTGAGGTAAAATTTAGTCACTACAGGACACCTGAAACAATGTAAATTC  249
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TATTGAGGTAAAATTTAGTCACTACAGGACA-CTGAAACAATGTAAATTC  238

seq1  CTGGAGTAGATTAATGCAGCTTTAGGGAGTGGAGTTCTAATAGTGTTGCC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGTAGATTAATGCAGCTTTAGGGAGTGGAGTTCTAATAGTGTTGCC  288

seq1  CTTTTGTTTAAAAACAAGTCTCCTGATAAATTACAAATAGAGTAGCAAAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTGTTTAAAAACAAGTCTCCTGATAAATTACAAATAGAGTAGCAAAG  338

seq1  GTTGCCTTTTTGTTGTTTGTCTCTGTGTTAGACAAAATTCCATCTATACT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCCTTTTTGTTGTTTGTCTCTGTGTTAGACAAAATTCCATCTATACT  388

seq1  ACTAAAAAGACTTGTGAACCAAAGGCAACAGGATCCTTATTAACATGCTC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTAAAAAGACTTGTGAACCAAAGGCAACAGGATCCTTATTAACATGCTC  438

seq1  TCTGGCACTACATGCTCAAGAAATTGTGGAGAAGAAAATCAATTCAAGGG  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCACTACATGCTCAAGAAATTGTGGAGAAGAAAATCAATTCAAGGG  488

seq1  CCACCTGGTGATTGATGCTTCTAACAGGTGTAACGCAAAGACCAAGTCTC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGGTGATTGATGCTTCTAACAGGTGTAACGCAAAGACCAAGTCTC  538

seq1  AGATTCATAATAAGGTTCTATGATGTGCAACAGTAATCTTTGTTACTGTT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTCATAATAAGGTTCTATGATGTGCAACAGTAATCTTTGTTACTGTT  588

seq1  GAATTAGTCCTGAGTTATTCTCTCTCCCATCTGGAAAGTGTGAGGGTATA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTAGTCCTGAGTTATTCTCTCTCCCATCTGGAAAGTGTGAGGGTATA  638

seq1  AAGCTGCGGACATTGGATTTATTAAAATGAGTGTACCTGTGACCCATTTT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTGCGGACATTGGATTTATTAAAATGAGTGTACCTGTGACCCATTTT  688

seq1  ACCATGATAGTATGTGTCTCATTTAGGAACGAGCATGCTGGGCCTATAAG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGATAGTATGTGTCTCATTTAGGAACGAGCATGCTGGGCCTATAAG  738

seq1  CTACTTTGTTAATTTATAAAAATGAAGATGGACCTTGCTCTCACCTCTTT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTTTGTTAATTTATAAAAATGAAGATGGACCTTGCTCTCACCTCTTT  788

seq1  CTGTGACTATAGCCATGACAATGACCAACAGGAATGGTCACAATAACGGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGACTATAGCCATGACAATGACCAACAGGAATGGTCACAATAACGGG  838

seq1  GTTAGCATCAAGCTTGTTCATAACAATCTAATTGGAGTTTCAGCCCTAAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCATCAAGCTTGTTCATAACAATCTAATTGGAGTTTCAGCCCTAAT  888

seq1  TTTTGTTCCTTTCACTTTTAAGCCAGTCCAACACAACATCAGCATTGTAA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCTTTCACTTTTAAGCCAGTCCAACACAACATCAGCATTGTAA  938

seq1  ACACAGCTTCCCTCGAGATAGTTTCATGCTTCTTGCCCTTGGCCTAAAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAGCTTCCCTCGAGATAGTTTCATGCTTCTTGCCCTTGGCCTAAAGC  988

seq1  AGAGGCAATCGCAGACTTTCTCCTTAAGAGGGGCTGGCAGGTGAAATGGG  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCAATCGCAGACTTTCTCCTTAAGAGGGGCTGGCAGGTGAAATGGG  1038

seq1  GAGTGTCTGACTTGTTTCTTCCAGAGCAAGCATATACTGCTGAGGTCCAG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTGTCTGACTTGTTTCTTCCAGAGCAAGCATATACTGCTGAGGTCCAG  1088

seq1  AGCCAGTGGAACAAAAATCGAAACAGAATTC  1130
      |||||||||||||||||||||||||||||||
seq2  AGCCAGTGGAACAAAAATCGAAACAGAATTC  1119