MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-256E04
Chromosome	19 (Build37)
Map Location	54,149,525 - 54,327,337
singlet/doublet	doublet
Overlap gene	none
Upstream gene	LOC668545, LOC674277, Add3, 1700001K23Rik, Mxi1, Smndc1, Dusp5, LOC100043462, Smc3, Rbm20, LOC100042979, Pdcd4, 2310002J21Rik, Shoc2, Adra2a
Downstream gene	LOC100043004, Gpam, Tectb, Gucy2g
Link	Open Mouse BAC browser

Click to get alignment info.

name	LOC668545 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:668545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	LOC674277 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:674277
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Add3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:27360 MGI:1351615
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	1700001K23Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69319 MGI:1916569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs

name	Mxi1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 3 mRNAs

name	Smndc1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:76479 MGI:1923729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Dusp5 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:240672 MGI:2685183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 5 Proteins

name	LOC100043462 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 314 ESTs, 2 Proteins

name	Smc3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:13006 MGI:1339795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Rbm20 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73713 MGI:1920963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins

name	LOC100042979 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100042979
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 Protein pseudo : _no_value

name	Pdcd4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:18569 MGI:107490
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2310002J21Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:66360 MGI:1913610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs

name	Shoc2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:56392 MGI:1927197
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Adra2a (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:11551 MGI:87934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043004 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins

name	Gpam (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14732 MGI:109162
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Tectb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:21684 MGI:109574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gucy2g (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:73707 MGI:106025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC668545 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270515 GeneID:668545
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC668545 transcript_id : XM_001487806.1

name	Add3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:31542110 GeneID:27360 MGI:1351615
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adducin 3 (gamma) transcript_id : NM_013758.2

name	1700001K23Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94406040 GeneID:69319 MGI:1916569
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 4 ESTs product : RIKEN cDNA 1700001K23 gene transcript_id : XM_001002211.1

name	Mxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520595 GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max interacting protein 1 transcript_id : NM_001008542.2

name	Mxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520598 GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max interacting protein 1 transcript_id : NM_010847.3

name	Mxi1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114520597 GeneID:17859 MGI:97245
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Max interacting protein 1 transcript_id : NM_001008543.2

name	Smndc1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130023 GeneID:76479 MGI:1923729
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : survival motor neuron domain containing 1 transcript_id : NM_172429.2

name	Dusp5 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270568 GeneID:240672 MGI:2685183
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 84 ESTs, 5 Proteins product : dual specificity phosphatase 5 transcript_id : XM_140740.8

name	LOC100043462 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270570 GeneID:100043462
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 5 mRNAs, 314 ESTs, 2 Proteins product : similar to nuclear transport factor 2 transcript_id : XM_001480585.1

name	Smc3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:36031034 GeneID:13006 MGI:1339795
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : structural maintenace of chromosomes 3 transcript_id : NM_007790.2

name	Rbm20 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270572 GeneID:73713 MGI:1920963
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 2 Proteins product : RNA binding motif protein 20 transcript_id : XM_001002314.2

name	Pdcd4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142356921 GeneID:18569 MGI:107490
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : programmed cell death 4 transcript_id : NM_011050.3

name	2310002J21Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149270574 GeneID:66360 MGI:1913610
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 46 ESTs product : RIKEN cDNA 2310002J21 gene transcript_id : XM_001480596.1

name	Shoc2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142372584 GeneID:56392 MGI:1927197
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : soc-2 (suppressor of clear) homolog (C. elegans) transcript_id : NM_019658.5

name	Adra2a (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:78711825 GeneID:11551 MGI:87934
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : adrenergic receptor, alpha 2a transcript_id : NM_007417.2

name	LOC100043004 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149270519 GeneID:100043004
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins product : similar to cyclic nucleotide gated channel beta 1 transcript_id : XM_001479278.1

name	Gpam (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802122 GeneID:14732 MGI:109162
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : glycerol-3-phosphate acyltransferase, mitochondrial transcript_id : NM_008149.3

name	Tectb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130418 GeneID:21684 MGI:109574
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : tectorin beta transcript_id : NM_009348.3

name	Gucy2g (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:124487300 GeneID:73707 MGI:106025
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : guanylate cyclase 2g transcript_id : NM_001081076.1

name	LOC668545 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270516 GeneID:668545
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001487856.1

