MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-223A16
Chromosome	19 (Build37)
Map Location	47,804,517 - 47,960,089
singlet/doublet	doublet
Overlap gene	6330577E15Rik, D19Ertd652e, LOC677174, Gsto1, Gsto2
Upstream gene	As3mt, Cnnm2, Nt5c2, Ina, Pcgf6, LOC100042842, Taf5, Usmg5, Pdcd11, 2810048G17Rik, EG546729, EG240669, EG629389, Neurl, EG329070, Sh3pxd2a, Obfc1, Slk, Col17a1
Downstream gene	BC063749, Gm969, LOC670576, Sorcs3, LOC100042896
Link	Open Mouse BAC browser

Click to get alignment info.

name	As3mt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:57344 MGI:1929882
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cnnm2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:94219 MGI:2151054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Nt5c2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76952 MGI:2178563
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Ina (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226180 MGI:96568
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pcgf6 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71041 MGI:1918291
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042842 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042842
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 8 Proteins pseudo : _no_value

name	Taf5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:226182 MGI:2442144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Usmg5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66477 MGI:1891435
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Pdcd11 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18572 MGI:1341788
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2810048G17Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72691 MGI:1919941
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG546729 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:546729 MGI:3643383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG240669 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240669 MGI:3645665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	EG629389 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:629389 MGI:3645322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins

name	Neurl (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18011 MGI:1334263
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	EG329070 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:329070 MGI:3647497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3pxd2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14218 MGI:1298393
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Obfc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108689 MGI:1915581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Slk (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:20874 MGI:103241
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col17a1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12821 MGI:88450
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6330577E15Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:67788 MGI:1915038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	D19Ertd652e (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70806 MGI:1289258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 2 Proteins

name	LOC677174 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:677174
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Gsto1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14873 MGI:1342273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gsto2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68214 MGI:1915464
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	BC063749 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:414801 MGI:3042776
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gm969 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:381229 MGI:2685815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein

name	LOC670576 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:670576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Sorcs3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66673 MGI:1913923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100042896 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein

name	As3mt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:119392104 GeneID:57344 MGI:1929882
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : arsenic (+3 oxidation state) methyltransferase transcript_id : NM_020577.2

name	Cnnm2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130766 GeneID:94219 MGI:2151054
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cyclin M2 transcript_id : NM_033569.2

name	Nt5c2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802147 GeneID:76952 MGI:2178563
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 5'-nucleotidase, cytosolic II transcript_id : NM_029810.3

name	Ina (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142354520 GeneID:226180 MGI:96568
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : internexin neuronal intermediate filament protein, alpha transcript_id : NM_146100.3

name	Pcgf6 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351956 GeneID:71041 MGI:1918291
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : polycomb group ring finger 6 transcript_id : NM_027654.2

name	Taf5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:110665721 GeneID:226182 MGI:2442144
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor transcript_id : NM_177342.3

name	Usmg5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351604 GeneID:66477 MGI:1891435
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : upregulated during skeletal muscle growth 5 transcript_id : NM_023211.4

name	Pdcd11 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:54607127 GeneID:18572 MGI:1341788
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death protein 11 transcript_id : NM_011053.2

name	2810048G17Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801704 GeneID:72691 MGI:1919941
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 2810048G17 gene transcript_id : NM_133746.3

name	EG546729 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124486908 GeneID:546729 MGI:3643383
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG546729 transcript_id : NM_001081271.1

name	EG240669 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270501 GeneID:240669 MGI:3645665
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : predicted gene, EG240669 transcript_id : XM_140729.8

name	EG629389 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406028 GeneID:629389 MGI:3645322
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST, 17 Proteins product : predicted gene, EG629389 transcript_id : XM_894271.2

name	Neurl (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71534277 GeneID:18011 MGI:1334263
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : neuralized-like homolog (Drosophila) transcript_id : NM_021360.3

name	EG329070 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31342895 GeneID:329070 MGI:3647497
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : predicted gene, EG329070 transcript_id : NM_177833.2

name	Sh3pxd2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351646 GeneID:14218 MGI:1298393
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3 and PX domains 2A transcript_id : NM_008018.2

