MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-247E21
Chromosome	3 (Build37)	19 (Build37)
Map Location	131,630,782 - 131,630,997	35,230,108 - 35,230,245
singlet/doublet	singlet	singlet
Overlap gene	none
Upstream gene	LOC545568, Lef1, 6720418B01Rik, Hadh, Cyp2u1, Sgms2, LOC100043443, Papss1, Olfr375-ps1
Downstream gene	Dkk2, LOC100039018, EG433653, LOC668857, Scye1, A630047E20Rik, LOC668858, Npnt
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC545568 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:545568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 798 ESTs, 19 Proteins pseudo : _no_value

name	Lef1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16842 MGI:96770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	6720418B01Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:77892 MGI:1925142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs

name	Hadh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:15107 MGI:96009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cyp2u1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:71519 MGI:1918769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sgms2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74442 MGI:1921692
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043443 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins

name	Papss1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:23971 MGI:1330587
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Olfr375-ps1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:257879 MGI:3030209
definition	gene_synonym : MOR203-8P note : olfactory receptor 375, pseudogene 1 pseudo : _no_value

name	Dkk2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56811 MGI:1890663
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100039018 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100039018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins

name	EG433653 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:433653 MGI:3647547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins

name	LOC668857 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668857
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	Scye1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13722 MGI:102774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	A630047E20Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:271981 MGI:2445052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668858 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins pseudo : _no_value

name	Npnt (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:114249 MGI:2148811
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Lef1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130133 GeneID:16842 MGI:96770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : lymphoid enhancer binding factor 1 transcript_id : NM_010703.3

name	6720418B01Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369865 GeneID:77892 MGI:1925142
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 5 ESTs product : RIKEN cDNA 6720418B01 gene transcript_id : XM_001005301.1

name	Hadh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142347244 GeneID:15107 MGI:96009
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : hydroxyacyl-Coenzyme A dehydrogenase transcript_id : NM_008212.3

name	Cyp2u1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142376731 GeneID:71519 MGI:1918769
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : cytochrome P450, family 2, subfamily u, polypeptide 1 transcript_id : NM_027816.2

name	Sgms2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142349264 GeneID:74442 MGI:1921692
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : sphingomyelin synthase 2 transcript_id : NM_028943.2

name	LOC100043443 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251404 GeneID:100043443
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins product : similar to CG2839-PA transcript_id : XM_001480175.1

name	Papss1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:6754981 GeneID:23971 MGI:1330587
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : 3'-phosphoadenosine 5'-phosphosulfate synthase 1 transcript_id : NM_011863.1

name	Dkk2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:66955883 GeneID:56811 MGI:1890663
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : dickkopf homolog 2 (Xenopus laevis) transcript_id : NM_020265.3

name	LOC100039018 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149251934 GeneID:100039018
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001472097.1

name	EG433653 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94369925 GeneID:433653 MGI:3647547
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 2 Proteins product : predicted gene, EG433653 transcript_id : XM_485313.3

name	Scye1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:126012516 GeneID:13722 MGI:102774
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : small inducible cytokine subfamily E, member 1 transcript_id : NM_007926.2

name	A630047E20Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801858 GeneID:271981 MGI:2445052
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA A630047E20 gene transcript_id : NM_173032.2

name	Npnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:71067127 GeneID:114249 MGI:2148811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronectin transcript_id : NM_001029836.1

name	Npnt (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:73088939 GeneID:114249 MGI:2148811
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : nephronectin transcript_id : NM_033525.2

name	Lef1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27735019 CCDS:CCDS17842.1 GeneID:16842 MGI:96770
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA]; GO:0005667 - transcription factor complex [Evidence IPI] GO_function : GO:0003682 - chromatin binding [Evidence IDA]; GO:0008301 - DNA bending activity [Evidence IDA]; GO:0003677 - DNA binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003705 - RNA polymerase II transcription factor activity, enhancer binding [Evidence IGI]; GO:0003700 - transcription factor activity [Evidence IDA] GO_process : GO:0048468 - cell development [Evidence IGI]; GO:0030879 - mammary gland development [Evidence IMP]; GO:0042475 - odontogenesis (sensu Vertebrata) [Evidence IMP]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006357 - regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0001756 - somitogenesis [Evidence IMP]; GO:0006350 - transcription [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IMP] [Evidence IEA] codon_start : 1 note : lymphoid enhancer factor 1 product : lymphoid enhancer binding factor 1 protein_id : NP_034833.2

name	6720418B01Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369866 GeneID:77892 MGI:1925142
definition	codon_start : 1 product : hypothetical protein LOC77892 protein_id : XP_001005301.1