name	Add3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31542111 CCDS:CCDS29900.1 GeneID:27360 MGI:1351615
definition	GO_component : GO:0005856 - cytoskeleton [Evidence IDA]; GO:0016020 - membrane [Evidence IDA] GO_function : GO:0005516 - calmodulin binding [Evidence IEA]; GO:0005198 - structural molecule activity [Evidence IDA] codon_start : 1 note : gamma adducin; cytoskeletal protein product : adducin 3 (gamma) protein_id : NP_038786.2

name	1700001K23Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94406041 GeneID:69319 MGI:1916569
definition	codon_start : 1 product : hypothetical protein LOC69319 protein_id : XP_001002211.1

name	Mxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114520596 GeneID:17859 MGI:97245
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform b is encoded by transcript variant 2 product : Max interactor 1 isoform b protein_id : NP_001008542.2

name	Mxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6754766 CCDS:CCDS29901.1 GeneID:17859 MGI:97245
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform a is encoded by transcript variant 1 product : Max interactor 1 isoform a protein_id : NP_034977.1

name	Mxi1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:57242751 GeneID:17859 MGI:97245
definition	GO_component : GO:0005634 - nucleus [Evidence IDA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0030528 - transcription regulator activity [Evidence IEA]; GO:0016564 - transcriptional repressor activity [Evidence IDA] GO_process : GO:0000122 - negative regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : isoform c is encoded by transcript variant 3 product : Max interactor 1 isoform c protein_id : NP_001008543.1

name	Smndc1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:27369569 CCDS:CCDS29902.1 GeneID:76479 MGI:1923729
definition	GO_component : GO:0005737 - cytoplasm [Evidence IEA]; GO:0005634 - nucleus [Evidence IEA]; GO:0005681 - spliceosome complex [Evidence IEA] GO_function : GO:0003676 - nucleic acid binding [Evidence IEA]; GO:0003723 - RNA binding [Evidence IEA] GO_process : GO:0006915 - apoptosis [Evidence IEA]; GO:0006397 - mRNA processing [Evidence IEA]; GO:0000398 - nuclear mRNA splicing, via spliceosome [Evidence IEA]; GO:0000245 - spliceosome assembly [Evidence IEA] codon_start : 1 product : survival motor neuron domain containing 1 protein_id : NP_766017.1

name	Dusp5 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270569 GeneID:240672 MGI:2685183
definition	codon_start : 1 product : dual specificity phosphatase 5 protein_id : XP_140740.4

name	LOC100043462 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270571 GeneID:100043462
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480635.1

name	Smc3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:36031035 GeneID:13006 MGI:1339795
definition	GO_component : GO:0005694 - chromosome [Evidence IEA]; GO:0008278 - cohesin complex [Evidence ISS]; GO:0005737 - cytoplasm [Evidence ISS]; GO:0000800 - lateral element [Evidence IDA]; GO:0016363 - nuclear matrix [Evidence ISS]; GO:0005634 - nucleus [Evidence IDA]; GO:0000922 - spindle pole [Evidence ISS] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0016887 - ATPase activity [Evidence IEA]; GO:0045502 - dynein binding [Evidence ISS]; GO:0003777 - microtubule motor activity [Evidence ISS]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0046982 - protein heterodimerization activity [Evidence ISS] GO_process : GO:0007049 - cell cycle [Evidence IEA]; GO:0051301 - cell division [Evidence IEA]; GO:0051276 - chromosome organization and biogenesis [Evidence IEA]; GO:0007059 - chromosome segregation [Evidence IEA]; GO:0006281 - DNA repair [Evidence IEA]; GO:0007126 - meiosis [Evidence IPI] [Evidence ISS]; GO:0007067 - mitosis [Evidence IEA]; GO:0007052 - mitotic spindle organization and biogenesis [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA]; GO:0007165 - signal transduction [Evidence ISS]; GO:0007062 - sister chromatid cohesion [Evidence ISS] codon_start : 1 product : chondroitin sulfate proteoglycan 6 protein_id : NP_031816.2

name	Rbm20 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270573 GeneID:73713 MGI:1920963
definition	codon_start : 1 note : overriding stop codons product : similar to hCG2036763 protein_id : XP_001002314.2 transl_except : (pos:53895356..53895358,aa:OTHER)

