BAC Information

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BAC

Clone NameB6Ng01-203A09
Chromosome19 (Build37)
Map Location 52,834,185 - 52,835,252
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC668536, LOC100042936, Ins1
Downstream geneLOC100043450, Xpnpep1, LOC668545, LOC674277, Add3, 1700001K23Rik, Mxi1, Smndc1, Dusp5, LOC100043462, Smc3, Rbm20
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-203A09.bB6Ng01-203A09.g
ACCGA023353GA023354
length1,056734
definitionB6Ng01-203A09.b B6Ng01-203A09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggaagaggtgactattatcaaagtacattgaccaaaactctca
aagaactagtaaaagaattccaaaggagaagcaattgaacaagtggaagg
agaatctgagtgctgaagtcttcactgtattgctactcttgacttcaaga
aaacagaaaggaagacaacgatttcagtacaagaaataggcaacttcaat
caatatagataagccagagtgcaaaaggcaactcctgttgcataccaagt
gtatgatgttgtgctttctaggtcatcacaggcaatcttggaaacagtgt
tataaatgaggcattcttgttttgtcaatattgcatattatcaattcaca
gatgaatacacaaaatcaaagaatgatgactttatataaagacatacagc
ttagaagctgaaaagccatggtttgaatgcccatcagccagacatagata
tgctaactcctctagggagcttaggtaagaatccttatccagttcagact
ggttcctgtttagaggcactgaagaaaactatttcaaaaaaacaacaaaa
tttacaatagagcaatggagaatggggtaagagataagtgagaaataaga
tcttagagtaaaattctgacagccactgtgctggctagattttctttttt
ctcttttcttaactctacacagctagagttatctgagaggagggaacctc
taaatcaaccaagcaaagcatctgtggactcacagggatggaagcagcaa
gtgcagggcctacccaggtctagaccacaccctctgcatacctaccatac
ctttcagcttagtactttcatgggacccctgagtgtgtaaacaagtgggt
ctctggttcttgtgccttctctcctggggctctttcccttctgctggttt
gccagatccaacttagatgtgatggttttgttttgtcttatatatttatt
ttgttgttacaaaggatggaaaaaattaaaccctgagagaaaaaaagaaa
catgccttgagagattggactgttgaggagcagagggaaggagctgttgg
gagggg
gaattcttgaaattcttaggcaaatggatagaactagaaaatatcatcct
gagtgaagcaatctaatcacaaaagaacacacatggtatgcactcactga
taagtgagtattagcccagaagctcggaatacccaagatacaattcatag
accacatgaagcacaagaagaaggaataccaacgtgttgttacttcagtc
tttcttagaagagggaacaaaatacccatgggaggagatacagagaccaa
gtgtggaataaagactgaaagaaaggtcatccagaaactgccccacctga
ggatccctcccatatagtttccaaacccagaaaacaagtacttgctgaca
ggagtctgatatagatgtctcctgagaggctctgccggtgcctgacaaat
acagaggtgggtgctctagccaaccattggactgagcacagggtccccaa
tggaggagctagagaaaggagccaaggaactgaaggggtttgccccaaat
ggggaacaacaatatcaaccaaccagagttcccggggtctaaacctccaa
ccaaggagtacacatggagggacccatggctccagctgcatatgtagcag
aggatgaccttgttggacatcaatgctatgaaagaaccttggtcctgtga
agactcgataccccagtgtaggggaatgccaggacagggaagcaggagtg
aacggattgttgatcagggggaggagggatggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_52834185_52835252
seq2: B6Ng01-203A09.b_46_1101 (reverse)

seq1  CCCCTCCC-ACAGCTCCTTCCCCTCTTGCTCCCTTCACCAGTCCAATCTT  49
      |||||||| |||||||||| ||||| ||||||  ||| |||||||||| |
seq2  CCCCTCCCAACAGCTCCTT-CCCTC-TGCTCC--TCAACAGTCCAATC-T  45

seq1  CTCAAGGCATGTTTCTTTTTTTCTTCTTCCAGGTTTTAATTTTTTCCATT  99
      ||||||||||||||||||||||| |||  |||| ||||||||||||||| 
seq2  CTCAAGGCATGTTTCTTTTTTTC-TCT--CAGGGTTTAATTTTTTCCATC  92

seq1  CTTTTTGTAACAACAAAATAAAATATAATAAGACAAAACAAAAACCATCA  149
      |  |||||||||||||||| |||||| |||||||||||| ||||||||||
seq2  C--TTTGTAACAACAAAAT-AAATAT-ATAAGACAAAAC-AAAACCATCA  137

