BAC Information

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BAC

Clone NameB6Ng01-238K08
Chromosome19 (Build37)
Map Location 15,669,216 - 15,670,222
singlet/doubletsinglet
Overlap genenone
Upstream geneTle4, EG433225, EG635497, Pomc-ps1
Downstream geneLOC667482, Psat1, LOC100041424, Cep78, LOC100042048, Gnaq, E030024N20Rik, LOC624438, Gna14, LOC666665
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-238K08.bB6Ng01-238K08.g
ACCGA049285GA049286
length1,1761,016
definitionB6Ng01-238K08.b B6Ng01-238K08.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccaaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgtggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaggcttgtacaaccactctggaaatcagtctgacagttcctca
gaaaattggacatagtactaccggaggatccagcaatacctcttctcggc
atatatccagaagatgccccaactggtaagaaggacacatgctccactat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatctacacaatg
gagtactactcagctattaaaaagaatgaatttatgaaattcctagccaa
atggatggacctggagggcatcatcctgagtgaggtaacacattcacaaa
ggaactcacacaatatgtactcactgataagtggatattagcccaaaatc
taggattcccaagatataagatacaatttgctaaacacatgaaactcaag
aagaatgaagactgaagtgtggacactatgcccctccttagaattgggaa
caaaacacccatggaaggagttacagagacaaagtttggagctgagatga
aaggatggaccatgtagaaactgccatatccagggattcaccccataatc
agcatccaaacgctgacaccattgcatacactagcaagattttatcgaaa
ggacccagatgtagctgtctcctgtgagactatgcccgggccctagcaaa
cacagaagtggatgctcacagtcagctaatgggatggatccacagtgctc
ccaatggaggagctagagaaagaacccaaggagctaaagggactgcaacc
ctatagtggaacaccattatgaactaccagtaccccagagctctgacctc
tagcctgcatatgttatcaaaaggatgcctagtcgcccatccactggaga
gagaggccatgggaccacgcaacctttatatgcccagtcaaggtatgcag
gccaaatggggaagtgtggcgtgggt
gaattcagtgtgtgtgtatgtgtgtgtgtgtgtgtgtgtgtgtgagagag
agagagagagagagagagagagagagagagaaagagagagagagagagag
agagagagagagagagagagctggtgtccaactctataacctttatttgt
gcccaagactttagccaatgaggggaaagcagaagacagactttgaggaa
tttagttaattttagtgaacttgaatagggctgaggaaaaatatctcaag
ccattagatggaaaaatttagaaaactttaagctgaggtgtggttaactt
taaacccataccttggttttagaagattttctaataaagaattctgagaa
atctatgctatgccccatgtgaagggcaataatgcttgtcagtttgacag
ggtctagagtcatctaggagacaagcctgggcatcgccatgcaaacttat
ttaggttatgttgaaattgaaaaactcattctaaatttgggtgtcaaaat
ttcatggggcaagatcccttcaagaaagtgagctgagtaacatttgtcac
tccatgatacttgactacagaattaggagaactagatgctgggaaggcca
ttctccactacatgtcagctagagatgtgggtccatcagtggcccataaa
taagcactctgctttcttccatgatctttagagtattggccatctttaga
aatccaggatagcatgtttgtttcaattgttattgcctttaaccatcgtc
ttttaaaacttagggactttggtcaacattattcctgagacgtgcaagtt
ttgtctgagtgtcacatgtccaagcttgtagccatttttgggtctcctct
tcttctattctccatgctggcattagatggattttgaagatcttgctttt
gtatcttggactcttgaaaatcaccaggattcatcctctagttctgcact
gctcctcattcttctgttcttcttcaccaccttaacgctcgctcactttt
cactaatatcaacgtc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_15669216_15670222
seq2: B6Ng01-238K08.g_68_1083 (reverse)

seq1  GACG-TGATATTAGTGAAAAGTG-GAGAGCG-TAAGGTGGTG-AGGAGAA  46
      |||| |||||||||||||||||| | ||||| |||||||||| || ||||
seq2  GACGTTGATATTAGTGAAAAGTGAGCGAGCGTTAAGGTGGTGAAGAAGAA  50

seq1  CAG-AGGATGA-GAGCAGTGCAGGACTAGA-GATGAATCCTGGTGATTTT  93
      ||| || |||| ||||||||||| |||||| |||||||||||||||||||
seq2  CAGAAGAATGAGGAGCAGTGCAGAACTAGAGGATGAATCCTGGTGATTTT  100