name	Pdcd4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:110625656 CCDS:CCDS29903.1 GeneID:18569 MGI:107490
definition	GO_component : GO:0005737 - cytoplasm [Evidence ISS]; GO:0005829 - cytosol [Evidence ISS]; GO:0005634 - nucleus [Evidence ISS] GO_function : GO:0016853 - isomerase activity [Evidence IEA]; GO:0005515 - protein binding [Evidence ISS] [Evidence IPI] GO_process : GO:0007569 - cell aging [Evidence ISS]; GO:0043508 - negative regulation of JNK activity [Evidence ISS]; GO:0016481 - negative regulation of transcription [Evidence ISS] codon_start : 1 product : programmed cell death 4 protein_id : NP_035180.2

name	2310002J21Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149270575 GeneID:66360 MGI:1913610
definition	codon_start : 1 product : hypothetical protein LOC66360 protein_id : XP_001480646.1

name	Shoc2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31543701 CCDS:CCDS29904.1 GeneID:56392 MGI:1927197
definition	GO_function : GO:0016740 - transferase activity [Evidence IEA] codon_start : 1 note : Ras-binding protein SUR-8; suppressor of clear, C. elegans, homolog of product : soc-2 (suppressor of clear) homolog protein_id : NP_062632.2

name	Adra2a (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:78711826 CCDS:CCDS29905.1 GeneID:11551 MGI:87934
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004935 - adrenoceptor activity [Evidence IMP]; GO:0004938 - alpha2-adrenergic receptor activity [Evidence TAS]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0042596 - fear response [Evidence IMP]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IDA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 note : subtype alpha2-C10; alpha2A-adrenergic receptor product : adrenergic receptor, alpha 2a protein_id : NP_031443.2

name	LOC100043004 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149270520 GeneID:100043004
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001479328.1

name	Gpam (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:34536827 CCDS:CCDS29906.1 GeneID:14732 MGI:109162
definition	GO_component : GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005743 - mitochondrial inner membrane [Evidence IDA]; GO:0005739 - mitochondrion [Evidence IDA] GO_function : GO:0008415 - acyltransferase activity [Evidence IEA]; GO:0004366 - glycerol-3-phosphate O-acyltransferase activity [Evidence IDA]; GO:0016740 - transferase activity [Evidence IEA] GO_process : GO:0044255 - cellular lipid metabolism [Evidence IEA]; GO:0006631 - fatty acid metabolism [Evidence IMP]; GO:0008152 - metabolism [Evidence IEA]; GO:0008654 - phospholipid biosynthesis [Evidence IEA]; GO:0040018 - positive regulation of body size [Evidence IMP] codon_start : 1 product : glycerol-3-phosphate acyltransferase, mitochondrial protein_id : NP_032175.2

name	Tectb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7363457 CCDS:CCDS29907.1 GeneID:21684 MGI:109574
definition	GO_component : GO:0005578 - extracellular matrix (sensu Metazoa) [Evidence IDA] [Evidence TAS]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005201 - extracellular matrix structural constituent [Evidence IDA] [Evidence TAS]; GO:0048503 - GPI anchor binding [Evidence IEA] GO_process : GO:0007605 - sensory perception of sound [Evidence TAS] codon_start : 1 note : [b]-tectorin product : tectorin beta protein_id : NP_033374.2

name	Gucy2g (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:124487301 GeneID:73707 MGI:106025
definition	GO_component : GO:0009897 - external side of plasma membrane [Evidence IDA]; GO:0016021 - integral to membrane [Evidence IEA]; GO:0016020 - membrane [Evidence IEA]; GO:0005624 - membrane fraction [Evidence ISS] [Evidence IDA] GO_function : GO:0005524 - ATP binding [Evidence IEA]; GO:0009055 - electron carrier activity [Evidence IEA]; GO:0004383 - guanylate cyclase activity [Evidence ISS] [Evidence IDA]; GO:0008528 - peptide receptor activity, G-protein coupled [Evidence IEA]; GO:0016849 - phosphorus-oxygen lyase activity [Evidence IEA]; GO:0015035 - protein disulfide oxidoreductase activity [Evidence IEA]; GO:0004713 - protein-tyrosine kinase activity [Evidence IEA] GO_process : GO:0006182 - cGMP biosynthesis [Evidence ISS] [Evidence IDA]; GO:0009190 - cyclic nucleotide biosynthesis [Evidence IEA]; GO:0007242 - intracellular signaling cascade [Evidence IEA]; GO:0006468 - protein amino acid phosphorylation [Evidence IEA] codon_start : 1 product : guanylate cyclase 2g protein_id : NP_001074545.1

