BAC Information

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BAC

Clone NameB6Ng01-188I21
Chromosome19 (Build37)
Map Location 13,779,288 - 13,887,217
singlet/doubletdoublet
Overlap geneOlfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1
Upstream geneKeg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1, Olfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490
Downstream geneOlfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser

no map image available.



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-188I21.bB6Ng01-188I21.g
ACCGA012826GA012827
length1,1721,099
definitionB6Ng01-188I21.b B6Ng01-188I21.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(13,779,288 - 13,780,459)(13,886,113 - 13,887,217)
sequence
gaattcaatcactgttcttcttgcagaagatatgttgactggaaaacttg
tccttaaccaatctgggactcctgagttcgtgttccgtgtcttcaccaat
gctcctgaattccaggctcttctcttcaccctcttcctcctgctgtatct
gatgatcttctgtggcaacactgccatcatctgggtggtgtgcacccaca
cttccttgcacacacccatgtatttcttcctcagtagtctgtctttcctg
gaaatatgctacaccacagatgtggtacccctgatgctttctaacatctt
tgggacccagaagcctatatcgctggctggttgtgggactcaaatgttct
tcttcctcactctgggaggtactgattgctttctcttggcaattatggcc
tatgacaggtatgtggccatctgccaccctctgcactacaacctcatcat
gaccaagaagctgtgtgttcagatggtgatgggctctttaagcttggcac
tgtttctctccctgcagctcactgccttaattttcaccctgcccttctgt
ggacattacctggaaatcaaccactttctttgtgatgtgcctccagtcct
gcgcctagcctgtgctgacattcatgtgcaccaggcagtcctctacgtag
tgggcatcctggtgctgacagtcccattcttgcttatcttcatttcctat
gtgttcattgtttccaccatcctgcgcatgcgctctgcagagggtcgcca
aagggccttttccacctgctcttctcacctcactgtggtcttgctacagt
atggtggctgtagcttggtgtacctgaggccccgctcgagcagctctgat
gatgaggaccggcaaatagccctggtctacacctttgtgactccattact
caaccctctgatttatacccttaggaacaaggatgtcaaagtgctctgag
gaactccatcttctgtaaatcagcatctcactgtagttaaaggcttcagg
tcatagcagaacaatgtgtgggtttggggcactgaaaagaaaagcatatt
atttagccttgttaaatgtccacatttcatttttacttttaggtggaatg
ccactggggatagcctatattcattaccgctcaaatttactgcaaaccgt
aaattgtggagtgagcagatta

gaattcaaagagatgactaacaagctttctgttaattgattctgtgttaa
gcacttgggccatgtaaagctaataaacattgcaatatgttttgtgaatg
cagaaacaaggagaatcaaacatggaaaacagttgatccaagcatagaat
atataaatgacttgtagaattaaaaggaaagttaatttacataataatca
ggactttcacatttacaacttcaattttatgacttgcttcataaaaatta
aaaggattatgtccttatattagcagaagtgtttctattggtgggtataa
ttttgtttaatgactatatcaatagtttgatattttcatatgaaaactca
aaccacacaatgagcaatatagctaaaccaatggcccgaatatacactta
aaaaaactcttggtcagggacattaagatatggataattttttttcatag
aatgttgctgtagaaactcatcacccagaacatttttcttccatgttcat
tcttccacttctgagtgttcatgctttggcttgaaaaagatgtcatttca
gactataaagtgaccttgatggtgaaagaaatacatagataaggtaacca
tttggggtatctgcttctctctaaatgtaggtacttagagattatatact
tcttttttcctactgctctaattttaccctatagattttgatatgttgta
ttttcagtcaatcctaggatattttctaagtttcaatttttgcttcttca
gcaactcttccatcatctaatagtaagttgtttaatcttcataagcttct
ttatactctatgaaattttatgctactgatttatagcttggttacaccat
tgtgattattacacaaaattcaagtaaatatttcactattttcctctgtt
tttcaggcagtctttgggatgtaataggtcatctacttagacaaactcca
tggcccactgagaggaatctgaattctgtagtgacataatgaagtggtat
taatgtctattagttcatttgtatactctgtcatttcatagatattcagt
attagtttttttttttctgtgtgagatgtcattggtttaggcagaattt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13779288_13780459
seq2: B6Ng01-188I21.b_49_1220

