BAC Information

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BAC

Clone NameB6Ng01-186O09
Chromosome19 (Build37)9 (Build37)
Map Location 49,054,360 - 49,054,901106,651,537 - 106,652,132
singlet/doubletsingletsinglet
Overlap genenone
Upstream geneGm969, LOC670576, Sorcs3, LOC100042896
Downstream geneLOC629448, Siah1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-186O09.bB6Ng01-186O09.g
ACCGA011624GA011625
length913596
definitionB6Ng01-186O09.b B6Ng01-186O09.g
singlet/doubletsingletsinglet
BLAST hituniqueunique
Map location.(49,054,360 - 49,054,901)(106,651,537 - 106,652,132)
sequence
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
ccaaatgctttttctgcatctaacgagatgatcatgtggtttttgtcttt
gagtttgtttatataatggattacattgatggattttcgtatattaaacc
atccctgcatccctggaataaaacctacttggtcaggatggatgattgct
ttaatgtgttcttgattcggttagtgagaattttattgaggatttttgca
tcgatattcataagagaaattggtctgaagttctctatctttgttgggtc
tttctgtggtttaggtatcagagtaatagtggcttcataaaatgagttgg
gtagagtaccttctacttctattttgtgaaatagtttgtgcagaactgga
attagatcttctttgaaggtctgatagaactctgcactaaacccgtctgg
tcctgggctttttttggctgggagactattgataactgcttctatttctt
taggtgatatgggactgtttagatggtcaacttgatcctgattcaacttt
ggtacctggtatctgtccagaaatttgtccatttcatccaggttttccag
ttttgttgagtatagccttttgtagaaggatctgatggtgttttggattt
cttcaggatctgttgttatgtctcccttttcatttctgattttgttaatt
aggattttgtccctgtgccctttagtgagtctagctaagggtttatctat
cttgttgattttctcaagaacaactccctcgtttggttaattcttgaata
gttcttcttgttccacttggttgattcaccctgagtatgatattctcctg
ccgtctactcctcttgggtgaattgcttccttttttctagagcttttaga
tgtgttgtctagc

gaattcaatccctgagatccacgggatcctgtgtgtgtgtgtaaattaat
tcagaattttcaggattttagcatcttcatacctcttgtgtgaccactaa
tcttagatgtaacctgatacagctaggaaagagagaacaacaatggagaa
attccctccattagactggccagtgggcattttcttggttattaattaat
ataagtgggtccagccctaggcaggtaggcctgggctgtataagagagtg
gctgtagtcagcatgcctctgtggtgtctacagcaagcttctgctctgac
ttccctcagtgatgcactgcgacttggaagtggaggtcaaatataccttt
tacttcctgcttggttccttttggtcatggtgtttttcacagcaaaagaa
aagcaaactagaacaccttgcctctcttttccaagactattctgtctctt
gacttgtagctatctcactacaatccagccacaatgggtcactgtttccg
attctaaatcaagtttattcctgaggcctttccctctcccctgatacttc
acatttctttttcttttttttttttttttttttttgttttttgttt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_49054360_49054901
seq2: B6Ng01-186O09.b_425_959 (reverse)

seq1  GCTTGACAACACATCTAAAAGCTCTAGAAAAAAAGGAAGCAAATTCACCC  50
      ||| ||||||||||||||||||||||| |||||||||||| |||||||||
seq2  GCTAGACAACACATCTAAAAGCTCTAG-AAAAAAGGAAGC-AATTCACCC  48

seq1  AAGAGGAGTAGACTGCAGGAAATAATCAAACTCAGGGGTGAAATCAACCA  100
      ||||||||||||| |||||| |  |||| ||||| ||||| |||||||||
seq2  AAGAGGAGTAGACGGCAGGAGAATATCATACTCA-GGGTG-AATCAACCA  96

seq1  AGTGGAAACAAGAAGAACTATTCAAAGAATTAACCAAACGA-GGAGTTGG  149
      ||||| ||||||||||||||||| ||||||||||||||||| |||||| |
seq2  AGTGG-AACAAGAAGAACTATTC-AAGAATTAACCAAACGAGGGAGTT-G  143