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 4 pseudo : _no_value

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 3 pseudo : _no_value

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 2 pseudo : _no_value

name	LOC674277 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:674277
definition	number : 1 pseudo : _no_value

name	LOC100042979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042979
definition	number : 1 pseudo : _no_value

name	LOC100042979 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:100042979
definition	number : 2 pseudo : _no_value

clone name	MSMg01-394O13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-518N02
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-272C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-075I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-080E17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-345D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-343G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-360J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-462H15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-211H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-484P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516P12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438A04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-402P03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-425N14
singlet/doublet	doublet
plural/unique	plural

clone name	MSMg01-542E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-475L16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-399D19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499P01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-426C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-340A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455F11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-384H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-270G16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-275O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172K12
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-412E13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-046K06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-342F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-476N13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-060E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439I09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-403H22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-430I24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444E13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-329G18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262H20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-445I21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-363I07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170L20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099F15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-327I23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288B14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-459G15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-133I21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323D14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-538H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479N11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-072A09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-507O13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-203O21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-059I17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-486B09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-052L08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-074N15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280E09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087P19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-472D03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372E04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-411H24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-338J01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-383M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-523M23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-449P14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-153L15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-332N22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-183N23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-123N14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-446O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108P15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-107K02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-536E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-504J06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-353N18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-318J15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388L07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065C13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-396A12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-063F16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-211M10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-187L02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-337F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-539L02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-189H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-414L14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128B18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521C24