BAC Information

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BAC

Clone NameB6Ng01-167G05
Chromosome19 (Build37)
Map Location 51,797,305 - 51,918,301
singlet/doubletdoublet
Overlap geneLOC668536
Upstream geneLOC100042924, LOC100042928
Downstream geneLOC100042936, Ins1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167G05.bB6Ng01-167G05.g
ACCDH958902DH958903
length1,218832
definitionDH958902|Mus musculus domesticus DNA, BAC clone: B6Ng01-167G05, 5' end.DH958903|Mus musculus domesticus DNA, BAC clone: B6Ng01-167G05, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(51,917,061 - 51,918,301)(51,797,305 - 51,798,136)
sequence
gaattcttagaaaactaaaaatagaaccccaccataaatgtcacacttac
agtttcactatatcttacattgaaactattccagttgtttatgtttgtag
ttaaacagttctgatccagttgacattttcctgatgccttaggtggctga
gactctctcttttcctagtaaatcaattgattcttttacctattcctttg
gggacagttttattttagtttctataacaacctcccacccaagcatatta
taaatatcataaagaaacacttttcttgctcttatatctaaattatttta
aggatttaggtcaatttattaaaacagctcaaattgcatttgacttgaac
tgatatgagcaagtatcctgagaacctgcagctaagtcccacacttggcc
tgggccaagtggaaaaacatcactggactgctatttctgtaatctgtttt
tcagctctcttgccaagcaaataaccaaccaataaagatacaaatatatc
taggtttttttttttcttccagtttctggatattatgaataaagccacca
tgaacatagttgcacaagtttccttgtggaatgatggggcataatttggg
gatgtgcccatgatatatctgggtctggaggaagattggttcccaacttt
ctgtagaactgctatctaggtttccatagtggctctagacgtttgtactc
ccactaacaatgggagactgtttcccttggtacacatcacctccagcatg
agctgtcatttctgttagtgagcatagtcttcctgataggggtaaaatgg
aatctcaaagtaattttgatttcatgatcgtgatgattaagaatactgaa
tatttaagtatttctcgccatttgagatttctctattgatagttctctgt
ttagctttgtacccatattttttatttgttactttcttgatatttagttt
tggtgttctttatatgggtttggatataccctctatcaatactgtgttgg
tatattttgccttacaggaggactcagtttcacagggtccattttttatt
tagatcatactgcttcagaagactcttacacattttttgtcatcaatgtt
caattgtacgaaattactactatcttctggatctgatgtctttataactc
agcacctttattttggacctttcgtttacggaccatgattagtttttctg
tttagggaaagtttcctc
gaattccaaagcagattacataaaacaattctttacatgtttgcttttta
tttattcattttaaggtgttgagaggtttttcttttttctttttttcttt
ctcctttgtcatcttccctaagctattgacatttaacatgcacacaggag
aaagcagagctggtgatttctatattcagttcttaaaaactccaaagtca
agaaagaaaacctgaaagtctgctgagagctgctgtggttacagtagtga
tcacagagattggctagcagggaatctaagcacagcaggacaagggaggc
ctggattgtgttggaagatgagaacaaaggtgaaaggaagacaaagatct
ctgaaacaggcacattcacttacttgtgagtccaaggaaaaaagtaaata
caatttgtaaaatgtgtctacaagtaaccatacatagtatgtagaactct
tacaaaattcagatgctctgttgtttgttcagtgtataatggtcagctct
gaaactatatacacacaagcaacaataattgacttatcaggatatattca
taattatatatataccctgaaccctaaccctaatccatatatatatataa
ttatgaatatgaccatatatatatatatatatatatatgtcacattgaga
cttgaggagaatggtacggaagagagtttagtaagtatacgtgagggagg
agaaaggaagcaattatttaatcctgtttcaattaaaaaatattttaaaa
ataaaaatgatttttatatttaaaatccagtatgtatatatatatatata
tatatatatatatatatatatatatgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51917061_51918301
seq2: B6Ng01-167G05.b_47_1264 (reverse)

seq1  GAGGAAACCTTCACTAAACAGAAAAACCTTCACTACT-AT-GTCTGATAA  48
      |||||||| ||| ||||||||||||      |||| | || ||| | |||
seq2  GAGGAAACTTTCCCTAAACAGAAAA------ACTAATCATGGTCCG-TAA  43

seq1  GTGAAAGATGTCAAAAACTAAAAGTTTGCTGAGTTATAAAAAGACATCAG  98
        |||||  ||| |||| |||| |  |||||||||||  |||||||||||
seq2  ACGAAAG--GTCCAAAA-TAAAGG--TGCTGAGTTAT--AAAGACATCAG  86