name	Obfc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31341702 GeneID:108689 MGI:1915581
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : oligonucleotide/oligosaccharide-binding fold containing 1 transcript_id : NM_175360.2

name	Slk (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142360252 GeneID:20874 MGI:103241
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : STE20-like kinase (yeast) transcript_id : NM_009289.2

name	Col17a1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6680963 GeneID:12821 MGI:88450
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : procollagen, type XVII, alpha 1 transcript_id : NM_007732.1

name	6330577E15Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:125662572 GeneID:67788 MGI:1915038
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 6330577E15 gene transcript_id : NM_026377.2

name	D19Ertd652e (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270505 GeneID:70806 MGI:1289258
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 18 ESTs, 2 Proteins product : DNA segment, Chr 19, ERATO Doi 652, expressed transcript_id : XM_129357.7

name	Gsto1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892764 GeneID:14873 MGI:1342273
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione S-transferase omega 1 transcript_id : NM_010362.2

name	Gsto2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21311856 GeneID:68214 MGI:1915464
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glutathione S-transferase omega 2 transcript_id : NM_026619.1

name	BC063749 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:111185915 GeneID:414801 MGI:3042776
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cDNA sequence BC063749 transcript_id : NM_001001738.2

name	Gm969 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406034 GeneID:381229 MGI:2685815
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 2 ESTs, 1 Protein product : gene model 969, (NCBI) transcript_id : XM_355166.3

name	LOC670576 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270509 GeneID:670576
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical LOC670576 transcript_id : XM_001479010.1

name	Sorcs3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130290 GeneID:66673 MGI:1913923
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sortilin-related VPS10 domain containing receptor 3 transcript_id : NM_025696.3

name	LOC100042896 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270511 GeneID:100042896
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein product : similar to GRound-Like (grd related) family member (grl-25) transcript_id : XM_001479015.1

name	As3mt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:119392105 GeneID:57344 MGI:1929882
definition	GO_component : GO:0005829 - cytosol [Evidence ISS]; GO:0005625 - soluble fraction [Evidence ISS] GO_function : GO:0030791 - arsenite methyltransferase activity [Evidence ISS]; GO:0030792 - methylarsonite methyltransferase activity [Evidence ISS]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0018872 - arsonoacetate metabolism [Evidence ISS]; GO:0046685 - response to arsenic [Evidence ISS]; GO:0009404 - toxin metabolism [Evidence ISS] codon_start : 1 note : S-adenosylmethionine:arsenic (III) methyltransferase; methylarsonite methyltransferase; methyltransferase Cyt19 product : arsenic (+3 oxidation state) methyltransferase protein_id : NP_065602.2

name	Cnnm2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:15809000 GeneID:94219 MGI:2151054
definition	GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND] codon_start : 1 note : ancient conserved domain protein 2 product : cyclin M2 protein_id : NP_291047.1

name	Nt5c2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560044 CCDS:CCDS29883.1 GeneID:76952 MGI:2178563
definition	GO_function : GO:0008253 - 5'-nucleotidase activity [Evidence IEA] codon_start : 1 exception : mismatches in translation product : 5'-nucleotidase, cytosolic II protein_id : NP_084086.2

name	Ina (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34328368 GeneID:226180 MGI:96568
definition	GO_component : GO:0005882 - intermediate filament [Evidence IEA] GO_function : GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0045104 - intermediate filament cytoskeleton organization and biogenesis [Evidence IMP]; GO:0007399 - nervous system development [Evidence IEA] codon_start : 1 exception : unclassified translation discrepancy product : internexin neuronal intermediate filament protein, alpha protein_id : NP_666212.2

name	Pcgf6 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28076973 CCDS:CCDS29885.1 GeneID:71041 MGI:1918291
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence ISS]; GO:0019904 - protein domain specific binding [Evidence ISS]; GO:0016564 - transcriptional repressor activity [Evidence ISS]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence ISS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : Mel18- and Bmi1-like RING finger protein; Mel18 and Bmi1-like RING finger protein; ring finger protein 134 product : polycomb group ring finger 6 protein_id : NP_081930.1