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-417A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386F03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-514P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-455J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-347I06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-182N21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-391O22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-316M18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-212E01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-315E07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208J17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-172C24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311L10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-066G21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326H02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034A22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-344E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-348D07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123K15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-319N17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-020M05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-325A12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-161F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-304J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-063G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-093B23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-057E19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-125O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-340H19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-037B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116H12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026P11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256E04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-029L12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-237O03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-155C04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-042D19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-224O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-264E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058H19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-076M14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-350E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-143N05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-193L09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074L02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-029A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-303D09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-206L11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-116E19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-333B16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-140E14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-230A07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-153D24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-151M09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338F20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-007A19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-234C17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-208E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-008I23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-167K17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-156G09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-306N20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-139K13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069G14
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-256E04.b	B6Ng01-256E04.g
ACC	GA062266	GA062267
length	1,146	1,075
definition	B6Ng01-256E04.b	B6Ng01-256E04.g
singlet/doublet	doublet	doublet
BLAST hit	unique	unique
Map location.	(54,326,167 - 54,327,337)	(54,149,525 - 54,150,593)
sequence	gaattccagatataggttttctgggactctgaactcagctggcaagaggg cctgtcactcctgcattgcatcttgttatgtgctgactcacatcatgttt ctgtagtttttatatacatacactttttgaatgacaataggcatagattg aggaacccccgggacttcctgttctcttctacagtcagatggtccaggaa cagacacagtgacaatggcacttaacagaggtagaccagcgctgaggaga aggcagcctaaagagacccatgctgtgtgaagcttctgcccactgggtac cgagtctatgttcaggatgtgtaggaagcacacctgtgccctggcaagca aagcaaaacctgcagaatccgccaccaaggcctggcatgcacgtgtctga ggcacagtgaggataggagaagagtgaaagaaccaaggtaataatgagag tcgccttggccatggacggcctctcagaaccttgcttctgtgtactggag ggagagtacctagcctagacacagagacattagtcagtttcaacaagtcc caatcagtggtgtctcagatgaacttgacctgtcatgctaggtcagcagg ctgagaacaggcctatctctgcattttcagaaaatccctgcataccgtaa ggctacccagaggtcagctacacaggccttcaagacaaagacaacagcct gagctgtgtatcacggtgctgacatttctctcagatcgctaagaacactc tacactgagcaatcccagccatgaacccagggcccactgccacagcatct ctttgtgaaactggatttttatgattattcaaactgccttctgagaccta cttgttcagggcatcacagatgtgtctgtatcaaatacatattgtggggt attctggaaacagttttctttgtataaaaaaattatatacagaaaaccaa aagtgagaggagatgcccttagccagtgatttctgaatatatgttaatca agggtaagattaagtgctggtcattcaattgatgcatctgtaccatataa accccaaactgaaacagtcagttctttttatgtcagccagtgaattggtc actccttaacttctctgttatgcttacattttaacaatttttaaat	gaattccaaaggatctgttgaggactgatacactgttctataataagcac aagctatagtattgctgcttgatttcacaggtgaagacaggaagacctaa agataccaggcacagcagtggacgaaatgattggttgggtcagggaccgt gtcactcgaggataaaggccaagaagagagtatgcaggacatcccgtgtg gcgtctatcatttggctaatttctgttgtgagcaaatctgggttttatta tgttctagaagggatggtgttcagagaaaagagccctagccttgctcccc tccttcccttgcagttagtatcccctgccattcagaaagccatcagtgaa gctgttgtgtgcgagccgcgtatgtcctcagttcctggtggtattgatgg gtggctcctcaacacagacaaaataggggaggtcttctttctgagggctg ctgggcctaacggggtctcactcctaatccttcagggcccgtctccttgt agcccttgcttaacatatttcccctttttttctgctttgaaagcagatcc aagaatttattcgtctgtttaatcatctaaaatatattgagcaccaactg tttgctgggcacttgttccaccgaggtgagcagagtaaataagaccctgc atctatgagcctcttgttcaagagagcgaacggttaatcaaagatacaca caaacgtgcgatttcagcgtcacctctgcccgcccggtgagtgcgctatc agagggaagtccagctgatttgacacgggataaatgttttaaattggtaa ttggtgtccctaaaggtttccagggagtgtttctgagagcccggtagggt gaagaaccatcatggaagatgaatcctggaggtagcgggcatctgggtat cccgcagtttcctgtttctgggaatcacatagggacattttgatacccaa atgaaaaggtgctgctttcatttcatttcatttcatttcatttcatttca tgcataacaacccagcagttagttgtctttgatcattccacttggaacaa gtcccaaccctcagttactgatctg