name	Hadh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:111038118 GeneID:15107 MGI:96009
definition	GO_component : GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0003857 - 3-hydroxyacyl-CoA dehydrogenase activity [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA] GO_process : GO:0006631 - fatty acid metabolism [Evidence IEA]; GO:0006629 - lipid metabolism [Evidence IEA] codon_start : 1 note : hydroxylacyl-Coenzyme A dehydrogenase-dehydrogenase; L-3-hydroxyacyl-Coenzyme A dehydrogenase, short chain product : L-3-hydroxyacyl-Coenzyme A dehydrogenase protein_id : NP_032238.2

name	Cyp2u1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625845 GeneID:71519 MGI:1918769
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0020037 - heme binding [Evidence IEA]; GO:0005506 - iron ion binding [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0016491 - oxidoreductase activity [Evidence IEA]; GO:0016712 - oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, reduced flavin or flavoprotein as one donor, and incorporation of one atom of oxygen [Evidence IEA] codon_start : 1 note : cytochrome P450, 2u1 product : cytochrome P450, family 2, subfamily u, polypeptide 1 protein_id : NP_082092.1

name	Sgms2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27229211 CCDS:CCDS17843.1 GeneID:74442 MGI:1921692
definition	GO_component : GO:0005794 - Golgi apparatus [Evidence ISS]; GO:0030173 - integral to Golgi membrane [Evidence ISS]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0005887 - integral to plasma membrane [Evidence ISS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0047493 - ceramide cholinephosphotransferase activity [Evidence ISS]; GO:0016301 - kinase activity [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0006629 - lipid metabolism [Evidence IEA]; GO:0006665 - sphingolipid metabolism [Evidence IEA]; GO:0006686 - sphingomyelin biosynthesis [Evidence ISS] codon_start : 1 product : sphingomyelin synthase 2 protein_id : NP_083219.2

name	LOC100043443 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251405 GeneID:100043443
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480225.1

name	Papss1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754982 GeneID:23971 MGI:1330587
definition	GO_component : GO:0005622 - intracellular [Evidence ISS]; GO:0009336 - sulfate adenylyltransferase complex (ATP) [Evidence IC] GO_function : GO:0004020 - adenylylsulfate kinase activity [Evidence IDA]; GO:0005524 - ATP binding [Evidence IEA] [Evidence ISS]; GO:0003824 - catalytic activity [Evidence IEA]; GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016779 - nucleotidyltransferase activity [Evidence ISS] [Evidence IEA]; GO:0004781 - sulfate adenylyltransferase (ATP) activity [Evidence ISS] [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA]; GO:0016772 - transferase activity, transferring phosphorus-containing groups [Evidence IEA] GO_process : GO:0050428 - 3'-phosphoadenosine 5'-phosphosulfate biosynthesis [Evidence IDA]; GO:0001501 - skeletal development [Evidence ISS]; GO:0000103 - sulfate assimilation [Evidence IEA] codon_start : 1 product : 3'-phosphoadenosine 5'-phosphosulfate synthase 1 protein_id : NP_035993.1

name	Dkk2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560347 CCDS:CCDS17844.1 GeneID:56811 MGI:1890663
definition	GO_component : GO:0005576 - extracellular region [Evidence ISS] [Evidence IEA] GO_process : GO:0007275 - development [Evidence IEA]; GO:0030178 - negative regulation of Wnt receptor signaling pathway [Evidence IEA]; GO:0016055 - Wnt receptor signaling pathway [Evidence IEA] codon_start : 1 note : mRNA for dickkopf-2 (dkk-2 gene); dickkopf 2; dickkopf homolog 1 product : dickkopf homolog 2 protein_id : NP_064661.2

name	LOC100039018 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149251935 GeneID:100039018
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001472147.1

name	EG433653 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94369926 GeneID:433653 MGI:3647547
definition	codon_start : 1 product : similar to hCG2036814 protein_id : XP_485313.2

name	Scye1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:126012517 GeneID:13722 MGI:102774
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0005615 - extracellular space [Evidence IEA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0005125 - cytokine activity [Evidence IEA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0003918 - DNA topoisomerase (ATP-hydrolyzing) activity [Evidence IEA]; GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA]; GO:0000049 - tRNA binding [Evidence IEA] GO_process : GO:0006265 - DNA topological change [Evidence IEA]; GO:0006412 - protein biosynthesis [Evidence IEA] codon_start : 1 note : endothelial monocyte activating polypeptide 2 product : small inducible cytokine subfamily E, member 1 protein_id : NP_031952.2

