BAC Information

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BAC

Clone NameB6Ng01-154D03
Chromosome19 (Build37)
Map Location 19,796,748 - 19,797,906
singlet/doubletsinglet
Overlap genenone
Upstream geneTrpm6, Rorb
Downstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik, E030003E18Rik, EG626549, Aldh1a1, Aldh1a7
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-154D03.bB6Ng01-154D03.g
ACCDH949306DH949307
length1,1531,147
definitionDH949306|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D03, 5' end.DH949307|Mus musculus domesticus DNA, BAC clone: B6Ng01-154D03, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcatagttctccagggaaacattttcattataaaaatgactgaaat
tttaataggtgatgcagtaaatttatagtcttaatgagtttattatcaat
tctaagacattttggtagattctttcaaaattttctgtttagatattgtt
atcctgagtcagtgccaattttgtcttattcctttcctgtttgctggctg
ttaaattccatcttcttcctttataaatctggtaaggctttttaggaaga
tcttacctaacacaatcttatacaaagaaaacaattggtccaataaagac
atgtaaaaataagttgaagagatatttctcaaatgacaacacaaatgcct
agcaggtaaatgaacagtgttcaacatcagtaattgttaggaatataaaa
attaaacctacaataagacaccagcattggatagagtgaacatcacaaaa
aggagaatgatagtaattatggatgagaaggtaggcaaaaaagaaagact
tcattattggtggcaatgcaaatgaggaaaagaatatggaaaactgatgg
gttattggaagacaacttgtcatgtaaagagttaacaatacaagcatgaa
taaaaacttaattcccagagctctcttcaaagtcaagcaaacctgcaatc
ccagacttgaaggcaaatactgatggattactggagcttgttggccaatg
agcttatcacatgggtcatcgtggttgagatcggaaagcactgtgttaca
taaaatcataaaatatcacttatatgtggagtctaaagaacaaaggggag
actatgagagaccttcacagaaactgtgcacatgcaagaaggagatgata
ctttgagttgttgttgagatctgttgctatggtaaccttaccagctgagt
gattgcagtgttatgccactggaaaatggatctccactcctctcattaaa
aaaagaggccaggtgtccgaggtgatgaaggaacttgtttgaagtggatt
tgatcatatcatgttgcattaaaaacatcctttacttcacattgtagtca
gcaattgtcttaattgtgatttttcagaggcatgctttttaaaagcattt
atcctttatggccaatagtatgctaataagctactctaatatcctcctct
ttc
gaattctcatattggttccctgaactgtagagtgagggctattatggttg
gaaaggccaaatggaagcctttagagttgcctttgccaaagaaaatagtg
aatcaaaaacagtatcgtattcctggaggcattgcagaaattactgccac
tatcaaggacttgaaagacgcaggggtggtggttcccaccacatctccgt
ttaactctcctatctggccagtgcagaaaacagatggatcatggagaatg
acagttgattatcgaaaactaaatcaggtagtaactccaattgcagctgc
tgtaccagatgtagtttcgttacttgagcaaattaacacatctcctggca
cctggtatgcggctattgatctggcaaatgccttcttctcagtacctgtc
cataaggaccaccagaagcaatttgctttcagttggcaaggccaacagta
taccttcacagttttgcctcaaggatatattaactctcctgccctgtgtc
ataatttagttagaagggatcttgatcgtttggatcttccacaaaatatc
acattggtgcactatattgatgacattatgctgattggaccaagtgagca
ggaagtagcaaccactttggactcattggtaacacatatgcgtaccagag
gatgggaaataaatccaaccaaaattcaaggaccatctacctcagtgaaa
ttcttaggagtccagtggtgtggggcatgcagagatattccttctaaagt
gaaagataagttattgcacctggcccctcctacaaccaagaaagaagcac
aacgtttagtgggtctatttggattctggagacaacacatccctcacttg
ggtgtgttacttaggcctatttaccaagtgactcggaaagctgctagctt
tgtgtgggcctgtacaggagaagcccttcacaggtccaggctgctgtgca
gctgctctacacttggaccatatgaccagcagaccgatgtacttgaggtg
ctgtggctgaaagagatgctgttcgagctctagcagcccctgtaggtgaa
tccaagaaaggcctttggattggaacaagtctaccatcatctgcgaacac
atatctcttgaaaaggccagggcctgctatgggctatatggaaacgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_19796748_19797906
seq2: B6Ng01-154D03.b_48_1200

seq1  GAATTCATAGTTCTCCAGGGAAACATTTTCAATATAAAAATGACTGAAAT  50
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  GAATTCATAGTTCTCCAGGGAAACATTTTCATTATAAAAATGACTGAAAT  50

seq1  TTTAATAGGTGATGCAGTAAATTTATAGTCTTAATGAGTTTATTATCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAATAGGTGATGCAGTAAATTTATAGTCTTAATGAGTTTATTATCAAT  100

seq1  TCTAAGACATTTTGGTAGATTCTTTCAAAATTTTCTGTTTAGATATTGTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAAGACATTTTGGTAGATTCTTTCAAAATTTTCTGTTTAGATATTGTT  150

