BAC Information

Click to search

BAC

Clone NameB6Ng01-232G09
Chromosome19 (Build37)
Map Location 12,274,254 - 12,275,093
singlet/doubletsinglet
Overlap genenone
Upstream geneMs4a12, Ms4a1, Ms4a5, Gm1276, Ms4a7, Ms4a4a, LOC435588, Ms4a4c, LOC433221, Ms4a4b, Ms4a6c, EG666926, Ms4a6b, Ms4a4d, LOC100040454, Ms4a6d, Ms4a2, Ms4a3, Plac1l, Oosp1, Gm97, Gif, EG666958, Mrpl16, Stx3, Olfr1417, Olfr1418, Olfr1419, EG622845, EG666985, Olfr1420, AV312086, Osbp, GA_x5J8B7W6KF8-6942124-6941700, Olfr1422-ps1, Olfr1423, Olfr1424, Olfr1425, Olfr1426, Olfr1427, Olfr1428, Olfr76, Olfr1555-ps1, Olfr1430-ps1
Downstream geneOlfr1431, Olfr1429-ps1, Olfr262, Olfr232, Olfr1433, Olfr1435-ps1, Olfr1436, Olfr1437, Olfr1438-ps1, Olfr1439-ps1, Olfr1440, Olfr1441, Pfpl, Mpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-232G09.bB6Ng01-232G09.g
ACCGA044747GA044748
length8531,189
definitionB6Ng01-232G09.b B6Ng01-232G09.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttatgaaggatcggacttagcaaatgttagaaagatttctaaat
gacatgtgtacattccattagtagacagaaggtctgatgtataatatgaa
tttaaaggttttataattttttcttcttttcagagaacctttatgtctta
tgtctcttattgctgtttaatagatggaaaaactgtggtttggagaaatg
tatacaaggacaaaaatcaataagtagccaagacagaaatccaccaccaa
aacttgtaaaatttgcatttaattgtgtatatgtgtgtgtgagtgtgtgt
gtctgtgttggagagagagggctgactttgggttttagttctctctgtat
accatgtgagcccagaagctaatatcataagcttgatacaagtacctgtc
actgaatgaagaatcttgccagttagtcctgaacacatattttattttat
gatgccaatacccaagcttgtgatcaggaatgcttttcctgaatttcagt
ttcttttcataacttgatggataccttgctgccttgatttcttcacttat
ggatactaaacacagcaggtctattagagctgctgtattgattgattcac
aatagacctttgagaaactgtgtatgcatattttatataaaatcaaataa
tttctatgttttatacatattcatttattgatatcaaagttatatttatc
agttcattctatcttggataaatccccttaatatctctgatttccaagtt
ttatcttcctacgaactgagttttgggggaatagcagacaccttattttc
cttttgcacaccagtgcctccaaagtcaaggcatgttatgatcttgttgt
cat
gaattctcacctgaggataaccgcatggctgagaaacacttgaaaaaatg
ttcagcatccttaaacatcagggaaatgcaaatcaaaacaaccttgagat
tccatctcacaccagtcagaatgactaagatcaaaaattcaggtgacagc
agatgctggcaaggacgtggagaaagaggaacacttctccattgttggtg
ggattgcaagcttttacaaccactctggtaatcagtctggcggttcctca
gaaaattagacatagtactaccggaggatcctgcaatacctctcctgggc
atatatccagaagattttccaactagtaagaaatacaaatgttccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacaaaggattggatacaaaaaatgtggtacatttacacaatt
gagtactgctcagctattaaaagaataaatttatgaaattcctaggcaaa
tggttggacctgaatggcattatcctgagtgaggtaacccaatcacaaaa
gatctcaaatgatatgtactcactaagtggatattagcccagaaacttag
gatacccaagatataaggtacaatttgctaaacacattaaactcaagaga
atgaagaccaaagtgtggacactttgccccttcttagaataggaaacaaa
acaccccatggaaggaattacagagacaaaatttggaagtgtgtcgaaag
gattgaccatctagtgattgccatatccagagatccgtcccatgatcagc
ttccaaacgctgacaccattgcatacactagcatgattttgctgaaagga
cccagatatagctgtctcttgtgagactatgccagggcctagcaaacaca
gaagtggatgctcacagtcagctattgaatggaccacagggcccccaatg
gcggaactagagaaagcaccccacagaactaaagggaactgcaaccctat
agggtggaacaaccattattgaactaagcagtacctggagcttcttgttc
ctctagctgcatatatgtattcaaaaagaatggcctagtcggccatcacc
tgcaaggagaggtcccattgtacttccaacctttatctgccccagttaca
ggtcaaccgcccaggccaaaagcagacttgcttgtcaag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_12274254_12275093
seq2: B6Ng01-232G09.b_42_894