name	Taf5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110665722 CCDS:CCDS29886.1 GeneID:226182 MGI:2442144
definition	GO_component : GO:0005669 - transcription factor TFIID complex [Evidence ISS] GO_function : GO:0030528 - transcription regulator activity [Evidence IEA] GO_process : GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : TAF5 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 100kDa product : Tbp-associated factor 5 protein_id : NP_796316.2

name	Usmg5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:77404294 GeneID:66477 MGI:1891435
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA] codon_start : 1 product : upregulated during skeletal muscle growth 5 protein_id : NP_075700.2

name	Pdcd11 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:54607128 CCDS:CCDS29888.1 GeneID:18572 MGI:1341788
definition	GO_component : GO:0005829 - cytosol [Evidence IDA]; GO:0005622 - intracellular [Evidence IEA] GO_function : GO:0005488 - binding [Evidence IEA]; GO:0016787 - hydrolase activity [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IDA] [Evidence ISS] [Evidence TAS]; GO:0043123 - positive regulation of I-kappaB kinase/NF-kappaB cascade [Evidence ISS] [Evidence TAS]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence TAS] [Evidence ISS] [Evidence IDA]; GO:0006396 - RNA processing [Evidence IEA] codon_start : 1 note : programmed cell death protein 7 product : programmed cell death protein 11 protein_id : NP_035183.2

name	2810048G17Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981572 CCDS:CCDS29889.1 GeneID:72691 MGI:1919941
definition	GO_component : GO:0016020 - membrane [Evidence IEA] codon_start : 1 exception : mismatches in translation product : hypothetical protein LOC72691 protein_id : NP_598507.2

name	EG546729 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124486909 GeneID:546729 MGI:3643383
definition	codon_start : 1 product : predicted gene, EG546729 protein_id : NP_001074740.1

name	EG240669 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270502 GeneID:240669 MGI:3645665
definition	codon_start : 1 product : similar to Family with sequence similarity 26, member A protein_id : XP_140729.8

name	EG629389 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406029 GeneID:629389 MGI:3645322
definition	codon_start : 1 product : similar to Histone H1 protein_id : XP_899364.2

name	Neurl (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71534278 CCDS:CCDS29890.1 GeneID:18011 MGI:1334263
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA] [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS]; GO:0005886 - plasma membrane [Evidence IDA] GO_function : GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] [Evidence IPI]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007595 - lactation [Evidence IMP]; GO:0009605 - response to external stimulus [Evidence IMP]; GO:0007288 - sperm axoneme assembly [Evidence IMP]; GO:0030317 - sperm motility [Evidence IMP] codon_start : 1 exception : mismatches in translation product : neuralized homolog protein_id : NP_067335.3

name	EG329070 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:29244408 GeneID:329070 MGI:3647497
definition	codon_start : 1 product : hypothetical protein LOC329070 protein_id : NP_808501.1

name	Sh3pxd2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679801 CCDS:CCDS29891.1 GeneID:14218 MGI:1298393
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation note : five SH3 domains product : SH3 multiple domains 1 protein_id : NP_032044.1

name	Obfc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:28827826 CCDS:CCDS29892.1 GeneID:108689 MGI:1915581
definition	GO_function : GO:0003676 - nucleic acid binding [Evidence IEA] codon_start : 1 product : oligonucleotide/oligosaccharide-binding fold containing 1 protein_id : NP_780569.1

name	Slk (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7106427 GeneID:20874 MGI:103241
definition	GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0004674 - protein serine/threonine kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA] codon_start : 1 exception : mismatches in translation note : Ste20-related kinase; serine/threonine kinase 2 product : STE20-like kinase protein_id : NP_033315.1

name	Col17a1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6680964 GeneID:12821 MGI:88450
definition	GO_component : GO:0005581 - collagen [Evidence IEA]; GO:0005737 - cytoplasm [Evidence IEA]; GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IEA]; GO:0030056 - hemidesmosome [Evidence IDA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0030020 - extracellular matrix structural constituent conferring tensile strength [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IEA] GO_process : GO:0007155 - cell adhesion [Evidence IEA]; GO:0006817 - phosphate transport [Evidence IEA] codon_start : 1 exception : mismatches in translation product : procollagen, type XVII, alpha 1 protein_id : NP_031758.1

