BAC Information

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BAC

Clone NameB6Ng01-254F15
Chromosome19 (Build37)
Map Location 3,751,344 - 3,905,809
singlet/doubletdoublet
Overlap geneSuv420h1, Chka, Tcirg1
Upstream geneLOC630980, LOC665804, EG665806, EG665810, LOC100039218, Ighmbp2, Mrpl21, LOC665826, Cpt1a, Mtl5, Gal, Saps3, LOC100043581, Lrp5, 1810055G02Rik, LOC100039289
Downstream geneNdufs8, Aldh3b1, Unc93b1, LOC100039337, 1700055N04Rik, Aldh3b2, Acy3, Tbx10, Nudt8, Doc2g, Ndufv1, Gstp1, Gstp2, BC021614, Cabp2, Cdk2ap2, Pitpnm1, Aip, Tmem134, Cabp4, Gpr152, Coro1b, Ptprcap, Rps6kb2, AI790298, Tbc1d10c, Ppp1ca, Rad9, Clcf1, Pold4, Ssh3, Ankrd13d, Adrbk1, Fbxl11, LOC100043628, Rhod, Syt12, 2010003K11Rik, Pcx, Lrfn4, Rce1, Gm960, Spnb3, Rbm4b, Rbm4, Rbm14, Ccs, Ccdc87, Ctsf, Actn3, Zdhhc24, Bbs1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-254F15.bB6Ng01-254F15.g
ACCGA060838GA060839
length813808
definitionB6Ng01-254F15.b B6Ng01-254F15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(3,751,344 - 3,752,155)(3,905,009 - 3,905,809)
sequence
gaattctgtgtcctgcacagctgtccttcaaaaccaaagagaaagttaca
tatgttgcccggtagacaagagccactagagctcattacaagtagccttg
ccccacaagatatgcttctgtgagcccttcaagggaaaaagaaatgtcag
gagatggtaactcaaagctgttagatgtgaagattttaattaagctatgg
tgcactgatgggtcagttcacttggatcagccacattgcacacagatgag
cctttgtacagtgatcagccattgcacacgatgatccattgcacagggat
gagccattgcacactgtcctagttagggtttctattgctatgatgaaata
tcatgatcaaagcaacttgtagaagaatgagtttatttgacttatacttc
caaatcactgttcattactgtaggaagtcaggacgggaactcaaacaggg
caagaacccagaggcagaagctgatgtggaggccatagaggggtgctgct
tactgtttgctccccgtggcttgctcaacctactttcttttttttttttt
tttttttttgactcaggttttcttttcttttttttttttttaaagattta
tttattattatatgtaagtaccctgtagctatcttcagacacaccagaag
agggagtcagatcttgttacggatggttgtgagccaccatgtggttgctg
ggatttgaactctggaccttcagaagagcagttgggtgctctttacccac
tgagccatctcaccagccctcaacctactttcttatagagcacaggacca
cccgcccagggat
gaattctttcctttcccaagctggggacaggactgtggtttccccttaag
taaaccagacctagggaggaagtggtctgctgggcagacccaggcagtaa
gctgggcccattagtatctgaagttcctctcgatgtgtgtccccacttgt
gacctccagccctcaacgccagtttaagagctgaggaaacggtgtcccca
agatcctgaacctgaagagcagtagctaccaaggagcaggcagtggcccc
agggagagtgttggcttttggctgggcatctgcagggcagttgaagagtc
cgtttgctttccagccaggaagtgtgtgcctgctggggttagagggaggc
caccagagcttcccgcccattgtttcatggtttcactttcccagtttcaa
caccaagacttttcccagccccacaggcaatgttgcgggcagccaaaggc
aacccccagccaatcctccccttcaggatttcagctccagggaacttaga
gggagttccacccccaccctctgcatgtataaggaagcaggctagacagc
tcagaggcatttggtgtcagttgtcacagcctagggtctcagggctaagc
tgggtctcaagtggggggcagacagagaggtgatccagtgctgaaaacac
tgctggagccagggtgtctgggagctgctgggctagaagcaagaaggcag
cagaaggaaggccagcttaaagacagcctacggtggtaggctttgggggt
cactgggctgctccatgcttttttttttttttctttttttttttgggggg
ggggggga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_3751344_3752155
seq2: B6Ng01-254F15.b_45_857