seq1  GAATTCAATCACTGTTCTTCTTGCAGAAGATATGTTGACTGGAAAACTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATCACTGTTCTTCTTGCAGAAGATATGTTGACTGGAAAACTTG  50

seq1  TCCTTAACCAATCTGGGACTCCTGAGTTCGTGTTCCGTGTCTTCACCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTAACCAATCTGGGACTCCTGAGTTCGTGTTCCGTGTCTTCACCAAT  100

seq1  GCTCCTGAATTCCAGGCTCTTCTCTTCACCCTCTTCCTCCTGCTGTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCCTGAATTCCAGGCTCTTCTCTTCACCCTCTTCCTCCTGCTGTATCT  150

seq1  GATGATCTTCTGTGGCAACACTGCCATCATCTGGGTGGTGTGCACCCACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATCTTCTGTGGCAACACTGCCATCATCTGGGTGGTGTGCACCCACA  200

seq1  CTTCCTTGCACACACCCATGTATTTCTTCCTCAGTAGTCTGTCTTTCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTTGCACACACCCATGTATTTCTTCCTCAGTAGTCTGTCTTTCCTG  250

seq1  GAAATATGCTACACCACAGATGTGGTACCCCTGATGCTTTCTAACATCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATATGCTACACCACAGATGTGGTACCCCTGATGCTTTCTAACATCTT  300

seq1  TGGGACCCAGAAGCCTATATCGCTGGCTGGTTGTGGGACTCAAATGTTCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGACCCAGAAGCCTATATCGCTGGCTGGTTGTGGGACTCAAATGTTCT  350

seq1  TCTTCCTCACTCTGGGAGGTACTGATTGCTTTCTCTTGGCAATTATGGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCTCACTCTGGGAGGTACTGATTGCTTTCTCTTGGCAATTATGGCC  400

seq1  TATGACAGGTATGTGGCCATCTGCCACCCTCTGCACTACAACCTCATCAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGACAGGTATGTGGCCATCTGCCACCCTCTGCACTACAACCTCATCAT  450

seq1  GACCAAGAAGCTGTGTGTTCAGATGGTGATGGGCTCTTTAAGCTTGGCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAAGAAGCTGTGTGTTCAGATGGTGATGGGCTCTTTAAGCTTGGCAC  500

seq1  TGTTTCTCTCCCTGCAGCTCACTGCCTTAATTTTCACCCTGCCCTTCTGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCTCTCCCTGCAGCTCACTGCCTTAATTTTCACCCTGCCCTTCTGT  550

seq1  GGACATTACCTGGAAATCAACCACTTTCTTTGTGATGTGCCTCCAGTCCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACATTACCTGGAAATCAACCACTTTCTTTGTGATGTGCCTCCAGTCCT  600

seq1  GCGCCTAGCCTGTGCTGACATTCATGTGCACCAGGCAGTCCTCTACGTAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGCCTAGCCTGTGCTGACATTCATGTGCACCAGGCAGTCCTCTACGTAG  650

seq1  TGGGCATCCTGGTGCTGACAGTCCCATTCTTGCTTATCTTCATTTCCTAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCATCCTGGTGCTGACAGTCCCATTCTTGCTTATCTTCATTTCCTAT  700

seq1  GTGTTCATTGTTTCCACCATCCTGCGCATGCGCTCTGCAGAGGGTCGCCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTTCATTGTTTCCACCATCCTGCGCATGCGCTCTGCAGAGGGTCGCCA  750