name	A630047E20Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27370550 GeneID:271981 MGI:2445052
definition	GO_function : GO:0016301 - kinase activity [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 product : hypothetical protein LOC271981 protein_id : NP_766620.1

name	Npnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:71067128 CCDS:CCDS17845.1 GeneID:114249 MGI:2148811
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IPI] [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IPI] GO_process : GO:0007160 - cell-matrix adhesion [Evidence IPI] [Evidence IDA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : nephronectin isoform b protein_id : NP_001025007.1

name	Npnt (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:73088940 CCDS:CCDS17846.1 GeneID:114249 MGI:2148811
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IPI] [Evidence IDA] GO_function : GO:0005178 - integrin binding [Evidence IPI] GO_process : GO:0007160 - cell-matrix adhesion [Evidence IPI] [Evidence IDA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : nephronectin isoform a protein_id : NP_277060.2

name	LOC668857 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:668857
definition	number : 1 pseudo : _no_value

name	LOC545568 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251403 GeneID:545568
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 13 mRNAs, 798 ESTs, 19 Proteins product : similar to Eno1 protein pseudo : _no_value transcript_id : XR_034564.1

name	LOC668858 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149251936 GeneID:668858
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 ESTs, 5 Proteins product : similar to heat-shock protein hsp84 pseudo : _no_value transcript_id : XR_030605.1

clone name	MSMg01-070I15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-394B18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-064J11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-419A05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-138J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-448F20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-399B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-463K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-132H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-059L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-291P10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-120A10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540M18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-214E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-143P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384P21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-527O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-375H12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-508O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-180F12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347J03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-138J05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-201L22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-480D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462B02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-263J09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372M11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-062I22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-532N06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438K23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-294H07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353M09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492C01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-112G19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269K16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-544L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-312D19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-542L05
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-348B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-466O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260A06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-196M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280I24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-483N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412A18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299K05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-100H01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-531D12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-156I12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-082G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262H03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548H08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052M19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-171G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-395O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402B19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-166H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-095E12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-081I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-082B12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-126G21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183G13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191F12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-369I01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-439O07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-544I08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-447P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-522M07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-234B11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-333E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-460A13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-269G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318I10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-407I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-289G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-050O10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-352F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-517O16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-159B16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-336K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074F04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282L15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-120A05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-261J05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-212B06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-299G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-073E14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-052C09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-117A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-061E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334C21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-217A01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-226M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159L24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235I24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-274D04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-092G23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015D11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-019B18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-264J16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105B06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-163K19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-348P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-053A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-106J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-260F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-340N24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-062O18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217G11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143O08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-098C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-287L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-068K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-267D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-284H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-295M01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-247E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-050D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-127G14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-132O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-288J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004E05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-004G01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334J19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-068P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-108K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-246N16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-292C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-035A21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-349P17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-296L21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-165H08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-048D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-235L13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-246J04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333O06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-329B24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115F07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-272E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237C15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-074A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-300M12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-104K08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-052O22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-309N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-296E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027C07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-307I21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-136M23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-131D23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-273D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109E16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-027K17
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-247E21.b	B6Ng01-247E21.g
ACC	GA055673	GA055674
length	216	444
definition	B6Ng01-247E21.b	B6Ng01-247E21.g
singlet/doublet	singlet	singlet
BLAST hit	unique	unique
Map location.	(131,630,782 - 131,630,997)	(35,230,108 - 35,230,245)
sequence	aaacccttattcactcattagtcaccccaaacatggaagcaccagatatg aggtaaactgtgggcatggcatcgggtgtacagtccacgcgaagccctca gagtaagagagagacagattgtagctattaatcacagggttgtgtaaatt gagatggaggctgggaagcgaggagtgggttgggggattgcgggtggggt cgagagtgggatggga	tagaattatagaggaataacattttagcccatggtgactttttttattcc ttaaatttgtacttcaaggacatttctttttcttgggagtcctaaaacag cttgccgtctgtgaaatttgccatcaactttatatattataatatatatg tatatatatatatatatatatatatatatgtgtgtgtgtgtatatatata tatatagggatatatatcgcgggggggggggggggtacgcgcaagagaga gagagagagagatagggagagaaagaaaaagaaatagagatagagagaga gagagagagtgcgatatctatctatttctatatatgtgtatatctataga tatattcctatctatacacgggggggggcgggcgcgcgccccacccccta caccgctcgcccggcacatacacatatatatagatatatatata
quality values	Open. Hide. 14 62 62 62 62 62 62 62 51 47 62 38 32 62 62 47 44 62 62 62 62 62 59 59 62 62 62 59 43 38 38 28 56 59 62 62 54 62 62 62 62 59 62 59 62 59 62 62 59 62 62 62 59 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 59 59 59 59 62 62 62 42 62 62 62 62 62 59 59 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 54 54 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 38 54 62 62 62 62 62 62 62 59 59 62 62 62 62 62 33 35 62 45 25 11	Open. Hide. 62 59 62 59 49 49 40 28 48 29 27 54 48 49 54 59 59 62 62 62 62 62 62 62 59 59 62 62 62 59 59 62 62 62 59 62 59 59 62 62 62 62 62 62 59 62 62 62 62 54 54 54 43 54 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 51 51 32 32 32 32 48 48 34 35 15 26 13 13 5 5 10 13 13 13 13 18 13 18 12 17 11 13 13 10 11 5 13 10 13 11 17 13 13 10 12 9 13 15 18 24 18 24 18 24 24 13 18 18 24 18 24 11 13 10 13 18 14 15 12 13 13 14 13 18 13 18 19 16 13 18 13 18 13 18 13 13 14 14 15 17 16 18 18 11 13 17 17 17 17 19 13 12 18 13 15 15 13 30 15 18 13 19 13 19 12 24 13 23 12 22 24 24 15 22 24 22 26 25 16 22 22 11 13 11 11 11 13 11 11 10 11 11 16 11 11 16 17 12 14 14 15 10 14 21 21 14 20 14 14 14 14 18 25 14 15 16 21 18 18 11 19 12 25 16 27 15 14 14 20 15 11 15 15 11 13 14 13 12 12 12 12 11 15 11 11 10 10 21 19 19 14 18 10 18 15 14 10 22 12 22 10 17 10 10 10 14 12 15 10 10 14 10 9 8 8 9 9 13 11 20 11 9 14 17 9 9 13 10 8 9 7 8 8 9 8 8 10 13 10 20 15 27 8 27 9 26 10 30 8 22 9 23 14 19 9 8 12 19 18 19 10 6