name	6330577E15Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:125662573 GeneID:67788 MGI:1915038
definition	codon_start : 1 product : hypothetical protein LOC67788 protein_id : NP_080653.2

name	D19Ertd652e (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270506 GeneID:70806 MGI:1289258
definition	codon_start : 1 product : hypothetical protein LOC70806 protein_id : XP_129357.7

name	Gsto1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754090 CCDS:CCDS29893.1 GeneID:14873 MGI:1342273
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 note : glutathione-S-transferase like; glutathione S-transferase like product : glutathione S-transferase omega 1 protein_id : NP_034492.1

name	Gsto2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21311857 CCDS:CCDS29894.1 GeneID:68214 MGI:1915464
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA] GO_function : GO:0004364 - glutathione transferase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0008152 - metabolism [Evidence IEA] codon_start : 1 exception : mismatches in translation product : glutathione S-transferase omega 2 protein_id : NP_080895.1

name	BC063749 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111185916 CCDS:CCDS29895.1 GeneID:414801 MGI:3042776
definition	codon_start : 1 product : hypothetical protein LOC414801 protein_id : NP_001001738.2

name	Gm969 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:38085189 GeneID:381229 MGI:2685815
definition	codon_start : 1 product : hypothetical protein protein_id : XP_355166.1

name	LOC670576 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270510 GeneID:670576
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479060.1

name	Sorcs3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956144 GeneID:66673 MGI:1913923
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0008565 - protein transporter activity [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA] codon_start : 1 product : sortilin-related VPS10 domain containing receptor 3 protein_id : NP_079972.1

name	LOC100042896 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270512 GeneID:100042896
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479065.1

name	LOC100042842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042842
definition	number : 2 pseudo : _no_value

name	LOC100042842 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042842
definition	number : 1 pseudo : _no_value

name	LOC677174 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:677174
definition	number : 1 pseudo : _no_value