seq1  AAGGGCCTTTTCCACCTGCTCTTCTCACCTCACTGTGGTCTTGCTACAGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGCCTTTTCCACCTGCTCTTCTCACCTCACTGTGGTCTTGCTACAGT  800

seq1  ATGGTGGCTGTAGCTTGGTGTACCTGAGGCCCCGCTCGAGCAGCTCTGAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGGCTGTAGCTTGGTGTACCTGAGGCCCCGCTCGAGCAGCTCTGAT  850

seq1  GATGAGGACCGGCAAATAGCCCTGGTCTACACCTTTGTGACTCCATTACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAGGACCGGCAAATAGCCCTGGTCTACACCTTTGTGACTCCATTACT  900

seq1  CAACCCTCTGATTTATACCCTTAGGAACAAGGATGTCAAAGGTGCTCTGA  950
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  CAACCCTCTGATTTATACCCTTAGGAACAAGGATGTCAAA-GTGCTCTGA  949

seq1  GGAACTCCATCTTCTGTAAATCAGCATCTCACTGTAGTTAAAGGCTTCAG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTCCATCTTCTGTAAATCAGCATCTCACTGTAGTTAAAGGCTTCAG  999

seq1  GTCATAGCAAGAAACATGTGTGGGTTTGGGGCAACTGAAAAGAAAAAGCA  1050
      |||||||| ||||  ||||||||||||||||| ||||||||| |||||||
seq2  GTCATAGC-AGAACAATGTGTGGGTTTGGGGC-ACTGAAAAG-AAAAGCA  1046

seq1  TATTATTTAGCC-TGTTAAATGT-CACATTTCATTTTTACTTTAAGGT-G  1097
      |||||||||||| |||||||||| ||||||||||||||||||| |||| |
seq2  TATTATTTAGCCTTGTTAAATGTCCACATTTCATTTTTACTTTTAGGTGG  1096

seq1  AATGCCACT-GGGATAG-CTATATTCATTTACG-TCAAA-TTACTGCAAA  1143
      ||||||||| ||||||| |||||||||||  || ||||| ||||||||||
seq2  AATGCCACTGGGGATAGCCTATATTCATTACCGCTCAAATTTACTGCAAA  1146

seq1  ACGTTAAAATGTGGAGTGAGGCAAGATTA  1172
       || |||| |||||||||||   ||||||
seq2  CCG-TAAATTGTGGAGTGAG--CAGATTA  1172


seq1: chr19_13886113_13887217
seq2: B6Ng01-188I21.g_65_1163 (reverse)

seq1  AAATTCTGCCTAAACCAATTGACATCTCAACACAG-AAAAAAAAAACT-A  48
      |||||||||||||||||| ||||||||| |||||| |||||||||||| |
seq2  AAATTCTGCCTAAACCAA-TGACATCTC-ACACAGAAAAAAAAAAACTAA  48

seq1  TACTGAAATATCTTAATGAAATGACAGAGTATAACAAATGAACTTAATAG  98
      ||||| |||||||  ||||||||||||||||| |||||||||| ||||||
seq2  TACTG-AATATCT--ATGAAATGACAGAGTAT-ACAAATGAAC-TAATAG  93

seq1  ACATTTAATACCACTTCATTATGTCACTACAGAATTCAGATTCCTCTCAG  148
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACA-TTAATACCACTTCATTATGTCACTACAGAATTCAGATTCCTCTCAG  142

seq1  TGGGCCATGGAGTTTGTCTAAGTAGATGACCTATTACATCCCAAAGACTG  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCCATGGAGTTTGTCTAAGTAGATGACCTATTACATCCCAAAGACTG  192

seq1  CCTGAAAAACAGAGGAAAATAGTGAAATATTTACTTGAATTTTGTGTAAT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAAAAACAGAGGAAAATAGTGAAATATTTACTTGAATTTTGTGTAAT  242

