BAC Information

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BAC

Clone NameB6Ng01-190K22
Chromosome19 (Build37)
Map Location 17,810,528 - 17,811,534
singlet/doubletsinglet
Overlap genePcsk5
Upstream geneVps13a, Foxb2, A230083H22Rik, Gcnt1, Rfk
Downstream geneEef1a1-ps1, LOC383440, Ostf1, LOC666712, BC016495, LOC100042193, 2410127L17Rik, LOC100042184, D030056L22Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-190K22.bB6Ng01-190K22.g
ACCGA014378GA014379
length1,009832
definitionB6Ng01-190K22.b B6Ng01-190K22.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattaattgttgaatgaataaaatcattaccaatttactttttt
tcttcccatggtttcacaatttgttgctttcctccattttccatcctgct
acacattaaattaatgcctttattgaacagtctgcagtaactcttagttt
tccgtcctgggaggacagaacaagctcagcgctcattagtgtgcgtgccc
agttcaaatgatttgtctgctgcacactccctttcacgctccagaatggt
ctggtctgatcgttacagagctctttaatctttcattttcttagactaag
ctctacaaatggcaatgtttcttgtcctgttttacttcatccttcaattt
aaaaaaaaaatgaaaggcaagtttaccacacactcttctaaagtagcact
ctgaggaacatgattacaggctactactgtgcacaggcctagaagaatta
atttcattccttcaaaacagaatgtatacctccaggttatcaggttactg
gagcagatgctttcactgcccacaatccactgccaacacacggtggagca
ggacacgtctctgtaatgccttctgaccaccattggtcccacagcgacca
tcaaacacggtggcacactggagactcatacagaatgactgctatggaga
agatgcctgggcttcatgaaagccatttttaaatgtttccagagaagact
gggattgatggaagagctcatgcctagcacatgtgaggccctagggtcta
ttccctgtcccagaagagagacagaagtgtttcctgagaggattgtattt
cctcctgctgggcagtatgtccaacttcagtgataactgtttcttcttcg
aattctcctcctcttcctcttctacttcttcttcttcatcatctatttta
ttttccatgatttgttgttgtctctgggaaagcctgttcttttctaataa
gagacagaaagggagtgaatccagaggggaagggatgtgggggagagacc
gggaggagt

gaattctttgtttagctctgaaccccatttatagctgtctcctatgaggc
tatgccagtgcctggcaaatacagaagtggattctcacagtcatctataa
gatagaacacagggaccccaatggagaagctagagaaagcacccaaggag
ctgaagggatctgcaacccttcagattgtggaacaacaatatgaactaaa
cagtacccccagagctcatatctctagctgcatatgtagcagaagatggg
ctagtcggccatcactgggaagagaggacccttggtattgcaaactttat
atgccccaatacaggggaatgccagggccaagaagcaggagtgggtgggt
agggaagcagagcggagggagggtatagggaacattccagatagcatttg
aaatgtacataaagaaaatatcgaataaaaaaataaattaaaaaaataaa
ataaaatggttagtcttgatagtcaaaaaaagatctctaccacaaattca
aactggacattgttcagatcaaaacaatctaatggaaaggagaaagaaca
gtaggagagagtcagcagtctagaggaggtgagcaggaagtgaggatggg
ttttatgaaactcagccgagtttcatgaatttggacagattcacaacacc
tccattaccttccatgctgaatttaaggagaatggacaaaataaaatcaa
taaagttcactgtgacctctgaagcattccgcaaatattcaccagttggt
tgtataataccaaatggtctttcctgaaaacatagtacaagtaacatttt
acaggctgagcaattatatttcaggagtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_17810528_17811534
seq2: B6Ng01-190K22.b_37_1045

seq1  GAATTCAATTAATTGTTGAATGAATAAAATCATTACCAATTTACTTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTAATTGTTGAATGAATAAAATCATTACCAATTTACTTTTTT  50

seq1  TCTTCCCATGGTTTCACAATTTGTTGCTTTCCTCCATTTTCCATCCTGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCATGGTTTCACAATTTGTTGCTTTCCTCCATTTTCCATCCTGCT  100