Alignment Information

BAC End 1

BAC End 2

seq1: chr3_131630782_131630997
seq2: B6Ng01-247E21.b_52_267

seq1  AAACCCTTATTCACTCATTAGTCACCCCAAACATGGAAGCACCAGATATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCCTTATTCACTCATTAGTCACCCCAAACATGGAAGCACCAGATATG  50

seq1  AGGTAAACTGTGGGCATGGCATCGGGTGTACAGTCCACGCGAAGCCCTCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAAACTGTGGGCATGGCATCGGGTGTACAGTCCACGCGAAGCCCTCA  100

seq1  GAGTAAGAGAGAGACAGATTGTAGCTATTAATCACAGGGTTGTGTAAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTAAGAGAGAGACAGATTGTAGCTATTAATCACAGGGTTGTGTAAATT  150

seq1  GAGATGGAGGCTGGGAAGCGAGGAGTGGGTTGGGGGATTGCGGGTGGGGT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGAGGCTGGGAAGCGAGGAGTGGGTTGGGGGATTGCGGGTGGGGT  200

seq1  CGAGAGTGGGATGGGA  216
      ||||||||||||||||
seq2  CGAGAGTGGGATGGGA  216

seq1: chr19_35230108_35230245
seq2: B6Ng01-247E21.g_206_517 (reverse)

seq1  --------------------------------------------------  0
                                                        
seq2  TATATATATATCTATATATATGTGTATGTGCCGGGCGAGCGGTGTAGGGG  50

seq1  --------------------------------------------------  0
                                                        
seq2  GTGGGGCGCGCGCCCGCCCCCCCCCGTGTATAGATAGGAATATATCTATA  100

seq1  --------------------------------------------------  0
                                                        
seq2  GATATACACATATATAGAAATAGATAGATATCGCACTCTCTCTCTCTCTC  150

seq1  --TATATATATATCTATCTCTCTCTCTCTATATATATGTGTGTGTATATA  48
        ||| | ||| ||| | ||| ||||||  ||| | | | | | | | | 
seq2  TCTATCTCTATTTCTTTTTCTTTCTCTCCCTATCTCTCTCTCTCTCTCTC  200

seq1  T--------------------------ATGTATACACATATATACACACA  72
      |                          || ||||  | |||||| | | |
seq2  TTGCGCGTACCCCCCCCCCCCCCCGCGATATATATCCCTATATATATATA  250

seq1  CACACACACACACACACATATATATATATATATATATATATATATATATA  122
       | ||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  TATACACACACACACATATATATATATATATATATATATATATACATATA  300

seq1  TATATATATATATATA  138
      |||   |||| |||||
seq2  TAT---TATA-ATATA  312

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information