BAC Information

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BAC

Clone NameB6Ng01-219O10
Chromosome19 (Build37)
Map Location 11,584,201 - 11,585,199
singlet/doubletsinglet
Overlap geneEG666926
Upstream gene0610038F07Rik, 5730453I16Rik, 2810441K11Rik, Tmem138, Cybasc3, Dak, Ddb1, Vwce, Pga5, 2210404E10Rik, Vps37c, Cd5, Cd6, Slc15a3, Tmem132a, Tmem109, Prpf19, Zp1, Gpr44, Ccdc86, Ms4a10, E530011F12Rik, 5033428B15Rik, AW112010, Ms4a8a, Gm336, LOC624395, 1700025F22Rik, Ms4a13, Ms4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c
Downstream geneMs4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1, Olfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-219O10.bB6Ng01-219O10.g
ACCGA035602GA035603
length6321,183
definitionB6Ng01-219O10.b B6Ng01-219O10.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaaggtttgatcgaattctgcactaaacccatctggtcctgggctttttt
tttttttttttttggttgggagacttttgatgacagcttctatgttgaga
agttatgggagtgtttatatagtttatcttatcctgatttaattttggta
tttggtatctgtctagaaagttgtccatttcatccagattttccagttgt
gttgaatataggcttttgtagtagggtctgatgatttttttttttttgca
tttactcagtttttgttgttatatctcctttttcatttctgattttgtta
atttggatactgcctctgtgccctctggttagtctggctaagggttttat
ctatttttgtcgatttttctcaaagaaccagctcctggtttttggttgac
tctttgtatagttctttttgtttctacttgggttgatttcagcccctgtg
tttattttcctgccttctattccctcttgagtgtattttgcttctttttt
ttctagatcttccagatgtactatttaagctgcctagtgtatgctcttct
ccagtttcttttctggaagcactcagagctatgagttttttccctagact
tgcctttgatgctgttccattattttgagtat
gaattctcacctgaggaataccgaatggcagagaagcaccggaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagttcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggtggttcctca
gaaaattggacatagtactaccggaagatcctgcaatacctctcctgggc
atatatccagaagatgtcccaaccggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcctctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggttggacctggagggcatcatcctgagtgaggtaacacaatcacaaa
agaactcaaataatatgtactcactgataagtggatattagcccagaaac
ttagtatagtgagatataaggtacaatttgcaaaacacatgaaactgaag
aagaacgaagaccaaagtgtggatactttgcccctctgagtttcctaatt
tcattaataataaagtttaaagctagactcagaaggaaacccgaaacaag
agaagactgaaaaagcccataaagtctaagaacacatatttaggagtgcc
aattcacagctctgagttcagaggtcacccaattctagatccttgtgttg
cagagcaaaggactgtaccattcactcatgttagaaatagagagagttta
tcaagaaaagaaagcattcctaagaatggaagtggactagtgagctgtag
aaagagcctgaagggcacccagccacagagtgagcaccgtttatacgacc
attatagactcggactttttgtttgcatctggtggactcactgcccacac
tcactcagtatgctgttctccttagatgaagccaagtgaagaaagagtta
gagttaaggtcttctgtgtaactgatttcttcacagttagactgactact
tacagtttaagtggttttttatcaaagttccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_11584201_11585199
seq2: B6Ng01-219O10.g_257_1251

seq1  CCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATCAGTCT  50

seq1  GGTGGTTCCTCAGAAAATTGGACATAGTACTACCGGAAGATCCTGCAATA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGTTCCTCAGAAAATTGGACATAGTACTACCGGAAGATCCTGCAATA  100

seq1  CCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCTCCTGGGCATATATCCAGAAGATGTCCCAACCGGTAAGAAGGACAC  150

seq1  ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCCACTATGTTCATAGCAGCCTTATTTATAATAGCCAGAAGCTGGA  200

seq1  AAGAACCCAGATGCCTCTCAACAGAGGAATGGATACAGAAAATGTGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAACCCAGATGCCTCTCAACAGAGGAATGGATACAGAAAATGTGGTAC  250

seq1  ATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTTATGAA  300

seq1  ATTCCTAGCCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTAGCCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGAGGTAA  350

seq1  CACAATCACAAAAGAACTCAAATAATATGTACTCACTGATAAGTGGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAATCACAAAAGAACTCAAATAATATGTACTCACTGATAAGTGGATAT  400

seq1  TAGCCCAGAAACTTAGTATAGTGAGATATAAGGTACAATTTGCAAAACAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCCCAGAAACTTAGTATAGTGAGATATAAGGTACAATTTGCAAAACAC  450

seq1  ATGAAACTGAAGAAGAACGAAGACCAAAGTGTGGATACTTTGCCCCTCTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAACTGAAGAAGAACGAAGACCAAAGTGTGGATACTTTGCCCCTCTG  500

seq1  AGTTTCCTAATTTCATTAATAATAAAGTTTAAAGCTAGACTCAGAAGGAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTCCTAATTTCATTAATAATAAAGTTTAAAGCTAGACTCAGAAGGAA  550

seq1  ACCCGAAACAAGAGAAAGACTGAAAAAGCCCATAAAGTCTAAGAACACAT  600
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACCCGAAACAAGAG-AAGACTGAAAAAGCCCATAAAGTCTAAGAACACAT  599

seq1  ATTTAGGAGTGCCAATTCACAGCTCTGAGTTCAGAGGTCACCCAATTCTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTAGGAGTGCCAATTCACAGCTCTGAGTTCAGAGGTCACCCAATTCTA  649

seq1  GATCCTTGTGTTGCAGAGCAAAGGACTGTACCATTCACTCATGTTAGAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCCTTGTGTTGCAGAGCAAAGGACTGTACCATTCACTCATGTTAGAAA  699

seq1  TAGAGAGAGTTTATCAAGAAAAGAAAGCATTCCTAAGAATGGAAGTGGAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAGAGAGTTTATCAAGAAAAGAAAGCATTCCTAAGAATGGAAGTGGAC  749

seq1  TAGTGAGCTGTAGAAAGAGCCTGAAGGGCACCCAGCCACAGAGTGAAGCA  800
      ||||||||||||||||||||||||||||||||||||||||||||| ||||
seq2  TAGTGAGCTGTAGAAAGAGCCTGAAGGGCACCCAGCCACAGAGTG-AGCA  798

seq1  CCGTTTATACGACCATTATAGACTCGGACTTTTTGTTTGCATCTGGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGTTTATACGACCATTATAGACTCGGACTTTTTGTTTGCATCTGGTGGA  848

seq1  CTCACTGCCCCACAACCTCACTCAGTATGCTGTCTCCCTTAGATGAAGCC  900
      ||||||| ||||||  |||||||||||||||||   |||||||||||| |
seq2  CTCACTG-CCCACA--CTCACTCAGTATGCTGTTCTCCTTAGATGAAG-C  894

seq1  CAAGTGAAG-AAGAGTTTAGAGTTTAGAGTCTTCTGTGT-ACTGGTTTCT  948
      ||||||||| ||||| |||||||| || ||||||||||| |||| |||| 
seq2  CAAGTGAAGAAAGAG-TTAGAGTTAAG-GTCTTCTGTGTAACTGATTTC-  941

seq1  TTCACATTATAAATGACCTACTTACATTTAATGTG--TTTTTATCAAA--  994
      |||||| |   | ||| ||||||||| || | |||  |||||||||||  
seq2  TTCACAGTTAGACTGA-CTACTTACAGTTTAAGTGGTTTTTTATCAAAGT  990

seq1  TCCAG  999
      |||||
seq2  TCCAG  995