BAC Information

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BAC

Clone NameB6Ng01-253P09
Chromosome19 (Build37)
Map Location 13,539,161 - 13,540,304
singlet/doubletsinglet
Overlap genenone
Upstream geneMpeg1, Dtx4, EG625046, 4632417K18Rik, EG240549, Glyat, Olfr1442, Olfr1443, Keg1, Zfp91, Cntf, Lpxn, EG383436, Olfr1444, Olfr1445, Olfr1446, Olfr1447, EG433224, Olfr1448, Olfr1449, Olfr1450, Olfr1451, Olfr1452-ps1, Olfr1453, Olfr1454, Olfr1455-ps1, Olfr1456-ps1, Olfr1457, EG667271, Olfr1459, Olfr1460-ps1, Olfr1461, Olfr1462, Olfr1463, LOC667300, Olfr1465, Olfr1466, Olfr1467, Olfr1468-ps1, Olfr1469, Olfr1470-ps1, Olfr1471, GA_x5J8B7W6KF8-5605544-5605301, Olfr1472, Olfr1473-ps1
Downstream geneOlfr1474, Olfr1475, GA_x5J8B7W6KF8-5563315-5562883, Olfr1477, GA_x5J8B7W6KF8-5546505-5545716, GA_x5J8B7W6KF8-5539992-5539494, LOC100041185, Olfr1480, GA_x5J8B7W6KF8-5515896-5515561, GA_x5J8B7W6KF8-5488050-5488655, Olfr1483-ps1, Olfr1484, GA_x5J8B7W6KF8-5463415-5462623, Olfr1486-ps1, LOC671653, Olfr1487, GA_x5J8B7W6KF8-5425983-5425664, Olfr1489, Olfr1490, Olfr1491, Olfr1492-ps1, Olfr1493-ps1, Olfr1494, Olfr1495, Olfr1496, Olfr1497, Olfr1498-ps1, Olfr1499, Olfr1500, Olfr1501, Olfr1502, Olfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-253P09.bB6Ng01-253P09.g
ACCGA060553GA060554
length1,1931,125
definitionB6Ng01-253P09.b B6Ng01-253P09.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcactatataaacaaattcaggaagaatcaaataatgtcattagat
gcttaaaaaaactctttcaacaaaatacaattgtactttacattggaaag
atcatgaaatcaatcaccatacctaagcataataaaaacaatatacagca
agctaatagtcaacattaaattaaatggaaagaaatttaaagccatccca
caaaaaccaggaacaagaaacggatactcactcttgccctatttattcaa
tatagtattcaaagttctagctaaaaaagttagacaagaaatggatgtca
aagagatacaaattggaaaggaagaagtcaagatgtcactttttgtcgat
gatatgacataatgcataatcaatgcgaagttttccaccagagaactcct
atacctgataaacaagttaattaggtggatatcaagttctctacacaaag
gataaattggctgagaaagaaattaagcaaaccacagatgtcacaatatt
cccaaaaattaaatagtatcttagtgtagttctagcaaagcaactgaaag
tttttatgacaagatatttatggctcttgtttttctttttttattggata
ttttatgcatttacatttcaaatgttatcccctttcatgatttaccctca
agaaaccacctctcccatttcccatcctcctgcttctatgaggatgctcc
tcctccaaccaacacactcccaccttggagccttggcaatcccctactat
gtggaattgagccatcataggaccaaaggattttcttcctactgatgcca
gacaataccatcatctgttacataagtgtttgtatctttgggtccctcca
tgtgaactctttggttggtggtttaatcttggggaactctgggggcactg
gttggttgatattgttgttcttcctatggagttgcaagccctttcatcgc
cttcagtcctttatctaactccttccattggagaccctgtgctaagtcca
atggtttggctacaggcatctactctattatttgtcatgttgtggccaga
acctgtaggagttcttcctgtaaccaagtactatatcttttaagtgcttg
gattttcaagatgtgtaattggtttgtccatgaactaggtggttcctcat
cagggtggctacttggaagagagtttctagatggggcgattat
gaattccacagttgcctgtagttggtatggcattgagcccttctgatatt
tggtatgtctttagcatttgtccttgtttaggtaatatttacatagttgt
gttaagacatttttgagtgtagctcatgattttaaagagaagaaaagagt
tactcctactacttagctatagccatactacagaagatcattttacctga
gaggaaagtagtgtctgttttaaataactaccaaagaaaagtttagaagt
tttcacaattagtgaacattagacatagaaaatgttaatttccacgattt
accacaaatcactagcgtatatccatatgacaatatggcattcctcctca
caagttgatgaaaatgtagttcttacatgctgatacatttggacaagaaa
atgacattgtaaacacttagaagacatccattgttctaaaacagaccttg
tttgatgttttatttaaaaaaccaactagaaggaaagaaaaacaatgctc
ttaccatgtgagaacctaaataccaaaagcacgggctagatgcctgaccc
tgaaattgtagacggcttttttttttcttgtttaatttactatgaccaag
atgacacaataattagagcaagttccctcgaaaaatctgttccttcatgt
tctcatgaagactctctaccaaaattctaatcttgatgactctgtcaagg
tcaggatgaatggccgacagtgggtcacaatcctccagaaatattgatta
cttaccctgattcccataaggtatgggaggagcttgcatcatctgccttg
atactgacaaaagcatatacagggcagatttctgctgtatatgagagctt
ggaaagaggcaaaggagagcattcctcagaatgctttcctgaatgtggat
ggcacaccaacatctggtgcatgatgttttcataccccaattctagaaca
atggaaagtactaagtatagaaagacaaatagaaatatggcagtaaatat
tggatagttattctacatcacactgagtacctctcattttgctttattgc
tttttccctcatcacacttgtttacatcatcattttactatttaggttca
gcatttcttttggatttgtagactg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_13539161_13540304
seq2: B6Ng01-253P09.g_67_1191 (reverse)

