BAC Information

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BAC

Clone NameB6Ng01-154D02
Chromosome19 (Build37)
Map Location 15,834,516 - 16,034,121
singlet/doubletdoublet
Overlap genePsat1, LOC100041424, Cep78
Upstream geneEG433225, EG635497, Pomc-ps1, LOC667482
Downstream geneLOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665, Vps13a, Foxb2, A230083H22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D02.bB6Ng01-154D02.g
ACCDH949304DH949305
length7651,088
definitionDH949304|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D02, 5' end.DH949305|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,834,516 - 15,835,278)(16,033,034 - 16,034,121)
sequence
gaattctgtcctctaggtatgatatagctgctgccattttgaaatcaaac
caggtgtgattacatatagatgcacatcatatgaacaggaccattatctt
ccctcatgtaaggagaggcaggcccttaagggtcctctcctcatggatac
ataaactgttaactattgatggggggaaagaggacactctttttggatag
atttattaacatttgaatgtatatacactcaagctcatattctctctctc
tctctttctctcatagatgtagttaaaaactagcaccctttttaatattt
ctgagagttagatttggttgggcatgggggtacacacctttacatcccag
cactcaggatgcagaggcagtagatttctgtgagtttgaggtctacctgc
tctatatagtgagttccaaaacaaccaagactacatagagatgagagaga
gagagagagagagagagagagagagagagagagagaatattgtatttttt
ttaaaaaattttaaaataagttgagcatggtgacacataggccattctca
ttccatccccctccctcctccttcctcccctcccttccatccctttccat
ccccttccccactccccaatgaattcaactccactaccaagggttaagga
agccttgacaaaaatattctctagcacagataacaccacaatagacaaac
atttccctccaagatgaacaattgattttcaacacacacacatacacaca
tgccggggggggggg
gaattccacggttaatacacctatacaagaacagaaggcacttgaagatg
aaactctgcatccgaaacagactgccaccggacaaatgcaggatatccga
gtgagtgggcctctcagaccttggttcaagccctgagcaaggagctcccc
aagtcggagaaaggaatggtggtctatctctagaagagctaagtttgtac
ctgtttccagaagcagcatcgttgtcagtaagaaaatggggctagacatg
atgatgcaaaccttgatcccagtgcctgggaggcagggacaggcaggtct
ctctgagcttgaggctaacctggtctgcatagtgaattccagaccagtca
aaactacatagtgagaccttacctacaaaaaaagaaaaaaaaaaaaaagg
aagttcttttttttttttttttttttttgataatttatacttgaaataag
caatcttcagtgaggaaagaaagagtaaagagataatcagaaattaaatt
tttgtaaactgctattgtatgcagtcagcttacaatgaagggacactaat
gaaggtccaagtactagtgcagagaacgcttgagaccagtaatctggaca
gactagcatgcttacagcctccacttgtggatggaggaggttggctggca
caggaaccctctctccccccccccacccgaatattttttcttctgcccca
ccaagacccaacagccagtctaaagacttgtctgaaggagcttgctggct
tgagagctcagtcatgccacacccttggatacttcacatacacagagagg
ctaggaattaaggtttcttaagaaatagcttagaaatagttttgtttttt
taaatgtggaaattgaagcctatttatagagaacaaaaaatgctaaaaat
atacagcttactttgggcatatatataattttgagttgccaatccctggc
catctatattagaaaatgtattgactatagaatcctctgagtggtgaact
gacttagtagatcacagtccaagcctggaagatgcctgactgtgagaaaa
gctatagcctcttgttaaggattgataagagtcctagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15834516_15835278
seq2: B6Ng01-154D02.b_44_808

seq1  GAATTCTGTCCTCTAGGTATGATATAGCTGCTGCCATTTTGAAATCAAAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCCTCTAGGTATGATATAGCTGCTGCCATTTTGAAATCAAAC  50

seq1  CAGGTGTGATTACATATAGATGCACATCATATGAACAGGACCATTATCTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGTGTGATTACATATAGATGCACATCATATGAACAGGACCATTATCTT  100

seq1  CCCTCATGTAAGGAGAGGCAGGCCCTTAAGGGTCCTCTCCTCATGGATAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTCATGTAAGGAGAGGCAGGCCCTTAAGGGTCCTCTCCTCATGGATAC  150