quality values	Open. Hide. 58 33 14 29 58 58 32 21 54 47 51 42 42 44 56 47 62 62 62 62 62 54 62 62 62 41 33 62 62 62 56 24 22 31 27 25 14 13 25 27 44 62 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 56 44 46 33 38 56 59 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 59 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 59 59 62 62 62 62 62 62 62 62 62 62 62 59 62 56 62 62 59 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 47 54 62 62 62 62 62 62 62 62 54 56 62 47 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 54 47 62 62 62 62 62 62 62 54 49 54 62 47 47 62 62 62 62 49 62 62 54 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 58 54 58 58 54 42 58 58 58 45 58 58 58 58 58 58 58 58 58 58 48 58 58 54 58 58 58 58 58 49 58 58 58 58 54 58 58 52 58 58 58 58 58 58 58 58 58 58 58 58 54 54 58 58 58 58 54 58 58 58 54 54 54 52 54 58 54 48 54 54 42 54 50 54 54 48 52 51 51 48 47 50 58 58 58 40 54 58 51 58 58 58 58 58 49 51 58 54 58 50 51 51 58 47 53 58 51 51 51 49 51 50 58 50 58 58 48 53 58 51 51 46 39 58 58 58 58 53 52 58 58 53 54 51 37 58 51 51 54 50 58 42 33 58 50 58 58 46 29 58 33 40 50 49 58 38 58 53 46 53 53 53 53 58 53 52 29 50 58 58 58 47 33 50 58 38 22 50 52 46 58 58 52 58 49 35 51 40 49 54 51 41 58 37 37 58 39 58 37 52 58 49 39 39 46 22 50 42 53 42 27 51 53 42 50 52 53 40 49 54 37 52 54 41 45 31 53 45 46 45 34 54 53 38 39 40 28 49 51 40 40 51 41 46 34 46 30 53 53 52 45 54 37 42 39 41 33 52 54 54 52 54 53 38 39 39 31 33 53 54 40 53 53 53 53 40 34 17 42 34 42 45 53 42 31 53 45 53 33 39 29 45 41 53 39 33 34 32 45 40 41 31 25 23 16 31 34 40 53 53 31 32 47 23 26 52 42 46 39 37 51 41 27 34 51 36 24 51 42 31 31 29 36 35 45 24 45 34 25 37 33 43 34 31 31 46 51 37 35 33 31 31 47 31 31 34 42 35 29 32 46 48 48 24 23 37 36 37 31 38 31 36 36 31 29 46 31 43 34 43 32 31 32 42 32 31 32 39 19 30 13 33 16 30 27 31 19 38 24 41 25 11 31 46 26 31 23 35 36 31 32 26 20 31 33 37 31 24 31 37 26 38 26 28 31 38 33 48 38 32 32 36 31 33 18 12 38 35 21 44 44 44 35 21 33 18 29 32 29 32 23 31 43 22 32 28 22 30 48 43 33 31 33 48 33 34 31 28 29 18 31 28 31 11 4 10 12 14 7 31 30 33 32 32 22 29 30 30 34 24 19 25 19 43 43 26 27 21 33 34 19 27 19 10 14 9 32 7 23 8 38 11 33 21 23 6 16 12 6 5 8 22 28 16 30 19 18 11 24 28 30 10 20 9 18 21 28 12 15 12 15 23 21 8 18 13 34 21 13 15 21 8 20 14 27 31 19 12 12 3 3 6 6 10 16 23 15 15 11 21 22 17 8 15 17 11 13 3 2 6 24 9 5 16 20 15 16 5 24 16 7 20 9 17 13 6 28 30 12 3 19 6 17 7 6 13 17 10 6 3 3 3 3 11 3 5 3 8 4 17 24 26 17 15 1 4 9 23 16 10 10 10 11 5 4 8 16 11 8 6 7 4 3 8 5 6 1 1 5 3 2 4 2 1 3 4 5 2 3 1 4 9 3 4 5 2 1 3 17 5 3 1 3 14 14 13 4 4 5 5 8 17 14 26 29 17 8 13 2 11	Open. Hide. 62 47 38 39 62 62 47 34 62 62 62 62 37 32 56 46 49 56 56 62 62 59 62 59 43 62 62 59 62 62 62 59 59 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 59 59 59 62 62 59 62 59 62 62 59 62 59 59 59 62 62 62 62 62 62 59 62 62 62 62 59 62 62 62 62 62 62 62 62 62 59 59 59 62 59 59 59 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 59 62 62 59 59 59 62 62 59 62 62 62 59 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 59 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 56 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 62 48 62 62 52 62 62 62 62 62 52 62 62 62 54 41 62 62 62 62 62 62 62 62 62 62 62 62 62 41 58 49 47 58 58 58 58 58 58 58 58 58 58 58 58 54 58 58 58 58 58 58 58 58 54 58 58 58 58 58 52 58 58 58 58 58 58 58 52 54 58 58 58 58 58 58 58 58 58 58 58 58 54 58 54 52 58 58 58 58 58 54 54 54 58 47 54 49 54 52 58 54 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 58 43 58 58 58 50 58 58 58 52 53 53 50 58 46 52 53 40 49 53 58 41 50 58 51 58 41 58 58 51 51 58 53 58 52 58 51 52 54 54 58 40 51 58 41 40 58 58 50 53 53 53 46 51 58 58 54 52 58 39 38 49 42 50 51 52 58 52 58 49 51 52 58 58 58 58 50 52 49 51 38 49 51 50 51 50 39 50 51 50 46 32 58 50 53 51 31 52 42 39 46 15 46 39 58 40 49 53 54 31 38 24 54 54 49 54 52 39 52 54 49 41 47 53 54 24 54 54 52 53 51 40 54 53 52 49 28 44 40 54 21 54 36 50 39 46 50 37 51 54 30 34 34 31 35 53 51 44 42 40 38 37 42 46 51 47 51 53 53 54 54 46 40 53 52 52 39 42 39 54 54 45 37 33 51 54 42 53 27 45 49 51 52 39 45 27 52 30 41 42 51 45 34 53 37 53 53 30 32 40 31 35 45 52 31 45 47 29 31 44 15 47 35 35 46 23 42 40 53 28 30 31 35 31 37 27 51 51 34 28 26 30 38 18 46 51 37 35 31 46 30 31 31 17 51 51 31 31 46 32 33 34 42 31 31 45 31 21 31 32 27 23 31 29 32 48 30 21 6 46 13 27 31 19 46 31 30 37 31 42 37 25 26 18 31 43 27 46 33 41 31 30 43 9 31 25 22 48 11 27 26 33 18 25 46 31 22 27 33 26 23 36 31 18 46 33 38 34 34 31 37 31 14 21 22 28 13 29 27 31 31 46 30 31 32 28 13 15 21 12 31 27 31 11 46 15 22 23 37 37 34 29 43 44 25 17 24 31 41 31 14 24 31 13 19 48 30 25 19 22 32 23 48 37 28 25 17 44 14 21 19 32 28 19 34 10 19 31 25 48 33 21 14 9 22 48 48 32 27 21 15 17 33 39 29 26 40 14 13 28 31 43 39 26 25 28 10 21 16 18 26 12 17 48 26 15 14 25 48 19 34 27 29 48 20 29 11 24 34 23 13 13 32 48 7 21 7 21 31 21 7 6 13 40 21 11 11 17 26 8 5 13 27 8 6 7 8 10 47 28 21 26 19 22 10 13 14 15 6 19 6 9 8 28 13 31 22 9 25 13 21 6 21 18 3 7 10 21 15 8 5 8 15 11 20 13 8 4 3 3 14 19 4 16 7 25 9 11 6 4 13 7 8 6 22 13 11 3 6 13 16 9