seq1  C-AGAGTCCAAGATACAAAGCAAAGATC-TCAAAAATCATCTATTGCCAG  141
      | |||||||||||||||||   |||||| ||||||  |||||| ||||| 
seq2  CAAGAGTCCAAGATACAAAAGCAAGATCTTCAAAATCCATCTAATGCCA-  149

seq1  GCATGGAGAATAGAAGAAGA-GAGACCCAAAAATGGCTACAAAGCTTGGA  190
      |||||||||||||||||||| ||||||||||||||||||| |||||||||
seq2  GCATGGAGAATAGAAGAAGAGGAGACCCAAAAATGGCTAC-AAGCTTGGA  198

seq1  CATGTTGACACTCAGACAAAACTTGCACGTCTCAGGAATAATGTTGACCA  240
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  CATG-TGACACTCAGACAAAACTTGCACGTCTCAGGAATAATGTTGACCA  247

seq1  AAGTCCCCTAAGTTTTAAAAGACGATGGTT-AAGGCAATAACAATTGAAA  289
      |||| ||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAGT-CCCTAAGTTTTAAAAGACGATGGTTAAAGGCAATAACAATTGAAA  296

seq1  CAAACATGCTATCCTGGATTTCTAAAGATGGCCAATACTCT-AAGATCAT  338
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CAAACATGCTATCCTGGATTTCTAAAGATGGCCAATACTCTAAAGATCAT  346

seq1  GGAAGAAAGCAGAGTGCTTATTTAT-GGCCACTGATGGACCCACATCTCT  387
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  GGAAGAAAGCAGAGTGCTTATTTATGGGCCACTGATGGACCCACATCTCT  396

seq1  AGCTGACATGTAGTGGAGAATGGCCTTCCCAGCATCTAGTTCTCCTAATT  437
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGACATGTAGTGGAGAATGGCCTTCCCAGCATCTAGTTCTCCTAATT  446

seq1  CTGTAGTCAAGTATCATGGAGTGACAAATGTTACTCAGCTCACTTTCTTG  487
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTAGTCAAGTATCATGGAGTGACAAATGTTACTCAGCTCACTTTCTTG  496

seq1  AAGGGATCTTGCCCCATGAAATTTTGACACCCAAATTTAGAATGAGTTTT  537
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGGATCTTGCCCCATGAAATTTTGACACCCAAATTTAGAATGAGTTTT  546

seq1  TCAATTTCAACATAACCTAAATAAGTTTGCATGGCGATGCCCAGGCTTGT  587
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATTTCAACATAACCTAAATAAGTTTGCATGGCGATGCCCAGGCTTGT  596

seq1  CTCCTAGATGACTCTAGACCCTGTCAAACTGACAAGCATTATTGCCCTTC  637
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTAGATGACTCTAGACCCTGTCAAACTGACAAGCATTATTGCCCTTC  646

seq1  ACATGGGGCATAGCATAGATTTCTCAGAATTCTTTATTAGAAAATCTTCT  687
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGGGGCATAGCATAGATTTCTCAGAATTCTTTATTAGAAAATCTTCT  696

seq1  AAAACCAAGGTATGGGTTTAAAGTTAACCACACCTCAGCTTAAAGTTTTC  737
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCAAGGTATGGGTTTAAAGTTAACCACACCTCAGCTTAAAGTTTTC  746

seq1  TAAATTTTTCCATCTAATGGCTTGAGATATTTTTCCTCAGCCCTATTCAA  787
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTTTTCCATCTAATGGCTTGAGATATTTTTCCTCAGCCCTATTCAA  796

seq1  GTTCACTAAAATTAACTAAATTCCTCAAAGTCTGTCTTCTGCTTTCCCCT  837
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCACTAAAATTAACTAAATTCCTCAAAGTCTGTCTTCTGCTTTCCCCT  846

seq1  CATTGGCTAAAGTCTTGGGCACAAATAAAGGTTATAGAGTTGGACACCAG  887
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGCTAAAGTCTTGGGCACAAATAAAGGTTATAGAGTTGGACACCAG  896

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT  937
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTCTCTCTCT  946

seq1  CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACA  987
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTCTCTCTCTCTCTCTCTCTCTCACACACACACACACACACACACA  996

seq1  CATACACACACACTGAATTC  1007
      ||||||||||||||||||||
seq2  CATACACACACACTGAATTC  1016