seq1  ATTCCAGAAGATAAGTAGTAAAATTTCGTACAATTTGGAACATTTTGATG  148
      | |||||||||| ||||||  ||||||||||||||  |||||  ||||||
seq2  A-TCCAGAAGAT-AGTAGT--AATTTCGTACAATT--GAACA--TTGATG  128

seq1  AC-AAAAATGTGTAAGAGTCTTCTGAAGGCAGTATGATCTAAAATTAAAA  197
      || |||||||||||||||||||||||| |||||||||||||||  |||||
seq2  ACAAAAAATGTGTAAGAGTCTTCTGAA-GCAGTATGATCTAAA--TAAAA  175

seq1  AATGGGACCCTGTGAAACTGAGT-CTTCTGTAAGGCAAAATATACCAACA  246
      ||| ||||||||||||||||||| || |||||||||||||||||||||||
seq2  AAT-GGACCCTGTGAAACTGAGTCCTCCTGTAAGGCAAAATATACCAACA  224

seq1  CAGTATTTGATAGAGGGGTAATATCCAAA-CCATATAAAGAACA-CAAAA  294
      ||||| |||||||||||   ||||||||| |||||||||||||| |||||
seq2  CAGTA-TTGATAGAGGG--TATATCCAAACCCATATAAAGAACACCAAAA  271

seq1  CTAAATATCAAGAAAGTAACAAATAAAAAATATGGGTACAAAGCTAAACA  344
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAATATCAAGAAAGTAACAAATAAAAAATATGGGTACAAAGCTAAACA  321

seq1  GAGAACTATCAATAGAGAAATCTCAAATGGCGAGAAATACTTAAATATTC  394
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAACTATCAATAGAGAAATCTCAAATGGCGAGAAATACTTAAATATTC  371

seq1  AGTATTCTTAATCATCACGATCATGAAATCAAAATTACTTTGAGATTCCA  444
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTCTTAATCATCACGATCATGAAATCAAAATTACTTTGAGATTCCA  421

seq1  TTTTACCCCTATCAGGAAGACTATGCTCACTAACAGAAATGACAGCTCAT  494
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTACCCCTATCAGGAAGACTATGCTCACTAACAGAAATGACAGCTCAT  471

seq1  GCTGGAGGTGATGTGTACCAAGGGAAACAGTCTCCCATTGTTAGTGGGAG  544
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGGTGATGTGTACCAAGGGAAACAGTCTCCCATTGTTAGTGGGAG  521

seq1  TACAAACGTCTAGAGCCACTATGGAAACCTAGATAGCAGTTCTACAGAAA  594
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAACGTCTAGAGCCACTATGGAAACCTAGATAGCAGTTCTACAGAAA  571

seq1  GTTGGGAACCAATCTTCCTCCAGACCCAGATATATCATGGGCACATCCCC  644
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGGGAACCAATCTTCCTCCAGACCCAGATATATCATGGGCACATCCCC  621

seq1  AAATTATGCCCCATCATTCCACAAGGAAACTTGTGCAACTATGTTCATGG  694
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATGCCCCATCATTCCACAAGGAAACTTGTGCAACTATGTTCATGG  671

seq1  TGGCTTTATTCATAATATCCAGAAACTGGAAGAAAAAAAAAAACCTAGAT  744
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTTATTCATAATATCCAGAAACTGGAAGAAAAAAAAAAACCTAGAT  721

seq1  ATATTTGTATCTTTATTGGTTGGTTATTTGCTTGGCAAGAGAGCTGAAAA  794
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTGTATCTTTATTGGTTGGTTATTTGCTTGGCAAGAGAGCTGAAAA  771

seq1  ACAGATTACAGAAATAGCAGTCCAGTGATGTTTTTCCACTTGGCCCAGGC  844
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGATTACAGAAATAGCAGTCCAGTGATGTTTTTCCACTTGGCCCAGGC  821

seq1  CAAGTGTGGGACTTAGCTGCAGGTTCTCAGGATACTTGCTCATATCAGTT  894
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGTGGGACTTAGCTGCAGGTTCTCAGGATACTTGCTCATATCAGTT  871

seq1  CAAGTCAAATGCAATTTGAGCTGTTTTAATAAATTGACCTAAATCCTTAA  944
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTCAAATGCAATTTGAGCTGTTTTAATAAATTGACCTAAATCCTTAA  921

seq1  AATAATTTAGATATAAGAGCAAGAAAAGTGTTTCTTTATGATATTTATAA  994
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATTTAGATATAAGAGCAAGAAAAGTGTTTCTTTATGATATTTATAA  971

seq1  TATGCTTGGGTGGGAGGTTGTTATAGAAACTAAAATAAAACTGTCCCCAA  1044
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGGGTGGGAGGTTGTTATAGAAACTAAAATAAAACTGTCCCCAA  1021

