BAC Information

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BAC

Clone NameB6Ng01-202G06
Chromosome19 (Build37)
Map Location 48,671,359 - 48,672,486
singlet/doubletsinglet
Overlap geneSorcs3
Upstream geneSlk, Col17a1, 6330577E15Rik, D19Ertd652e, LOC677174, Gsto1, Gsto2, BC063749, Gm969, LOC670576
Downstream geneLOC100042896
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-202G06.bB6Ng01-202G06.g
ACCGA022893GA022894
length1,123968
definitionB6Ng01-202G06.b B6Ng01-202G06.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
ggaccacaactttttagagactttttcccacctgcatctccatatggagc
ctccagcagtctctaaaggaacactggcttctctatgagagaggacaaac
cccatccaacgttccttcaaattccagagaatagattccagcctttgccc
ccagtcctttggagacatttttcctataaagacatttatctaaaagaggc
atatggtgttcccttagccctgtcactgaacagagggcattttttttctt
tccttcttgaagatttctacccatggggattattcttttatatttctctc
tgatggagtccttctatcactctttaacaaatacagattatgcatccatt
aagacctacccattatatttccatttggggataccatctgtaaataagct
gaggaaaatctgtctgccttcaagagtcttgagtttacttaaagatgcag
gactaaaggacccagaacttcatcgtgcagcatatgagggctgtatgaga
acagtactgctatttgttcttgttagacattggctcatcttgctggcact
taacacagagaatcttattcaagaagaagatttttctcatttatattgaa
actcttgtccctctaagactgttttctatttccctgcttttgatagagac
aaaagggcaaaatacttccaggggcaaatgcaattgtattcagcagaagg
catttcacacaaggttgatgagaggcagagagccccatctaacgctggac
ttagatgcactttggcttatcaaaagctgatctcgtatcattaggttcta
tctcatttcaagggagtctaaaaactctgatttttctgtgaaattttcat
tttaataaccattttggcaaaaaaaatcaaatgtctaatgtaattcataa
ataagatgtgatttgacccagatgggacagatgctgccttagggccacca
gtgtcactgtcccttgtttacttgcctcaagaagcatggctgaaatatgt
catatcaatcgctttaattttataaaaatactagtaacagttttattgta
tctctcatgaaatatcaatccacacttggtattgaatcaactggaatgag
tatctattctgtctggaaatctc

gaattcacctgatggaagtgcaaatcaaaacgaccctgagattcaacatc
acaccagtcagaatggctaagatcaaaaactcagctgacagcagatgctg
gcaaggatgtggagaaagaggaacagtcctccattgctggtgggattgca
agctggtacaaccactctgaaaatcagcctggcagttcctcgaaaattgg
acatagtacaaccttctggcatatacccagaagatgttccaacatcatgt
gtaataaggacacatggtctactatgttcatagctgccatatttataata
gccggaagctggaaagaactcaggagtccctcaacagaggaatggatgca
gaaaatgtagtacattttcacaatggaatactacttagctattaaaaaca
atgacttcatgaaattctcaagcaaatggatgaaacttgtaaacatcatc
ctgagtgaggtaacatagtcacaaaagaacacacatggtatgcactcact
cataagtggatattagttcaaaagcttggaatacccaaggtacaattcac
agaccatatgaagctcaagaagaaagaagaccaaaagtgtgaatgcttca
gtgattcttaggagggggatcaaaatactcataggaggaaatatggagac
aaaatgtggagcagagacagaaagaaagaagggcaatccagagactgcct
actttggggatccatcccatatacagtagccaaacacagatgctatttgt
ggatgccaggaagtgctagtgggagcctgatatggctgtatcctttagag
gctctaccagagcctgacaaatacagaggccagatgctcacagccaacca
ctggactaaacatgtgggtccagatggaggagttggagaagagactgaaa
aagcttgagggaggataaaaattgcactgaccagacccccagagctccca
gggattagactctctatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_48671359_48672486
seq2: B6Ng01-202G06.b_49_1171 (reverse)

seq1  GAGATTCCCAGACAGAAATAGATACTCAATCAAGTTTGGATTTCAAATAC  50
      |||||| |||||||| |||||||||||| || ||||  ||||   |||||
seq2  GAGATTTCCAGACAG-AATAGATACTCATTCCAGTT--GATT--CAATAC  45

seq1  CAAAGTGTGGATTTGATATTTCATGAGAGATACA--TAAACTGTTACTAG  98
      | ||||||||| ||||||||||||||||||||||   |||||||||||||
seq2  C-AAGTGTGGA-TTGATATTTCATGAGAGATACAATAAAACTGTTACTAG  93

seq1  TATTTTTATAAAATTAAAAGCGATTGATAATGACATATTTCAGCCATGCT  148
      ||||||||||||||| |||||||||||| |||||||||||||||||||||
seq2  TATTTTTATAAAATT-AAAGCGATTGAT-ATGACATATTTCAGCCATGCT  141