seq1  ATAAACTGTTAACTATTGATGGGGGGAAAGAGGACACTCTTTTTGGATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTGTTAACTATTGATGGGGGGAAAGAGGACACTCTTTTTGGATAG  200

seq1  ATTTATTAACATTTGAATGTATATACACTCAAGCTCATATTCTCTCTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATTAACATTTGAATGTATATACACTCAAGCTCATATTCTCTCTCTC  250

seq1  TCTCTTTCTCTCATAGATGTAGTTAAAAACTAGCACCCTTTTTAATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTTTCTCTCATAGATGTAGTTAAAAACTAGCACCCTTTTTAATATTT  300

seq1  CTGAGAGTTAGATTTGGTTGGGCATGGGGGTACACACCTTTACATCCCAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGAGTTAGATTTGGTTGGGCATGGGGGTACACACCTTTACATCCCAG  350

seq1  CACTCAGGATGCAGAGGCAGTAGATTTCTGTGAGTTTGAGGTCTACCTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTCAGGATGCAGAGGCAGTAGATTTCTGTGAGTTTGAGGTCTACCTGC  400

seq1  TCTATATAGTGAGTTCCAAAACAACCAAGACTACATAGAGATGAGAGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATATAGTGAGTTCCAAAACAACCAAGACTACATAGAGATGAGAGAGA  450

seq1  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATTGTATTTTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAGAATATTGTATTTTTT  500

seq1  TTAAAAAATTTTAAAATAAGTTGAGCATGGTGACACATAGGCCATTCTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAATTTTAAAATAAGTTGAGCATGGTGACACATAGGCCATTCTCA  550

seq1  TTCCATCCCCCTCCCTCCTCCTTCCTCCCCTCCCTTCCATCCC-TTCCAT  599
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTCCATCCCCCTCCCTCCTCCTTCCTCCCCTCCCTTCCATCCCTTTCCAT  600

seq1  CCCCTTCCCCACTCCCCAATGAATTCAACTCCACTACCAAGGGTTAAGGA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTTCCCCACTCCCCAATGAATTCAACTCCACTACCAAGGGTTAAGGA  650

seq1  AGCCTTGACAAAAATATTCTCTAGCACAGATAACACCACAATAGACAAAC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTGACAAAAATATTCTCTAGCACAGATAACACCACAATAGACAAAC  700

seq1  ATTTCCCTCCAAGATGAACAATTGA-TTTCAACACACACACATACACACA  748
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  ATTTCCCTCCAAGATGAACAATTGATTTTCAACACACACACATACACACA  750

seq1  TGCCGGGGGGGGGGG  763
      |||||||||||||||
seq2  TGCCGGGGGGGGGGG  765

seq1: chr19_16033034_16034121
seq2: B6Ng01-154D02.g_68_1155 (reverse)

seq1  GCTAGGGACTCTATTCAATCCTTTACAAGA-GCTATAGC-TCTCTCAACA  48
      |||| |||||||  ||||||||| |||||| |||||||| | |||| |||
seq2  GCTA-GGACTCTTATCAATCCTTAACAAGAGGCTATAGCTTTTCTC-ACA  48

seq1  GTCAGGCCATCTCTCCAGCCTTGGAACTGTGATCTTACTAAGTCAGTTCA  98
      |||||| ||||| ||||| ||||| ||||||||| |||||||||||||||
seq2  GTCAGG-CATCT-TCCAGGCTTGG-ACTGTGATC-TACTAAGTCAGTTCA  94

seq1  CCACTCAGAGGATTCTATAGTC-ATACATTTTCTAAATTATACGATGCCA  147
      |||||||||||||||||||||| |||||||||||||  |||| |||| | 
seq2  CCACTCAGAGGATTCTATAGTCAATACATTTTCTAA--TATA-GATGGCC  141

seq1  TGTGATTGGCAACTCAAAATTATATATATGCCCAAAGTTAGCTGTATATT  197
       | ||||||||||||||||||||||||||||||||||| |||||||||||
seq2  AGGGATTGGCAACTCAAAATTATATATATGCCCAAAGTAAGCTGTATATT  191

seq1  TTTAGCATTTTTTGTTCTCTATAATTA-GCTTCAATTTTCCACATTAAAA  246
      |||||||||||||||||||||||| || ||||||| |||||||||| |||
seq2  TTTAGCATTTTTTGTTCTCTATAAATAGGCTTCAA-TTTCCACATTTAAA  240