clone name	MSMg01-466F07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159D06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108K11
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-545A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289M14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-526E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-379I01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069B03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-218M03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-218C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499N21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547D08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-149L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-131K24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-528I15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-454P13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-106O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-155M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-424J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-426F10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-431K18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-195M08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-500M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-326L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-145J05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-448N05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-485F20
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-440O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-379D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-415E02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-073P04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-130N20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-421H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-146D14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439H17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-513M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-265H21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-142A20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147L11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-334N10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-437H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-271F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-104G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-366G05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-430M11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-116L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-232G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-421B05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139O03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-515C12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544O20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-132F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-535K20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-349J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-344H12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-122P21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-524D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384D09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-125I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130G02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153F13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-387D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-104I10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-303H15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332L19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108C05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-419N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275G02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318L08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091J15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-145C10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073B24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-157M19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053E10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331D03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012D21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339F14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244P04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-230E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-115I10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-276P19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-081C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-092P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-096K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330L05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079M10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217P21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-041C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-018B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337F15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-266I11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296L09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257H11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-107D20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-030F10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281P24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-314G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246K07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-072C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-271O15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-210J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254J23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-138G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-050M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142N13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-055P14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-305O09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-175K04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223E12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-270B14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-263N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032B20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-002G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-136C12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-164N11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-091G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163L07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-058D07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217H05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-323A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202G12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-202G06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-172P03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079H04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240E01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090J01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-002G19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-056I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057F02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-275A06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015B05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-184M12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281G08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178F23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-023I07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-159A07
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-223A16.b	B6Ng01-223A16.g
ACC	GA037894	GA037895
length	962	415
definition	B6Ng01-223A16.b	B6Ng01-223A16.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(47,804,517 - 47,805,480)	(47,959,668 - 47,960,089)
sequence	gaattccagaccagtctgggctacaaagcaaggtccagaacaaccagggg agttacagaggaaccctgtcttaaaaaaccatcaaacaaaacaacctcct gtccccaagtaatgaattctgttcttgctgtttcttaaacatttaggagt ggaacattaatttattaatggtcacatgtgaaggcttgacgttttctggt atttatggcttaagttgtgtggacttttagctatcatagcactcttttaa aaatccgtgcttttgggaaaggtaagggataaaagcttgtgagacattgc tttaagtcaattagggaatgacgaatatgcttgactaaatgttcctttgg tgttttgcatgattctagctgcctctcatacattatcattgaatttccct gtctctaggaggtgaatattgttctcatttaccaagccatcgaactgagg tccacggccacactacactccattgcacaaaacaaaaacaaaccaaagaa gaaaccgtggtgccaggactctaatctaggcaattgcaacatctgcagat ctaatcacctcattaagttcctttaggttctgtatttattaactgaccgc ctaggagtctaatcagttctttcgggttactttaaagccactattagcag atattcggaaagagagctgtcccttattacaaacttcccagtgactcaca agttagctcaacttctctacacccacggctccacccaagctagttcattt tgctgttgcatagcaacagaacatcctgaacactagaaagccgtgcagcc tcccagagtctagcaaggggcctcctgggggccccagagcctagcaaggg ggcatcccgggagtcgagccagggtctagcaaggggcctccgggggtccc cccagagtctagtaaggggcaccccaggagtcgagccaggtctagcaagg ggccttcggggg	cagtctagggtctggcagacgacccactaaggtcagacagctggtaggct ggcggccaggacacttgttagagtcttactaatctggggctctccaccct gccgtggaaggaggtgggcttataagttacctgtatgtcttgccacccag tcttgtgtctaatccaaagagctactttccaaaccctagagatgccaggc atgcctgatgtggctggctggtgtccgagtcagaagcactgcacgtggcc agtgtcacctctgagctttaaatatccctgccacactttaaacatgctta gagtgtggcactggtgtgtgatacgtggctgctactttgtttatatgaag agtaacacgtgggttgctttggaaacctgattttcaaagggcacttctat ttgggggggggggcg
quality values	Open. Hide. 58 36 24 26 58 40 22 13 48 54 52 42 31 62 62 62 62 62 62 62 62 62 56 62 47 62 62 62 62 62 51 56 62 22 31 39 11 13 28 25 18 28 34 30 23 20 23 34 62 62 46 62 62 62 62 62 59 62 62 62 54 62 62 59 62 62 62 62 59 62 62 59 62 62 62 62 62 43 39 43 30 38 36 30 34 46 36 28 32 45 42 48 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 38 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 51 39 50 34 18 28 32 28 45 50 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 62 62 51 56 62 62 62 62 62 62 62 62 62 56 62 62 62 54 62 62 62 62 62 56 62 62 62 56 56 62 47 51 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 56 56 56 62 56 62 62 62 62 56 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 38 54 62 62 62 62 62 62 62 62 62 39 49 62 62 62 62 62 62 62 47 54 62 54 62 48 54 54 42 54 45 34 54 58 54 46 58 54 54 54 52 47 58 52 58 58 58 58 52 58 58 52 50 50 41 52 54 47 32 48 38 45 39 54 49 54 54 42 54 42 54 42 52 32 16 54 35 40 45 54 52 52 52 49 54 58 42 58 31 58 50 50 32 22 26 50 47 40 42 58 51 34 48 37 50 42 48 48 46 52 51 34 51 49 52 53 42 51 50 35 50 50 46 50 49 48 29 29 58 50 50 53 51 46 34 32 50 58 58 53 52 52 53 39 48 30 50 54 52 29 33 33 58 50 41 28 27 16 27 36 58 15 33 28 35 50 49 39 36 39 50 42 32 58 58 44 39 32 42 51 18 39 39 32 42 45 53 37 42 53 40 46 25 40 38 34 39 39 39 37 38 49 30 35 30 31 37 37 32 32 18 35 54 13 18 9 34 32 35 41 34 37 32 28 54 41 34 52 33 27 25 51 21 28 39 25 20 31 30 27 31 31 52 47 36 22 28 52 35 33 34 32 52 47 40 33 35 52 45 45 30 7 51 9 25 30 18 31 30 31 28 33 40 41 40 41 33 29 29 36 31 26 25 19 30 19 22 13 32 30 10 38 26 14 38 17 18 40 23 21 32 32 38 28 29 13 29 33 46 31 41 14 22 43 31 33 16 41 37 39 16 9 27 26 31 27 23 17 25 16 28 11 21 26 26 36 18 11 27 19 11 37 30 39 21 26 22 26 29 26 26 14 12 25 12 9 13 9 29 21 24 22 33 25 23 20 31 14 19 33 25 19 11 20 29 31 31 24 31 11 11 15 20 6 4 4 6	Open. Hide. 59 36 62 62 62 27 23 18 27 23 23 27 28 28 28 23 27 23 59 49 49 59 59 62 59 59 59 59 62 62 62 62 62 59 59 62 59 59 62 62 62 62 59 62 62 62 59 62 62 62 62 51 50 43 46 43 46 43 34 34 36 39 43 59 54 62 62 62 59 59 62 62 62 62 62 62 62 62 59 59 62 62 62 54 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 59 62 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 54 62 62 62 49 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 36 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 10 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_47804517_47805480
seq2: B6Ng01-223A16.b_47_1008