seq1  AATCACAATGGTGTAACCAAGCTATAAATCAGTAGCATAAAATTTCATAG  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCACAATGGTGTAACCAAGCTATAAATCAGTAGCATAAAATTTCATAG  292

seq1  AGTATAAAGAAGCTTATGAAGATTAAACAACTTACTATTAGATGATGGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATAAAGAAGCTTATGAAGATTAAACAACTTACTATTAGATGATGGAA  342

seq1  GAGTTGCTGAAGAAGCAAAAATTGAAACTTAGAAAATATCCTAGGATTGA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTGCTGAAGAAGCAAAAATTGAAACTTAGAAAATATCCTAGGATTGA  392

seq1  CTGAAAATACAACATATCAAAATCTATAGGGTAAAATTAGAGCAGTAGGA  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAAATACAACATATCAAAATCTATAGGGTAAAATTAGAGCAGTAGGA  442

seq1  AAAAAGAAGTATATAATCTCTAAGTACCTACATTTAGAGAGAAGCAGATA  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGAAGTATATAATCTCTAAGTACCTACATTTAGAGAGAAGCAGATA  492

seq1  CCCCAAATGGTTACCTTATCTATGTATTTCTTTCACCATCAAGGTCACTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAAATGGTTACCTTATCTATGTATTTCTTTCACCATCAAGGTCACTT  542

seq1  TATAGTCTGAAATGACATCTTTTTCAAGCCAAAGCATGAACACTCAGAAG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTCTGAAATGACATCTTTTTCAAGCCAAAGCATGAACACTCAGAAG  592

seq1  TGGAAGAATGAACATGGAAGAAAAATGTTCTGGGTGATGAGTTTCTACAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAATGAACATGGAAGAAAAATGTTCTGGGTGATGAGTTTCTACAG  642

seq1  CAACATTCTATGAAAAAAAATTATCCATATCTTAATGTCCCTGACCAAGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACATTCTATGAAAAAAAATTATCCATATCTTAATGTCCCTGACCAAGA  692

seq1  GTTTTTTTAAGTGTATATTCGGGCCATTGGTTTAGCTATATTGCTCATTG  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTTTTAAGTGTATATTCGGGCCATTGGTTTAGCTATATTGCTCATTG  742

seq1  TGTGGTTTGAGTTTTCATATGAAAATATCAAACTATTGATATAGTCATTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGTTTGAGTTTTCATATGAAAATATCAAACTATTGATATAGTCATTA  792

seq1  AACAAAATTATACCCACCAATAGAAACACTTCTGCTAATATAAGGACATA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAAATTATACCCACCAATAGAAACACTTCTGCTAATATAAGGACATA  842

seq1  ATCCTTTTAATTTTTATGAAGCAAGTCATAAAATTGAAGTTGTAAATGTG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTAATTTTTATGAAGCAAGTCATAAAATTGAAGTTGTAAATGTG  892

seq1  AAAGTCCTGATTATTATGTAAATTAACTTTCCTTTTAATTCTACAAGTCA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTCCTGATTATTATGTAAATTAACTTTCCTTTTAATTCTACAAGTCA  942

seq1  TTTATATATTCTATGCTTGGATCAACTGTTTTCCATGTTTGATTCTCCTT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATATATTCTATGCTTGGATCAACTGTTTTCCATGTTTGATTCTCCTT  992

seq1  GTTTCTGCATTCACAAAACATATTGCAATGTTTATTAGCTTTACATGGCC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCTGCATTCACAAAACATATTGCAATGTTTATTAGCTTTACATGGCC  1042

seq1  CAAGTGCTTAACACAGAATCAATTAACAGAAAGCTTGTTAGTCATCTCTT  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTGCTTAACACAGAATCAATTAACAGAAAGCTTGTTAGTCATCTCTT  1092

seq1  TGAATTC  1105
      |||||||
seq2  TGAATTC  1099


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