seq1  GAATTCTGTGTCCTGCACAGCTGTCCTTCAAAACCAAAGAGAAAGTTACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTGTCCTGCACAGCTGTCCTTCAAAACCAAAGAGAAAGTTACA  50

seq1  TATGTTGCCCGGTAGACAAGAGCCACTAGAGCTCATTACAAGTAGCCTTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTTGCCCGGTAGACAAGAGCCACTAGAGCTCATTACAAGTAGCCTTG  100

seq1  CCCCACAAGATATGCTTCTGTGAGCCCTTCAAGGGAAAAAGAAATGTCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCACAAGATATGCTTCTGTGAGCCCTTCAAGGGAAAAAGAAATGTCAG  150

seq1  GAGATGGTAACTCAAAGCTGTTAGATGTGAAGATTTTAATTAAGCTATGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGGTAACTCAAAGCTGTTAGATGTGAAGATTTTAATTAAGCTATGG  200

seq1  TGCACTGATGGGTCAGTTCACTTGGATCAGCCACATTGCACACAGATGAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCACTGATGGGTCAGTTCACTTGGATCAGCCACATTGCACACAGATGAG  250

seq1  CCTTTGTACAGTGATCAGCCATTGCACACGATGATCCATTGCACAGGGAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTACAGTGATCAGCCATTGCACACGATGATCCATTGCACAGGGAT  300

seq1  GAGCCATTGCACACTGTCCTAGTTAGGGTTTCTATTGCTATGATGAAATA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCATTGCACACTGTCCTAGTTAGGGTTTCTATTGCTATGATGAAATA  350

seq1  TCATGATCAAAGCAACTTGTAGAAGAATGAGTTTATTTGACTTATACTTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGATCAAAGCAACTTGTAGAAGAATGAGTTTATTTGACTTATACTTC  400

seq1  CAAATCACTGTTCATTACTGTAGGAAGTCAGGACGGGAACTCAAACAGGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAATCACTGTTCATTACTGTAGGAAGTCAGGACGGGAACTCAAACAGGG  450

seq1  CAAGAACCCAGAGGCAGAAGCTGATGTGGAGGCCATAGAGGGGTGCTGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGAACCCAGAGGCAGAAGCTGATGTGGAGGCCATAGAGGGGTGCTGCT  500

seq1  TACTGTTTGCTCCCCGTGGCTTGCTCAACCTACTTTCTTTTTTTTTTTTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGTTTGCTCCCCGTGGCTTGCTCAACCTACTTTCTTTTTTTTTTTTT  550

seq1  TTTTTTTTTGACTCAGGTTTTCTTTTCTTTTTTTTTTTTTTAAAGATTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTGACTCAGGTTTTCTTTTCTTTTTTTTTTTTTTAAAGATTTA  600

seq1  TTTATTATTATATGTAAGTACCCTGTAGCTATCTTCAGACACACCAGAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTATTATATGTAAGTACCCTGTAGCTATCTTCAGACACACCAGAAG  650

seq1  AGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAGTCAGATCTTGTTACGGATGGTTGTGAGCCACCATGTGGTTGCTG  700

seq1  GGATTTGAACTCTGGACCTTCAGAAGAGCAGTTGGGTGCTC-TTACCCAC  749
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGATTTGAACTCTGGACCTTCAGAAGAGCAGTTGGGTGCTCTTTACCCAC  750

seq1  TGAGCCATCTCACCAGCCCTCAACCTACTTTCTTATAGAGCACAGGACCA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGCCATCTCACCAGCCCTCAACCTACTTTCTTATAGAGCACAGGACCA  800

seq1  CCAGCCCAGGGAT  812
      || ||||||||||
seq2  CCCGCCCAGGGAT  813

seq1: chr19_3905009_3905809
seq2: B6Ng01-254F15.g_69_876 (reverse)