seq1  GAATTCCAGACCAGTCTGGGCTACAAAGCAAGGTCCAGAACAACCAGGGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGACCAGTCTGGGCTACAAAGCAAGGTCCAGAACAACCAGGGG  50

seq1  AGTTACAGAGGAACCCTGTCTTAAAAAACCATCAAACAAAACAACCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTACAGAGGAACCCTGTCTTAAAAAACCATCAAACAAAACAACCTCCT  100

seq1  GTCCCCAAGTAATGAATTCTGTTCTTGCTGTTTCTTAAACATTTAGGAGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCCAAGTAATGAATTCTGTTCTTGCTGTTTCTTAAACATTTAGGAGT  150

seq1  GGAACATTAATTTATTAATGGTCACATGTGAAGGCTTGACGTTTTCTGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACATTAATTTATTAATGGTCACATGTGAAGGCTTGACGTTTTCTGGT  200

seq1  ATTTATGGCTTAAGTTGTGTGGACTTTTAGCTATCATAGCACTCTTTTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTATGGCTTAAGTTGTGTGGACTTTTAGCTATCATAGCACTCTTTTAA  250

seq1  AAATCCGTGCTTTTGGGAAAGGTAAGGGATAAAAGCTTGTGAGACATTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCCGTGCTTTTGGGAAAGGTAAGGGATAAAAGCTTGTGAGACATTGC  300

seq1  TTTAAGTCAATTAGGGAATGACGAATATGCTTGACTAAATGTTCCTTTGG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAGTCAATTAGGGAATGACGAATATGCTTGACTAAATGTTCCTTTGG  350

seq1  TGTTTTGCATGATTCTAGCTGCCTCTCATACATTATCATTGAATTTCCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTGCATGATTCTAGCTGCCTCTCATACATTATCATTGAATTTCCCT  400

seq1  GTCTCTAGGAGGTGAATATTGTTCTCATTTACCAAGCCATCGAACTGAGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCTAGGAGGTGAATATTGTTCTCATTTACCAAGCCATCGAACTGAGG  450

seq1  TCCACGGCCACACTACACTCCATTGCACAAAACAAAAACAAACCAAAGAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCACGGCCACACTACACTCCATTGCACAAAACAAAAACAAACCAAAGAA  500

seq1  GAAACCGTGGTGCCAGGACTCTAATCTAGGCAATTGCAACATCTGCAGAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACCGTGGTGCCAGGACTCTAATCTAGGCAATTGCAACATCTGCAGAT  550

seq1  CTAATCACCTCATTAAGTTCCTTTAGGTTCTGTATTTATTAACTGACCGC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATCACCTCATTAAGTTCCTTTAGGTTCTGTATTTATTAACTGACCGC  600

seq1  CTAGGAGTCTAATCAGTTCTTTCGGGTTACTTTAAAGCCACTATTAGCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGGAGTCTAATCAGTTCTTTCGGGTTACTTTAAAGCCACTATTAGCAG  650