seq1  CAGTCTTAACAAATTCAAAAGGGAAAATGCTGATACTAATAATTAAAATA  50
      ||||||  |||||| ||||||   |||||||||  ||||  | |||||| 
seq2  CAGTCT--ACAAATCCAAAAG---AAATGCTGAACCTAAATAGTAAAAT-  44

seq1  TGAATGATGTAAAACAAGTGTGATGAGGGGAAAAAGCAATAAAGCAAAAT  100
         ||||||| ||||||||||||||| |||||||||||||||||||||||
seq2  --GATGATGT-AAACAAGTGTGATGA-GGGAAAAAGCAATAAAGCAAAAT  90

seq1  GAGGAAGGTTACTCAGTGTGATTGTAGAATAACTATCCAATATTTACTGC  150
      |||  ||| |||||||||||| ||||||||||||||||||||||||||||
seq2  GAG--AGG-TACTCAGTGTGA-TGTAGAATAACTATCCAATATTTACTGC  136

seq1  CATTATTTTCTATTTTGTTCTTTCTATTACTTAGTACTTTCCATTGTTCT  200
      |||   |||||||||   |||||||| |||||||||||||||||||||||
seq2  CAT--ATTTCTATTT--GTCTTTCTA-TACTTAGTACTTTCCATTGTTCT  181

seq1  AGAATTGGGGTATGAAAACATCATGCACCAGATGTTGGTGTGCCATCCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGGGGTATGAAAACATCATGCACCAGATGTTGGTGTGCCATCCAC  231

seq1  ATTCAGGAAAGCATTCTGAGGAATGCTCTCCTTTGCCTCTTTCCAAGCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGAAAGCATTCTGAGGAATGCTCTCCTTTGCCTCTTTCCAAGCTC  281

seq1  TCATATACAGCAGAAATCTGCCCTGTATATGCTTTTGTCAGTATCAAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATATACAGCAGAAATCTGCCCTGTATATGCTTTTGTCAGTATCAAGGC  331

seq1  AGATGATGCAAGCTCCTCCCATACCTTATGGGAATCAGGGTAAGTAATCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGATGCAAGCTCCTCCCATACCTTATGGGAATCAGGGTAAGTAATCA  381

seq1  ATATTTCTGGAGGATTGTGACCCACTGTCGGCCATTCATCCTGACCTTGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTTCTGGAGGATTGTGACCCACTGTCGGCCATTCATCCTGACCTTGA  431

seq1  CAGAGTCATCAAGATTAGAATTTTGGTAGAGAGTCTTCATGAGAACATGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGTCATCAAGATTAGAATTTTGGTAGAGAGTCTTCATGAGAACATGA  481

seq1  AGGAACAGATTTTTCGAGGGAACTTGCTCTAATTATTGTGTCATCTTGGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAACAGATTTTTCGAGGGAACTTGCTCTAATTATTGTGTCATCTTGGT  531

seq1  CATAGTAAATTAAACAAGAAAAAAAAAAGCCGTCTACAATTTCAGGGTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTAAATTAAACAAGAAAAAAAAAAGCCGTCTACAATTTCAGGGTCA  581

seq1  GGCATCTAGCCCGTGCTTTTGGTATTTAGGTTCTCACATGGTAAGAGCAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTAGCCCGTGCTTTTGGTATTTAGGTTCTCACATGGTAAGAGCAT  631

seq1  TGTTTTTCTTTCCTTCTAGTTGGTTTTTTAAATAAAACATCAAACAAGGT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTTTCTTTCCTTCTAGTTGGTTTTTTAAATAAAACATCAAACAAGGT  681

seq1  CTGTTTTAGAACAATGGATGTCTTCTAAGTGTTTACAATGTCATTTTCTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTTTAGAACAATGGATGTCTTCTAAGTGTTTACAATGTCATTTTCTT  731

seq1  GTCCAAATGTATCAGCATGTAAGAACTACATTTTCATCAACTTGTGAGGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCAAATGTATCAGCATGTAAGAACTACATTTTCATCAACTTGTGAGGA  781

seq1  GGAATGCCATATTGTCATATGGATATACGCTAGTGATTTGTGGTAAATCG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGCCATATTGTCATATGGATATACGCTAGTGATTTGTGGTAAATCG  831

seq1  TGGAAATTAACATTTTCTATGTCTAATGTTCACTAATTGTGAAAACTTCT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAATTAACATTTTCTATGTCTAATGTTCACTAATTGTGAAAACTTCT  881

seq1  AAACTTTTCTTTGGTAGTTATTTAAAACAGACACTACTTTCCTCTCAGGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTTTTCTTTGGTAGTTATTTAAAACAGACACTACTTTCCTCTCAGGT  931

seq1  AAAATGATCTTCTGTAGTATGGCTATAGCTAAGTAGTAGGAGTAACTCTT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGATCTTCTGTAGTATGGCTATAGCTAAGTAGTAGGAGTAACTCTT  981

seq1  TTCTTCTCTTTAAAATCATGAGCTACACTCAAAAATGTCTTAACACAACT  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTCTCTTTAAAATCATGAGCTACACTCAAAAATGTCTTAACACAACT  1031

seq1  ATGTAAATATTACCTAAACAAGGACAAATGCTAAAGACATACCAAATATC  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTAAATATTACCTAAACAAGGACAAATGCTAAAGACATACCAAATATC  1081

seq1  AGAAGGGCTCAATGCCATACCAACTACAGGCAACTGTGGAATTC  1144
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGGCTCAATGCCATACCAACTACAGGCAACTGTGGAATTC  1125