seq1  AGGAATAGGTAAAAGAATCAATTGATTTACTAGGAAAAGAGAGAGTCTCA  1094
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATAGGTAAAAGAATCAATTGATTTACTAGGAAAAGAGAGAGTCTCA  1071

seq1  GCCACCTAAGGCATCAGGAAAATGTCAACTGGATCAGAACTGTTTAACTA  1144
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCACCTAAGGCATCAGGAAAATGTCAACTGGATCAGAACTGTTTAACTA  1121

seq1  CAAACATAAACAACTGGAATAGTTTCAATGTAAGATATAGTGAAACTGTA  1194
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATAAACAACTGGAATAGTTTCAATGTAAGATATAGTGAAACTGTA  1171

seq1  AGTGTGACATTTATGGTGGGGTTCTATTTTTAGTTTTCTAAGAATTC  1241
      |||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTGACATTTATGGTGGGGTTCTATTTTTAGTTTTCTAAGAATTC  1218

seq1: chr19_51797305_51798136
seq2: B6Ng01-167G05.g_69_900

seq1  GAATTCCAAAGCAGATTACATAAAACAATTCTTTACATGTTTGCTTTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGCAGATTACATAAAACAATTCTTTACATGTTTGCTTTTTA  50

seq1  TTTATTCATTTTAAGGTGTTGAGAGGTTTTTCTTTTTTCTTTTTTTCTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCATTTTAAGGTGTTGAGAGGTTTTTCTTTTTTCTTTTTTTCTTT  100

seq1  CTCCTTTGTCATCTTCCCTAAGCTATTGACATTTAACATGCACACAGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTTTGTCATCTTCCCTAAGCTATTGACATTTAACATGCACACAGGAG  150

seq1  AAAGCAGAGCTGGTGATTTCTATATTCAGTTCTTAAAAACTCCAAAGTCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCAGAGCTGGTGATTTCTATATTCAGTTCTTAAAAACTCCAAAGTCA  200

seq1  AGAAAGAAAACCTGAAAGTCTGCTGAGAGCTGCTGTGGTTACAGTAGTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAACCTGAAAGTCTGCTGAGAGCTGCTGTGGTTACAGTAGTGA  250

seq1  TCACAGAGATTGGCTAGCAGGGAATCTAAGCACAGCAGGACAAGGGAGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAGAGATTGGCTAGCAGGGAATCTAAGCACAGCAGGACAAGGGAGGC  300

seq1  CTGGATTGTGTTGGAAGATGAGAACAAAGGTGAAAGGAAGACAAAGATCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATTGTGTTGGAAGATGAGAACAAAGGTGAAAGGAAGACAAAGATCT  350

seq1  CTGAAACAGGCACATTCACTTACTTGTGAGTCCAAGGAAAAAAGTAAATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAACAGGCACATTCACTTACTTGTGAGTCCAAGGAAAAAAGTAAATA  400

seq1  CAATTTGTAAAATGTGTCTACAAGTAACCATACATAGTATGTAGAACTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTTGTAAAATGTGTCTACAAGTAACCATACATAGTATGTAGAACTCT  450

seq1  TACAAAATTCAGATGCTCTGTTGTTTGTTCAGTGTATAATGGTCAGCTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAATTCAGATGCTCTGTTGTTTGTTCAGTGTATAATGGTCAGCTCT  500

seq1  GAAACTATATACACACAAGCAACAATAATTGACTTATCAGGATATATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTATATACACACAAGCAACAATAATTGACTTATCAGGATATATTCA  550

seq1  TAATTATATATATACCCTGAACCCTAACCCTAATCCATATATATATATAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATATATATACCCTGAACCCTAACCCTAATCCATATATATATATAA  600

seq1  TTATGAATATGACCATATATATATATATATATATATATGTCACATTGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATGAATATGACCATATATATATATATATATATATATGTCACATTGAGA  650

seq1  CTTGAGGAGAATGGTACGGAAGAGAGTTTAGTAAGTATACGTGAGGGAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGGAGAATGGTACGGAAGAGAGTTTAGTAAGTATACGTGAGGGAGG  700

seq1  AGAAAGGAAGCAATTATTTAATCCTGTTTCAATTAAAAAATATTTTAAAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGGAAGCAATTATTTAATCCTGTTTCAATTAAAAAATATTTTAAAA  750

seq1  ATAAAAATGATTTTTATATTTAAAATCCAGTATGTATATATATATATATA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAATGATTTTTATATTTAAAATCCAGTATGTATATATATATATATA  800

seq1  TATATATATATATATATATATATATGTGTGTG  832
      ||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATGTGTGTG  832