seq1  CATCTAAGTTGGATCTGGCAAACCAGCAGAAGGGAAAGAGCCCCAGGAGA  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCTAAGTTGGATCTGGCAAACCAGCAGAAGGGAAAGAGCCCCAGGAGA  187

seq1  GAAGGCACAAGAACCAGAGACCCACTTGTTTACACACTCAGGGGTCCCAT  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGCACAAGAACCAGAGACCCACTTGTTTACACACTCAGGGGTCCCAT  237

seq1  GAAAGTACTAAGCTGAAAGGTATGGTAGGTATGCAGAGGGTGTGGTCTAG  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAGTACTAAGCTGAAAGGTATGGTAGGTATGCAGAGGGTGTGGTCTAG  287

seq1  ACCTGGGTAGGCCCTGCACTTGCTGCTTCCATCCCTGTGAGTCCACAGAT  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTGGGTAGGCCCTGCACTTGCTGCTTCCATCCCTGTGAGTCCACAGAT  337

seq1  GCTTTGCTTGGTTGATTTAGAGGTTCCCTCCTCTCAGATAACTCTAGCTG  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTGCTTGGTTGATTTAGAGGTTCCCTCCTCTCAGATAACTCTAGCTG  387

seq1  TGTAGAGTTAAGAAAAGAGAAAAAAGAAAATCTAGCCAGCACAGTGGCTG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAGTTAAGAAAAGAGAAAAAAGAAAATCTAGCCAGCACAGTGGCTG  437

seq1  TCAGAATTTTACTCTAAGATCTTATTTCTCACTTATCTCTTACCCCATTC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGAATTTTACTCTAAGATCTTATTTCTCACTTATCTCTTACCCCATTC  487

seq1  TCCATTGCTCTATTGTAAATTTTGTTGTTTTTTTGAAATAGTTTTCTTCA  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCATTGCTCTATTGTAAATTTTGTTGTTTTTTTGAAATAGTTTTCTTCA  537

seq1  GTGCCTCTAAACAGGAACCAGTCTGAACTGGATAAGGATTCTTACCTAAG  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCCTCTAAACAGGAACCAGTCTGAACTGGATAAGGATTCTTACCTAAG  587

seq1  CTCCCTAGAGGAGTTAGCATATCTATGTCTGGCTGATGGGCATTCAAACC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCCTAGAGGAGTTAGCATATCTATGTCTGGCTGATGGGCATTCAAACC  637

seq1  ATGGCTTTTCAGCTTCTAAGCTGTATGTCTTTATATAAAGTCATCATTCT  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTTTTCAGCTTCTAAGCTGTATGTCTTTATATAAAGTCATCATTCT  687

seq1  TTGATTTTGTGTATTCATCTGTGAATTGATAATATGCAATATTGACAAAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGATTTTGTGTATTCATCTGTGAATTGATAATATGCAATATTGACAAAA  737

seq1  CAAGAATGCCTCATTTATAACACTGTTTCCAAGATTGCCTGTGATGACCT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAATGCCTCATTTATAACACTGTTTCCAAGATTGCCTGTGATGACCT  787

seq1  AGAAAGCACAACATCATACACTTGGTATGCAACAGGAGTTGCCTTTTGCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGCACAACATCATACACTTGGTATGCAACAGGAGTTGCCTTTTGCA  837

seq1  CTCTGGCTTATCTATATTGATTGAAGTTGCCTATTTCTTGTACTGAAATC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGCTTATCTATATTGATTGAAGTTGCCTATTTCTTGTACTGAAATC  887

seq1  GTTGTCTTCCTTTCTGTTTTCTTGAAGTCAAGAGTAGCAATACAGTGAAG  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTCTTCCTTTCTGTTTTCTTGAAGTCAAGAGTAGCAATACAGTGAAG  937

seq1  ACTTCAGCACTCAGATTCTCCTTCCACTTGTTCAATTGCTTCTCCTTTGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGCACTCAGATTCTCCTTCCACTTGTTCAATTGCTTCTCCTTTGG  987

seq1  AATTCTTTTACTAGTTCTTTGAGAGTTTTGGTCAATGTACTTTGATAATA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCTTTTACTAGTTCTTTGAGAGTTTTGGTCAATGTACTTTGATAATA  1037

seq1  GTCACCTCTTCCTGAATTC  1068
      |||||||||||||||||||
seq2  GTCACCTCTTCCTGAATTC  1056