BAC Information

Click to search

BAC

Clone NameB6Ng01-167M12
Chromosome19 (Build37)
Map Location 13,443,051 - 13,444,225
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467
Downstream geneOlfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-167M12.bB6Ng01-167M12.g
ACCDH959187DH959188
length1,1791,230
definitionDH959187|Mus musculus domesticus DNA, BAC clone: B6Ng01-167M12, 5' end.DH959188|Mus musculus domesticus DNA, BAC clone: B6Ng01-167M12, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctctgctgtgaattcttcatagcttctttatatttgctttccatt
atgagaaattagaacaaaagattaccaataaggaaagtgtcatcacctaa
cccattgaaaacttgatttaggacctgtaaacctctaaaccaaagaaata
aatgtatgatatctacatgtgatattctcaaaatgccttttcattggaaa
tatcaaccgttacactataagtgatactcaagaaaacattttctcacatt
agacagcataacatgcctgcctatttctgatcttctctgtgagagtgaaa
atgaaataaggcatttgattgacattttaacatgtggataaatgacatga
atattttgaagttagtctggaaggaaaatttaactcttctggcaatgctg
gtgaggctgcagaatcctgtccaattctacaagtggctgatgtgaaaacc
aaagcgatctcgcgagttagcacagaatgtttttaggttaaacttccatt
tgagcattctgggctacttagaaaacttggtgtacataatggagtgcctg
tcatctaatcattcagaacccagactaaaacattatgtgtatctctataa
acaaaagagacttttgtaacagttcatcttatcatcattgtactaaaaag
cttcctttgaaatctgcctgtggattttagactacactgaacagtcagtt
ttcttgtgtaattactgaggtccaatccctcaaattaggacttgccaatc
tccaaaacttaatagcatatattatttaaataaaatatttaaaatgttgt
aattgtgtttcattgaagttcaaatgttttctaaatgtttatagtctata
ttgaaatacatttttagatgttgaaacttccatacatttatccagtgaaa
tttaatcatactcacttccacacctccctccacatccccaagctttaccc
aatgtgttttctatcataactcatatccttttctaataaatattgtaatt
aacatctaatacaattccttattttcacccctctaattgcttgcgtagca
tcactcacctttttgatggtgctttttataatccccccccaccatcatca
tcgttgccgttgttgtgctgtcatgctactatttacatatatgtaaaatg
gtggtttgtgtggtgtatggtcggtgtgt
gaattctgctttaaaaaccatcagatcttaggctttttaaaatgggtttg
agacttttaatgattgcttctatttctttcagggatatcaggttatttaa
tagttttcctaatcttggtttaacttggtaagttgtgtctctatagaaac
ttatccagtttattaaaattttccattattgtggagtacagccttttgaa
gtaatacctaatgattctttttttttcttaatttttatgatttgagagca
caggtctctaagttcaaccaattttcttttttttttttttcattttttat
taggtatttagctcatttacatttccaatgcttatgtctctctcttcatt
tcttattttatttatttggatattatctctctctcttttcattagtttgg
caaagggtttgtctaccatattgattttctcaaagaaccagctcttggtt
ttgctaactcttttgaatttttttttgttcataactgtttgatttcagcc
attattttgattatttcctgccttctactcctctttgcttctttatttca
aagctttcaagtgtactattaaatttctggtatgagaatattatagtttc
tttatggatgctcttagtattgtgaaatttccttttaacaatgctttcat
gtgtcccataaatttggggatgttttgtcttcattttcattgaattctag
aaaatatgcaatttctttttttatttcttccatgacccagatatcattga
gtagatagttgatcaattcccatgattatgtagactttctagtgtgtctg
ttgttgaagtccagcattaatcatggcagtctgataaggtacaagccttc
atttcaatttatttgtatttgttgatgcttgctttgtgacatatcaagaa
tccatggagttctgtgaagaatatataatctctggttgggggcaatgttc
tatagatactgtttggtacatttgatcatggagtctctagttggtatctc
cctgattgttttggtctagatgtccttcaatggcaggagtagaggggatg
cggtcttgccacattatggatgggggtggtggtcgattaggctttagcaa
tattcttacattggaggcacttgtatggcgatgattaggattggaaccat
tcggtttttctgtaaggaataagatcctcaacggtcttggcacaatgggg
tgaaaatctcctaaggtgagtgtagaagtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13443051_13444225
seq2: B6Ng01-167M12.b_45_1223 (reverse)

seq1  ACACA-----CACACA-CACACAAA-CACACATTTACATATATGTAAAAT  43
      |||||     || ||| |||||||| |||   ||||||||||||||||  
seq2  ACACACCGACCATACACCACACAAACCACCATTTTACATATATGTAAA--  48

seq1  AAGTAGCAATGACAGCAACAACAACGGCAACGATGATGATGGT-GGTGGT  92
       |||||| |||||||| |||||||||||||||||||||||||| || || 
seq2  TAGTAGC-ATGACAGC-ACAACAACGGCAACGATGATGATGGTGGGGGGG  96