seq1  TCCCCCCCCCCC----AAAAAAAAAG--AAAAAAAAAAAAGCATGGAGCA  44
      ||||||||||||    ||||||||||  ||||||||||||||||||||||
seq2  TCCCCCCCCCCCCCAAAAAAAAAAAGAAAAAAAAAAAAAAGCATGGAGCA  50

seq1  GCCCAGTGA-CCCCAAAGCCTACCACCGTAGGCTGTCTTTAAGCTGGCCT  93
      ||||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  GCCCAGTGACCCCCAAAGCCTACCACCGTAGGCTGTCTTTAAGCTGGCCT  100

seq1  TCCTTCTGCTGCCTTCTTGCTTCTAGCCCAGCAGCTCCCAGACACCCTGG  143
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCTGCTGCCTTCTTGCTTCTAGCCCAGCAGCTCCCAGACACCCTGG  150

seq1  CTCCAGCAGTGTTTTCAGCACTGGATCACCTCTCTGTCTGCCCCCCACTT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCAGTGTTTTCAGCACTGGATCACCTCTCTGTCTGCCCCCCACTT  200

seq1  GAGACCCAGCTTAGCCCTGAGACCCTAGGCTGTGACAACTGACACCAAAT  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACCCAGCTTAGCCCTGAGACCCTAGGCTGTGACAACTGACACCAAAT  250

seq1  GCCTCTGAGCTGTCTAGCCTGCTTCCTTATACATGCAGAGGGTGGGGGTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCTGAGCTGTCTAGCCTGCTTCCTTATACATGCAGAGGGTGGGGGTG  300

seq1  GAACTCCCTCTAAGTTCCCTGGAGCTGAAATCCTGAAGGGGAGGATTGGC  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCCTCTAAGTTCCCTGGAGCTGAAATCCTGAAGGGGAGGATTGGC  350

seq1  TGGGGGTTGCCTTTGGCTGCCCGCAACATTGCCTGTGGGGCTGGGAAAAG  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGTTGCCTTTGGCTGCCCGCAACATTGCCTGTGGGGCTGGGAAAAG  400

seq1  TCTTGGTGTTGAAACTGGGAAAGTGAAACCATGAAACAATGGGCGGGAAG  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGTGTTGAAACTGGGAAAGTGAAACCATGAAACAATGGGCGGGAAG  450

seq1  CTCTGGTGGCCTCCCTCTAACCCCAGCAGGCACACACTTCCTGGCTGGAA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGGTGGCCTCCCTCTAACCCCAGCAGGCACACACTTCCTGGCTGGAA  500

seq1  AGCAAACGGACTCTTCAACTGCCCTGCAGATGCCCAGCCAAAAGCCAACA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAAACGGACTCTTCAACTGCCCTGCAGATGCCCAGCCAAAAGCCAACA  550

seq1  CTCTCCCTGGGGCCACTGCCTGCTCCTTGGTAGCTACTGCTCTTCAGGTT  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCTGGGGCCACTGCCTGCTCCTTGGTAGCTACTGCTCTTCAGGTT  600

seq1  CAGGATCTTGGGGACACCGTTTCCTCAGCTCTTAAACTGGCGTTGAGGGC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATCTTGGGGACACCGTTTCCTCAGCTCTTAAACTGGCGTTGAGGGC  650

seq1  TGGAGGTCACAAGTGGGGACACACATCGAGAGGAACTTCAGATACTAATG  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGTCACAAGTGGGGACACACATCGAGAGGAACTTCAGATACTAATG  700

seq1  GGCCCAGCTTACTGCCTGGGTCTGCCCAGCAGACCACTTCCTCCCTAGGT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCCAGCTTACTGCCTGGGTCTGCCCAGCAGACCACTTCCTCCCTAGGT  750

seq1  CTGGTTTACTTAAGGGGAAACCACAGTCCTGTCCCCAGCTTGGGAAAGGA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTTTACTTAAGGGGAAACCACAGTCCTGTCCCCAGCTTGGGAAAGGA  800

seq1  AAGAATTC  801
      ||||||||
seq2  AAGAATTC  808