Alignment Information

BAC End 1

BAC End 2

seq1: chr19_54326167_54327337
seq2: B6Ng01-256E04.b_45_1190 (reverse)

seq1  ATTTAAAAATTGATAAAAATGTAAACATAAAACAGGAGGAAAATATAAAG  50
      |||||||||||| | ||||||||| ||||| | || ||       | |||
seq2  ATTTAAAAATTG-TTAAAATGTAAGCATAACAGAGAAG-------TTAAG  42

seq1  GACAGGTGA-CAATTCACT-GCTGACATTTAAAAAGAAACTGAACCTGTT  98
      ||   |||| ||||||||| |||||||  ||||||| ||||||  ||| |
seq2  GA---GTGACCAATTCACTGGCTGACA--TAAAAAG-AACTGA--CTG-T  83

seq1  TTCAGTTTGGGGTTTTATATTGTACAGAATGCCAATCAATTTGAATGACA  148
      |||||||||||| ||||||| |||||| ||||  ||||| ||||||||| 
seq2  TTCAGTTTGGGG-TTTATATGGTACAG-ATGC--ATCAA-TTGAATGACC  128

seq1  ACCACTTTAAATCTTTACCCTTGATTAACATATTATTTCAGAAATCACTG  198
      | |||||  |||| |||||||||||||||||||   ||||||||||||| 
seq2  AGCACTT--AATC-TTACCCTTGATTAACATAT--ATTCAGAAATCACT-  172

seq1  GGCTAAGGCATTCTCCTCTCACTTTTGGTTTTCTGTATAT-ATTTTTTTA  247
      ||||||||   ||||||||||||||||||||||||||||| |||||||||
seq2  GGCTAAGGGCATCTCCTCTCACTTTTGGTTTTCTGTATATAATTTTTTTA  222

seq1  TACAAAGAAAACTGTTTCCAGAATACCCCACAATATGTATTTGATACAGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAAAACTGTTTCCAGAATACCCCACAATATGTATTTGATACAGA  272

seq1  CACATCTGTGATGCCCTGAACAAGTAGGTCTCAGAAGGCAGTTTGAATAA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATCTGTGATGCCCTGAACAAGTAGGTCTCAGAAGGCAGTTTGAATAA  322

seq1  TCATAAAAATCCAGTTTCACAAAGAGATGCTGTGGCAGTGGGCCCTGGGT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAAAATCCAGTTTCACAAAGAGATGCTGTGGCAGTGGGCCCTGGGT  372

seq1  TCATGGCTGGGATTGCTCAGTGTAGAGTGTTCTTAGCGATCTGAGAGAAA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGGCTGGGATTGCTCAGTGTAGAGTGTTCTTAGCGATCTGAGAGAAA  422

seq1  TGTCAGCACCGTGATACACAGCTCAGGCTGTTGTCTTTGTCTTGAAGGCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCAGCACCGTGATACACAGCTCAGGCTGTTGTCTTTGTCTTGAAGGCC  472

seq1  TGTGTAGCTGACCTCTGGGTAGCCTTACGGTATGCAGGGATTTTCTGAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTAGCTGACCTCTGGGTAGCCTTACGGTATGCAGGGATTTTCTGAAA  522

seq1  ATGCAGAGATAGGCCTGTTCTCAGCCTGCTGACCTAGCATGACAGGTCAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGATAGGCCTGTTCTCAGCCTGCTGACCTAGCATGACAGGTCAA  572

seq1  GTTCATCTGAGACACCACTGATTGGGACTTGTTGAAACTGACTAATGTCT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCATCTGAGACACCACTGATTGGGACTTGTTGAAACTGACTAATGTCT  622