seq1  TCTTGAGGCAAGTAAAC-AGGGACAGTGACACTGGTGGCCCTAAGGCAGC  197
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TCTTGAGGCAAGTAAACAAGGGACAGTGACACTGGTGGCCCTAAGGCAGC  191

seq1  ATCTGT-CCATCTGGGTCAAATCACATCTTATTTATGAATTACATTAGAC  246
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTGTCCCATCTGGGTCAAATCACATCTTATTTATGAATTACATTAGAC  241

seq1  ATTTGATTTTTTTTGCCAAAATGGTTATTAAAATGAAAATTTCACAGAAA  296
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGATTTTTTTTGCCAAAATGGTTATTAAAATGAAAATTTCACAGAAA  291

seq1  AATCAGAGTTTTTAGACTCCCTTGAAATGAGATAGAACCTAATGATACGA  346
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCAGAGTTTTTAGACTCCCTTGAAATGAGATAGAACCTAATGATACGA  341

seq1  GATCAGCTTTTGATAAGCCAAAGTGCATCTAAGTCCAGCGTTAGATGGGG  396
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAGCTTTTGATAAGCCAAAGTGCATCTAAGTCCAGCGTTAGATGGGG  391

seq1  CTCTCTGCCTCTCATCAACCTTGTGTGAAATGCCTTCTGCTGAATACAAT  446
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGCCTCTCATCAACCTTGTGTGAAATGCCTTCTGCTGAATACAAT  441

seq1  TGCATTTGCCCCTGGAAGTATTTTGCCCTTTTGTCTCTATCAAAAGCAGG  496
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTGCCCCTGGAAGTATTTTGCCCTTTTGTCTCTATCAAAAGCAGG  491

seq1  GAAATAGAAAACAGTCTTAGAGGGACAAGAGTTTCAATATAAATGAGAAA  546
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATAGAAAACAGTCTTAGAGGGACAAGAGTTTCAATATAAATGAGAAA  541

seq1  AATCTTCTTCTTGAATAAGATTCTCTGTGTTAAGTGCCAGCAAGATGAGC  596
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCTTCTTCTTGAATAAGATTCTCTGTGTTAAGTGCCAGCAAGATGAGC  591

seq1  CAATGTCTAACAAGAACAAATAGCAGTACTGTTCTCATACAGCCCTCATA  646
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGTCTAACAAGAACAAATAGCAGTACTGTTCTCATACAGCCCTCATA  641

seq1  TGCTGCACGATGAAGTTCTGGGTCCTTTAGTCCTGCATCTTTAAGTAAAC  696
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGCACGATGAAGTTCTGGGTCCTTTAGTCCTGCATCTTTAAGTAAAC  691

seq1  TCAAGACTCTTGAAGGCAGACAGATTTTCCTCAGCTTATTTACAGATGGT  746
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAAGACTCTTGAAGGCAGACAGATTTTCCTCAGCTTATTTACAGATGGT  741

seq1  ATCCCCAAATGGAAATATAATGGGTAGGTCTTAATGGATGCATAATCTGT  796
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCAAATGGAAATATAATGGGTAGGTCTTAATGGATGCATAATCTGT  791

seq1  ATTTGTTAAAGAGTGATAGAAGGACTCCATCAGAGAGAAATATAAAAGAA  846
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTAAAGAGTGATAGAAGGACTCCATCAGAGAGAAATATAAAAGAA  841

seq1  TAATCCCCATGGGTAGAAATCTTCAAGAAGGAAAGAAAAAAAATGCCCTC  896
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATCCCCATGGGTAGAAATCTTCAAGAAGGAAAGAAAAAAAATGCCCTC  891

seq1  TGTTCAGTGACAGGGCTAAGGGAACACCATATGCCTCTTTTAGATAAATG  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCAGTGACAGGGCTAAGGGAACACCATATGCCTCTTTTAGATAAATG  941

seq1  TCTTTATAGGAAAAATGTCTCCAAAGGACTGGGGGCAAAGGCTGGAATCT  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTATAGGAAAAATGTCTCCAAAGGACTGGGGGCAAAGGCTGGAATCT  991

seq1  ATTCTCTGGAATTTGAAGGAACGTTGGATGGGGTTTGTCCTCTCTCATAG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTGGAATTTGAAGGAACGTTGGATGGGGTTTGTCCTCTCTCATAG  1041

seq1  AGAAGCCAGTGTTCCTTTAGAGACTGCTGGAGGCTCCATATGGAGATGCA  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGCCAGTGTTCCTTTAGAGACTGCTGGAGGCTCCATATGGAGATGCA  1091

seq1  GGTGGGAAAAAGTCTCTAAAAAGTTGTGGTCC  1128
      ||||||||||||||||||||||||||||||||
seq2  GGTGGGAAAAAGTCTCTAAAAAGTTGTGGTCC  1123


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