seq1  ACACATTAAATTAATGCCTTTATTGAACAGTCTGCAGTAACTCTTAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACATTAAATTAATGCCTTTATTGAACAGTCTGCAGTAACTCTTAGTTT  150

seq1  TCCGTCCTGGGAGGACAGAACAAGCTCAGCGCTCATTAGTGTGCGTGCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCGTCCTGGGAGGACAGAACAAGCTCAGCGCTCATTAGTGTGCGTGCCC  200

seq1  AGTTCAAATGATTTGTCTGCTGCACACTCCCTTTCACGCTCCAGAATGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCAAATGATTTGTCTGCTGCACACTCCCTTTCACGCTCCAGAATGGT  250

seq1  CTGGTCTGATCGTTACAGAGCTCTTTAATCTTTCATTTTCTTAGACTAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTCTGATCGTTACAGAGCTCTTTAATCTTTCATTTTCTTAGACTAAG  300

seq1  CTCTACAAATGGCAATGTTTCTTGTCCTGTTTTACTTCATCCTTCAATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTACAAATGGCAATGTTTCTTGTCCTGTTTTACTTCATCCTTCAATTT  350

seq1  AAAAAAAAAATGAAAGGCAAGTTTACCACACACTCTTCTAAAGTAGCACT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAAAATGAAAGGCAAGTTTACCACACACTCTTCTAAAGTAGCACT  400

seq1  CTGAGGAACATGATTACAGGCTACTACTGTGCACAGGCCTAGAAGAATTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGGAACATGATTACAGGCTACTACTGTGCACAGGCCTAGAAGAATTA  450

seq1  ATTTCATTCCTTCAAAACAGAATGTATACCTCCAGGTTATCAGGTTACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCATTCCTTCAAAACAGAATGTATACCTCCAGGTTATCAGGTTACTG  500

seq1  GAGCAGATGCTTTCACTGCCCACAATCCACTGCCAACACACGGTGGAGCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCAGATGCTTTCACTGCCCACAATCCACTGCCAACACACGGTGGAGCA  550

seq1  GGACACGTCTCTGTAATGCCTTCTGACCACCATTGGTCCCACAGCGACCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACACGTCTCTGTAATGCCTTCTGACCACCATTGGTCCCACAGCGACCA  600

seq1  TCAAACACGGTGGCACACTGGAGACTCATACAGAATGACTGCTATGGAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAACACGGTGGCACACTGGAGACTCATACAGAATGACTGCTATGGAGA  650

seq1  AGATGCCTGGGCTTCATGAAAGCCATTTTTAAATGTTTCCAGAGAAGACT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCCTGGGCTTCATGAAAGCCATTTTTAAATGTTTCCAGAGAAGACT  700

seq1  GGGATTGATGGAAGAGCTCATGCCTAGCACATGTGAGGCCCTAGGGTCTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTGATGGAAGAGCTCATGCCTAGCACATGTGAGGCCCTAGGGTCTA  750

seq1  TTCCCTGTCCCAGAAGAGAGACAGAAGTGTTTCCTGAGAGGATTGTATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCTGTCCCAGAAGAGAGACAGAAGTGTTTCCTGAGAGGATTGTATTT  800

seq1  CCTCCTGCTGGGCAGTATGTCCAACTTCAGTGATAACTGTTTCTTCTTCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGCTGGGCAGTATGTCCAACTTCAGTGATAACTGTTTCTTCTTCG  850

seq1  AATTCTCCTCCTCTTCCTCTTCTACTTCTTCTTCTTCATCATCTATTTTA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTCCTCCTCTTCCTCTTCTACTTCTTCTTCTTCATCATCTATTTTA  900

seq1  TTTTCCATGATTTGTTGTTGTCTCTGGG-AAGCCTGTTCTTTTCTAATAA  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  TTTTCCATGATTTGTTGTTGTCTCTGGGAAAGCCTGTTCTTTTCTAATAA  950

seq1  GAGACAGAAAGGGAGTGAATCCAGAGGGGAAGGGATGT-GGGGAGAGACC  998
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  GAGACAGAAAGGGAGTGAATCCAGAGGGGAAGGGATGTGGGGGAGAGACC  1000

seq1  GGGAGGAGT  1007
      |||||||||
seq2  GGGAGGAGT  1009


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