seq1  AAAACAAAACTATTTCTAAGCTATTTC-TAAGAAACC-TAATTCCTAGCC  294
      ||||||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  AAAACAAAACTATTTCTAAGCTATTTCTTAAGAAACCTTAATTCCTAGCC  290

seq1  TCTCTGTGTATGTGAAGTATCCAA-GGTGTGGCATGACTGAGCTCTCAAG  343
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TCTCTGTGTATGTGAAGTATCCAAGGGTGTGGCATGACTGAGCTCTCAAG  340

seq1  CCAGC-AGCTCC-TCAGACAAGTC-TTAGACTGGCTGCTGGGTCTTGGTG  390
      ||||| |||||| ||||||||||| |||||||||||| ||||||||||||
seq2  CCAGCAAGCTCCTTCAGACAAGTCTTTAGACTGGCTGTTGGGTCTTGGTG  390

seq1  GGGCAGAAGAAAAAATATTCGGGTGGGGGGGGGGAGAGAGGGTTCCTGTG  440
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCAGAAGAAAAAATATTCGGGTGGGGGGGGGGAGAGAGGGTTCCTGTG  440

seq1  CCAGCCAACCTCCTCCATCCACAAGTGGAGGCTGTAAGCATGCTAGTCTG  490
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAACCTCCTCCATCCACAAGTGGAGGCTGTAAGCATGCTAGTCTG  490

seq1  TCCAGATTACTGGTCTCAAGCGTTCTCTGCACTAGTACTTGGACCTTCAT  540
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATTACTGGTCTCAAGCGTTCTCTGCACTAGTACTTGGACCTTCAT  540

seq1  TAGTGTCCCTTCATTGTAAGCTGACTGCATACAATAGCAGTTTACAAAAA  590
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGTCCCTTCATTGTAAGCTGACTGCATACAATAGCAGTTTACAAAAA  590

seq1  TTTAATTTCTGATTATCTCTTTACTCTTTCTTTCCTCACTGAAGATTGCT  640
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATTTCTGATTATCTCTTTACTCTTTCTTTCCTCACTGAAGATTGCT  640

seq1  TATTTCAAGTATAAATTATCAAAAAAAAAAAAAAAAAAAAAAGAACTTCC  690
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTCAAGTATAAATTATCAAAAAAAAAAAAAAAAAAAAAAGAACTTCC  690

seq1  TTTTTTTTTTTTTTCTTTTTTTGTAGGTAAGGTCTCACTATGTAGTTTTG  740
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTCTTTTTTTGTAGGTAAGGTCTCACTATGTAGTTTTG  740

seq1  ACTGGTCTGGAATTCACTATGCAGACCAGGTTAGCCTCAAGCTCAGAGAG  790
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTCTGGAATTCACTATGCAGACCAGGTTAGCCTCAAGCTCAGAGAG  790

seq1  ACCTGCCTGTCCCTGCCTCCCAGGCACTGGGATCAAGGTTTGCATCATCA  840
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGCCTGTCCCTGCCTCCCAGGCACTGGGATCAAGGTTTGCATCATCA  840

seq1  TGTCTAGCCCCATTTTCTTACTGACAACGATGCTGCTTCTGGAAACAGGT  890
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAGCCCCATTTTCTTACTGACAACGATGCTGCTTCTGGAAACAGGT  890

seq1  ACAAACTTAGCTCTTCTAGAGATAGACCACCATTCCTTTCTCCGACTTGG  940
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAACTTAGCTCTTCTAGAGATAGACCACCATTCCTTTCTCCGACTTGG  940

seq1  GGAGCTCCTTGCTCAGGGCTTGAACCAAGGTCTGAGAGGCCCACTCACTC  990
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTCCTTGCTCAGGGCTTGAACCAAGGTCTGAGAGGCCCACTCACTC  990

seq1  GGATATCCTGCATTTGTCCGGTGGCAGTCTGTTTCGGATGCAGAGTTTCA  1040
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATCCTGCATTTGTCCGGTGGCAGTCTGTTTCGGATGCAGAGTTTCA  1040

seq1  TCTTCAAGTGCCTTCTGTTCTTGTATAGGTGTATTAACCGTGGAATTC  1088
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCAAGTGCCTTCTGTTCTTGTATAGGTGTATTAACCGTGGAATTC  1088