seq1  GATTATAAAAAGCACCATCAAAAAGGTGAGTGATGCTACGCAAGCAATTA  142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTATAAAAAGCACCATCAAAAAGGTGAGTGATGCTACGCAAGCAATTA  146

seq1  GA-GGGTGAAAATAAGGAATTGTATTAGATGTTAATTACAATATTTATTA  191
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGGTGAAAATAAGGAATTGTATTAGATGTTAATTACAATATTTATTA  196

seq1  GAAAAGGATATGAGTTATGATAGAAAACACATTGGGTAAAGCTTGGGGAT  241
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGGATATGAGTTATGATAGAAAACACATTGGGTAAAGCTTGGGGAT  246

seq1  GTTGGAGGGAGGTGTGGAAGTGAGTATGATTAAATTTCACTGGATAAATG  291
      | ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  G-TGGAGGGAGGTGTGGAAGTGAGTATGATTAAATTTCACTGGATAAATG  295

seq1  TATGGAAGTTTCAACATCTAAAAATGTATTTCAATATAGACTATAAACAT  341
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGAAGTTTCAACATCTAAAAATGTATTTCAATATAGACTATAAACAT  345

seq1  TTAGAAAACATTTGAACTTCAATGAAACACAATTACAACATTTTAAATAT  391
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGAAAACATTTGAACTTCAATGAAACACAATTACAACATTTTAAATAT  395

seq1  TTTATTTAAATAATATATGCTATTAAGTTTTGGAGATTGGCAAGTCCTAA  441
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTAAATAATATATGCTATTAAGTTTTGGAGATTGGCAAGTCCTAA  445

seq1  TTTGAGGGATTGGACCTCAGTAATTACACAAGAAAACTGACTGTTCAGTG  491
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGGGATTGGACCTCAGTAATTACACAAGAAAACTGACTGTTCAGTG  495

seq1  TAGTCTAAAATCCACAGGCAGATTTCAAAGGAAGCTTTTTAGTACAATGA  541
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTCTAAAATCCACAGGCAGATTTCAAAGGAAGCTTTTTAGTACAATGA  545

seq1  TGATAAGATGAACTGTTACAAAAGTCTCTTTTGTTTATAGAGATACACAT  591
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATAAGATGAACTGTTACAAAAGTCTCTTTTGTTTATAGAGATACACAT  595

seq1  AATGTTTTAGTCTGGGTTCTGAATGATTAGATGACAGGCACTCCATTATG  641
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTTTTAGTCTGGGTTCTGAATGATTAGATGACAGGCACTCCATTATG  645

seq1  TACACCAAGTTTTCTAAGTAGCCCAGAATGCTCAAATGGAAGTTTAACCT  691
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACCAAGTTTTCTAAGTAGCCCAGAATGCTCAAATGGAAGTTTAACCT  695

seq1  AAAAACATTCTGTGCTAACTCGCGAGATCGCTTTGGTTTTCACATCAGCC  741
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACATTCTGTGCTAACTCGCGAGATCGCTTTGGTTTTCACATCAGCC  745

seq1  ACTTGTAGAATTGGACAGGATTCTGCAGCCTCACCAGCATTGCCAGAAGA  791
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGTAGAATTGGACAGGATTCTGCAGCCTCACCAGCATTGCCAGAAGA  795

seq1  GTTAAATTTTCCTTCCAGACTAACTTCAAAATATTCATGTCATTTATCCA  841
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAAATTTTCCTTCCAGACTAACTTCAAAATATTCATGTCATTTATCCA  845

seq1  CATGTTAAAATGTCAATCAAATGCCTTATTTCATTTTCACTCTCACAGAG  891
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTTAAAATGTCAATCAAATGCCTTATTTCATTTTCACTCTCACAGAG  895

seq1  AAGATCAGAAATAGGCAGGCATGTTATGCTGTCTAATGTGAGAAAATGTT  941
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATCAGAAATAGGCAGGCATGTTATGCTGTCTAATGTGAGAAAATGTT  945

seq1  TTCTTGAGTATCACTTATAGTGTAACGGTTGATATTTCCAATGAAAAGGC  991
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTGAGTATCACTTATAGTGTAACGGTTGATATTTCCAATGAAAAGGC  995

seq1  ATTTTGAGAATATCACATGTAGATATCATACATTTATTTCTTTGGTTTAG  1041
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTGAGAATATCACATGTAGATATCATACATTTATTTCTTTGGTTTAG  1045

seq1  AGGTTTACAGGTCCTAAATCAAGTTTTCAATGGGTTAGGTGATGACACTT  1091
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTACAGGTCCTAAATCAAGTTTTCAATGGGTTAGGTGATGACACTT  1095

seq1  TCCTTATTGGTAATCTTTTGTTCTAATTTCTCATAATGGAAAGCAAATAT  1141
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTGGTAATCTTTTGTTCTAATTTCTCATAATGGAAAGCAAATAT  1145

seq1  ATAGAAGCTATGAAGAATTCACAGCAGAGAATTC  1175
      | ||||||||||||||||||||||||||||||||
seq2  AAAGAAGCTATGAAGAATTCACAGCAGAGAATTC  1179