seq1  TTCTTTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  199
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTC-TTGAGAAAATCAACAAGATAGATAAACCCTTAGCTAGACTCACTAA  192

seq1  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGCACAGGGACAAAATCCTAATTAACAAAATCAGAAATGAAAAGGGAG  242

seq1  ACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTAC  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAACAACAGATCCTGAAGAAATCCAAAACACCATCAGATCCTTCTAC  292

seq1  AAAAGGTTATACTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATT  349
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTATACTCAACAAAACTGGAAAACCTGGATGAAATGGACAAATT  342

seq1  TCTGGACAGATACCAGGTACCAAAGTTGAGTCAGGATCAAGTTGACCATC  399
      ||||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  TCTGGACAGATACCAGGTACCAAAGTTGAATCAGGATCAAGTTGACCATC  392

seq1  TAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATTAATAGTCTC  449
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  TAAACAGTCCCATATCACCTAAAGAAATAGAAGCAGTTATCAATAGTCTC  442

seq1  CCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGCCAAAAAAAGCCCAGGACCAGACGGGTTTAGTGCAGAGTTCTATCA  492

seq1  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTT  542
      |||||||||||||||||||||||||||||||||||||||||||
seq2  GACCTTCAAAGAAGATCTAATTCCAGTTCTGCACAAACTATTT  535


seq1: chr9_106651537_106652132
seq2: B6Ng01-186O09.g_69_664

seq1  GAATTCAATCCCTGAGATCCACGGGATCCTGTGTGTGTGTGTAAATTAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCCCTGAGATCCACGGGATCCTGTGTGTGTGTGTAAATTAAT  50

seq1  TCAGAATTTTCAGGATTTTAGCATCTTCATACCTCTTGTGTGACCACTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTTTCAGGATTTTAGCATCTTCATACCTCTTGTGTGACCACTAA  100

seq1  TCTTAGATGTAACCTGATACAGCTAGGAAAGAGAGAACAACAATGGAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAGATGTAACCTGATACAGCTAGGAAAGAGAGAACAACAATGGAGAA  150

seq1  ATTCCCTCCATTAGACTGGCCAGTGGGCATTTTCTTGGTTATTAATTAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCCTCCATTAGACTGGCCAGTGGGCATTTTCTTGGTTATTAATTAAT  200

seq1  ATAAGTGGGTCCAGCCCTAGGCAGGTAGGCCTGGGCTGTATAAGAGAGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGGGTCCAGCCCTAGGCAGGTAGGCCTGGGCTGTATAAGAGAGTG  250

seq1  GCTGTAGTCAGCATGCCTCTGTGGTGTCTACAGCAAGCTTCTGCTCTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTAGTCAGCATGCCTCTGTGGTGTCTACAGCAAGCTTCTGCTCTGAC  300

seq1  TTCCCTCAGTGATGCACTGCGACTTGGAAGTGGAGGTCAAATATACCTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTCAGTGATGCACTGCGACTTGGAAGTGGAGGTCAAATATACCTTT  350

seq1  TACTTCCTGCTTGGTTCCTTTTGGTCATGGTGTTTTTCACAGCAAAAGAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCCTGCTTGGTTCCTTTTGGTCATGGTGTTTTTCACAGCAAAAGAA  400

seq1  AAGCAAACTAGAACACCTTGCCTCTCTTTTCCAAGACTATTCTGTCTCTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCAAACTAGAACACCTTGCCTCTCTTTTCCAAGACTATTCTGTCTCTT  450

seq1  GACTTGTAGCTATCTCACTACAATCCAGCCACAATGGGTCACTGTTTCCG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTGTAGCTATCTCACTACAATCCAGCCACAATGGGTCACTGTTTCCG  500

seq1  ATTCTAAATCAAGTTTATTCCTGAGGCCTTTCCCTCTCCCCTGATACTTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTAAATCAAGTTTATTCCTGAGGCCTTTCCCTCTCCCCTGATACTTC  550

seq1  ACATTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTT  596
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTCTTTTTCTTTTTTTTTTTTTTTTTTTTTTGTTTTTTGTTT  596


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