seq1  ATCCTGAGTCAGTGCCAATTTTGTCTTATTCCTTTCCTGTTTGCTGGCTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGAGTCAGTGCCAATTTTGTCTTATTCCTTTCCTGTTTGCTGGCTG  200

seq1  TTAAATTCCATCTTCTTCCTTTATAAATCTGGTAAGGCTTTTTAGGAAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTCCATCTTCTTCCTTTATAAATCTGGTAAGGCTTTTTAGGAAGA  250

seq1  TCTTACCTAACACAATCTTATACAAAGAAAACAATTGGTCCAATAAAGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTACCTAACACAATCTTATACAAAGAAAACAATTGGTCCAATAAAGAC  300

seq1  ATGTAAAAATAAGTTGAAGAGATATTTCTCAAATGACAACACAAATGCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAAAATAAGTTGAAGAGATATTTCTCAAATGACAACACAAATGCCT  350

seq1  AGCAGGTAAATGAACAGTGTTCAACATCAGTAATTGTTAGGAATATAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTAAATGAACAGTGTTCAACATCAGTAATTGTTAGGAATATAAAA  400

seq1  ATTAAACCTACAATAAGACACCAGCATTGGATAGAGTGAACATCACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAAACCTACAATAAGACACCAGCATTGGATAGAGTGAACATCACAAAA  450

seq1  AGGAGAATGATAGTAATTATGGATGAGAAGGTAGGCAAAAAAGAAAGACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAATGATAGTAATTATGGATGAGAAGGTAGGCAAAAAAGAAAGACT  500

seq1  TCATTATTGGTGGCAATGCAAATGAGGAAAAGAATATGGAAAACTGATGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTATTGGTGGCAATGCAAATGAGGAAAAGAATATGGAAAACTGATGG  550

seq1  GTTATTGGAAGACAACTTGTCATGTAAAGAGTTAACAATACAAGCATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATTGGAAGACAACTTGTCATGTAAAGAGTTAACAATACAAGCATGAA  600

seq1  TAAAAACTTAATTCCCAGAGCTCTCTTCAAAGTCAAGCAAACCTGCAATC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTTAATTCCCAGAGCTCTCTTCAAAGTCAAGCAAACCTGCAATC  650

seq1  CCAGACTTGAAGGCAAATACTGATGGATTACTGGAGCTTGTTGGCCAATG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGACTTGAAGGCAAATACTGATGGATTACTGGAGCTTGTTGGCCAATG  700

seq1  AGCTTATCACATGGGTCATCGTGGTTGAGATCGGAAAGCACTGTGTTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTATCACATGGGTCATCGTGGTTGAGATCGGAAAGCACTGTGTTACA  750

seq1  TAAAATCATAAAATATCACTTATATGTGGAGTCTAAAGAACAAAGGGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATCATAAAATATCACTTATATGTGGAGTCTAAAGAACAAAGGGGAG  800

seq1  ACTATGAGAGACCTTCACAGAAACTGTGCACATGCAAGAAGGAGATGATA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTATGAGAGACCTTCACAGAAACTGTGCACATGCAAGAAGGAGATGATA  850

seq1  CTTTGAGTTGTTGTTGAGATCTGTTTGCTATGGTAACCTTACCAGCTGAG  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  CTTTGAGTTGTTGTTGAGATCTG-TTGCTATGGTAACCTTACCAGCTGAG  899

seq1  TGA-TGCAGTGTTAATGCCACTGGGAAAATGGATCTCCACTCCTCTCATT  949
      ||| ||||||||| |||||||| |||||||||||||||||||||||||||
seq2  TGATTGCAGTGTT-ATGCCACT-GGAAAATGGATCTCCACTCCTCTCATT  947

seq1  AAAAAAAGAGGCCAGGTGTCCGAGGTGATG-AGGAACTTGTTTGAAGT-G  997
      |||||||||||||||||||||||||||||| ||||||||||||||||| |
seq2  AAAAAAAGAGGCCAGGTGTCCGAGGTGATGAAGGAACTTGTTTGAAGTGG  997

seq1  ATTTGATCATATCATGTTGCATTAAAAACATCC-TTACTTCACATTGTAG  1046
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  ATTTGATCATATCATGTTGCATTAAAAACATCCTTTACTTCACATTGTAG  1047

seq1  TCAGCAAATGTCTATAAATGTGATTTTTCAGA-GCATGCTTTTTTAAAAA  1095
      ||||||| ||||| ||| |||||||||||||| |||||||||||  ||||
seq2  TCAGCAATTGTCT-TAATTGTGATTTTTCAGAGGCATGCTTTTT--AAAA  1094

seq1  GCATTTAATCTTTTATGCCAATTAGTTATGCTAATAAGCTTTACTCTAAT  1145
      |||||| ||| |||||| | | ||| |||||||||||||  |||||||||
seq2  GCATTT-ATCCTTTATGGCCAATAG-TATGCTAATAAGC--TACTCTAAT  1140

seq1  ATCCTCTCTCTTTC  1159
      |||||| |||||||
seq2  ATCCTC-CTCTTTC  1153