seq1  GAATTCTTATGAAGGATCGGACTTAGCAAATGTTAGAAAGATTTCTAAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTATGAAGGATCGGACTTAGCAAATGTTAGAAAGATTTCTAAAT  50

seq1  GACATGTGTACATTCCATTAGTAGACAGAAGGTCTGATGTATAATATGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACATGTGTACATTCCATTAGTAGACAGAAGGTCTGATGTATAATATGAA  100

seq1  TTTAAAGGTTTTATAATTTTTTCTTCTTTTCAGAGAACCTTTATGTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAGGTTTTATAATTTTTTCTTCTTTTCAGAGAACCTTTATGTCTTA  150

seq1  TGTCTCTTATTGCTGTTTAATAGATGGAAAAACTGTGGTTTGGAGAAATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTCTTATTGCTGTTTAATAGATGGAAAAACTGTGGTTTGGAGAAATG  200

seq1  TATACAAGGACAAAAATCAATAAGTAGCCAAGACAGAAATCCACCACCAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACAAGGACAAAAATCAATAAGTAGCCAAGACAGAAATCCACCACCAA  250

seq1  AACTTGTAAAATTTGCATTTAATTGTGTATATGTGTGTGTGAGTGTGTGT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTGTAAAATTTGCATTTAATTGTGTATATGTGTGTGTGAGTGTGTGT  300

seq1  GTCTGTGTTGGAGAGAGAGGGCTGACTTTGGGTTTTAGTTCTCTCTGTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTGTGTTGGAGAGAGAGGGCTGACTTTGGGTTTTAGTTCTCTCTGTAT  350

seq1  ACCATGTGAGCCCAGAAGCTAATATCATAAGCTTGATACAAGTACCTGTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCATGTGAGCCCAGAAGCTAATATCATAAGCTTGATACAAGTACCTGTC  400

seq1  ACTGAATGAAGAATCTTGCCAGTTAGTCCTGAACACATATTTTATTTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAATGAAGAATCTTGCCAGTTAGTCCTGAACACATATTTTATTTTAT  450

seq1  GATGCCAATACCCAAGCTTGTGATCAGGAATGCTTTTCCTGAATTTCAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCAATACCCAAGCTTGTGATCAGGAATGCTTTTCCTGAATTTCAGT  500

seq1  TTCTTTTCATAACTTGATGGATACCTTGCTGCCTTGATTTCTTCACTTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTCATAACTTGATGGATACCTTGCTGCCTTGATTTCTTCACTTAT  550

seq1  GGATACTAAACACAGCAGGTCTATTAGAGCTGCTGTATTGATTGATTCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATACTAAACACAGCAGGTCTATTAGAGCTGCTGTATTGATTGATTCAC  600

seq1  AATAGACCTTTGAGAAACTGTGTATGCATA-TTTATATAAAATCAAATAA  649
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AATAGACCTTTGAGAAACTGTGTATGCATATTTTATATAAAATCAAATAA  650

seq1  TTTCTATGTTTTATACATATTCATTTATTGATATC-AAGTTATA-TTATC  697
      ||||||||||||||||||||||||||||||||||| |||||||| |||||
seq2  TTTCTATGTTTTATACATATTCATTTATTGATATCAAAGTTATATTTATC  700

seq1  AGTTCATTCTATCTTGGAGAAAT-CCCTTAACATCTCTGA-TTCCAAG-T  744
      |||||||||||||||||| |||| ||||||| |||||||| ||||||| |
seq2  AGTTCATTCTATCTTGGATAAATCCCCTTAATATCTCTGATTTCCAAGTT  750

seq1  TTATC-TCCTAGGAATTGAGTTTT-GGGGAATAGCAGACACC-TATTT--  789
      ||||| ||||| ||| |||||||| ||||||||||||||||| |||||  
seq2  TTATCTTCCTACGAACTGAGTTTTGGGGGAATAGCAGACACCTTATTTTC  800

seq1  CCTTTGCAGACCAGTGCCTCCAAGGTC-AGGCATGTTATGATC-TGGTGT  837
      | |||||| |||||||||||||| ||| ||||||||||||||| || |||
seq2  CTTTTGCACACCAGTGCCTCCAAAGTCAAGGCATGTTATGATCTTGTTGT  850

seq1  CAT  840
      |||
seq2  CAT  853