seq1  ATATTCGGAAAGAGAGCTGTCCCTTATTACAAACTTCCCAGTGACTCACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCGGAAAGAGAGCTGTCCCTTATTACAAACTTCCCAGTGACTCACA  700

seq1  AGTTAGCTCAACTTCTCTACACCCACGGCTCCACCCAAGCTAGTTCATTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTAGCTCAACTTCTCTACACCCACGGCTCCACCCAAGCTAGTTCATTT  750

seq1  TGCTGTTGCATAGCAACAGAACATCCTGAACACTAGAAGGCCGTGCAGCC  800
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TGCTGTTGCATAGCAACAGAACATCCTGAACACTAGAAAGCCGTGCAGCC  800

seq1  TCCCAGAGTCTAGCAAGGGGCCTCCTGGGGGCCCCCAGAGCCTAGCAAGG  850
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  TCCCAGAGTCTAGCAAGGGGCCTCCTGGGGG-CCCCAGAGCCTAGCAAGG  849

seq1  GGGCATCCCGGGAGTCGAGCCAGGGTCTAGCAAGGGGCCTCCCGGGGGCC  900
      |||||||||||||||||||||||||||||||||||||||||| |||| ||
seq2  GGGCATCCCGGGAGTCGAGCCAGGGTCTAGCAAGGGGCCTCCGGGGGTCC  899

seq1  CCCCAGAGTCTAGCAAGGGGCACCCCCAGGAGTCGAGCCAGGGTCTAGCA  950
      ||||||||||||| |||||||| ||||||||||||||||| |||||||||
seq2  CCCCAGAGTCTAGTAAGGGGCA-CCCCAGGAGTCGAGCCA-GGTCTAGCA  947

seq1  AGGGGCC-TCGGGGG  964
      ||||||| |||||||
seq2  AGGGGCCTTCGGGGG  962

seq1: chr19_47959668_47960089
seq2: B6Ng01-223A16.g_71_491 (reverse)

seq1  CGCCCCCCCCCCCCAAATAGAAGTGCCCTTTGAAAATCAGGTTTCCAAAG  50
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CG-CCCCCCCCCCCAAATAGAAGTGCCCTTTGAAAATCAGGTTTCCAAAG  49

seq1  CAACCCACGTGTTACTCTTCATATAAACAAAGTAGCAGCCACGTATCACA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCCACGTGTTACTCTTCATATAAACAAAGTAGCAGCCACGTATCACA  99

seq1  CACCAGTGCCACACTCTAAGCATGTTTAAAGTGTGGCAGGGATATTTAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAGTGCCACACTCTAAGCATGTTTAAAGTGTGGCAGGGATATTTAAA  149

seq1  GCTCAGAGGTGACACTGGCCACGTGCAGTGCTTCTGACTCGGACACCAGC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAGAGGTGACACTGGCCACGTGCAGTGCTTCTGACTCGGACACCAGC  199

seq1  CAGCCACATCAGGCATGCCTGGCATCTCTAGGGTTTGGAAAGTAGCTCTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCCACATCAGGCATGCCTGGCATCTCTAGGGTTTGGAAAGTAGCTCTT  249

seq1  TGGATTAGACACAAGACTGGGTGGCAAGACATACAGGTAACTTATAAGCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATTAGACACAAGACTGGGTGGCAAGACATACAGGTAACTTATAAGCC  299

seq1  CACCTCCTTCCACGGCAGGGTGGAGAGCCCCAGATTAGTAAGACTCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTCCTTCCACGGCAGGGTGGAGAGCCCCAGATTAGTAAGACTCTAAC  349

seq1  AAGTGTCCTGGCCGCCAGCCTACCAGCTGTCTGACCTTAGTGGGTCGTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTGTCCTGGCCGCCAGCCTACCAGCTGTCTGACCTTAGTGGGTCGTCT  399

seq1  GCCAGACCCTAGACTGGAATTC  422
      ||||||||||||||||||||||
seq2  GCCAGACCCTAGACTGGAATTC  421

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information