seq1  CTGTGTCTAGGCTAGGTACTCTCCCTCCAGTACACAGAAGCAAGGTTCTG  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTGTCTAGGCTAGGTACTCTCCCTCCAGTACACAGAAGCAAGGTTCTG  672

seq1  AGAGGCCGTCCATGGCCAAGGCGACTCTCATTATTACCTTGGTTCTTTCA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCGTCCATGGCCAAGGCGACTCTCATTATTACCTTGGTTCTTTCA  722

seq1  CTCTTCTCCTATCCTCACTGTGCCTCAGACACGTGCATGCCAGGCCTTGG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTTCTCCTATCCTCACTGTGCCTCAGACACGTGCATGCCAGGCCTTGG  772

seq1  TGGCGGATTCTGCAGGTTTTGCTTTGCTTGCCAGGGCACAGGTGTGCTTC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCGGATTCTGCAGGTTTTGCTTTGCTTGCCAGGGCACAGGTGTGCTTC  822

seq1  CTACACATCCTGAACATAGACTCGGTACCCAGTGGGCAGAAGCTTCACAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACACATCCTGAACATAGACTCGGTACCCAGTGGGCAGAAGCTTCACAC  872

seq1  AGCATGGGTCTCTTTAGGCTGCCTTCTCCTCAGCGCTGGTCTACCTCTGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCATGGGTCTCTTTAGGCTGCCTTCTCCTCAGCGCTGGTCTACCTCTGT  922

seq1  TAAGTGCCATTGTCACTGTGTCTGTTCCTGGACCATCTGACTGTAGAAGA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGCCATTGTCACTGTGTCTGTTCCTGGACCATCTGACTGTAGAAGA  972

seq1  GAACAGGAAGTCCCGGGGGTTCCTCAATCTATGCCTATTGTCATTCAAAA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACAGGAAGTCCCGGGGGTTCCTCAATCTATGCCTATTGTCATTCAAAA  1022

seq1  AGTGTATGTATATAAAAACTACAGAAACATGATGTGAGTCAGCACATAAC  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGTATGTATATAAAAACTACAGAAACATGATGTGAGTCAGCACATAAC  1072

seq1  AAGATGCAATGCAGGAGTGACAGGCCCTCTTGCCAGCTGAGTTCAGAGTC  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATGCAATGCAGGAGTGACAGGCCCTCTTGCCAGCTGAGTTCAGAGTC  1122

seq1  CCAGAAAACCTATATCTGGAATTC  1171
      ||||||||||||||||||||||||
seq2  CCAGAAAACCTATATCTGGAATTC  1146

seq1: chr19_54149525_54150593
seq2: B6Ng01-256E04.g_65_1139

seq1  GAATTCCAAAGGATCTGTTGAGGACTGATACACTGTTCTATAATAAGCAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAAAGGATCTGTTGAGGACTGATACACTGTTCTATAATAAGCAC  50

seq1  AAGCTATAGTATTGCTGCTTGATTTCACAGGTGAAGACAGGAAGACCTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTATAGTATTGCTGCTTGATTTCACAGGTGAAGACAGGAAGACCTAA  100

seq1  AGATACCAGGCACAGCAGTGGACGAAATGATTGGTTGGGTCAGGGACCGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATACCAGGCACAGCAGTGGACGAAATGATTGGTTGGGTCAGGGACCGT  150

seq1  GTCACTCGAGGATAAAGGCCAAGAAGAGAGTATGCAGGACATCCCGTGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACTCGAGGATAAAGGCCAAGAAGAGAGTATGCAGGACATCCCGTGTG  200

seq1  GCGTCTATCATTTGGCTAATTTCTGTTGTGAGCAAATCTGGGTTTTATTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCGTCTATCATTTGGCTAATTTCTGTTGTGAGCAAATCTGGGTTTTATTA  250

seq1  TGTTCTAGAAGGGATGGTGTTCAGAGAAAAGAGCCCTAGCCTTGCTCCCC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTCTAGAAGGGATGGTGTTCAGAGAAAAGAGCCCTAGCCTTGCTCCCC  300

seq1  TCCTTCCCTTGCAGTTAGTATCCCCTGCCATTCAGAAAGCCATCAGTGAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTCCCTTGCAGTTAGTATCCCCTGCCATTCAGAAAGCCATCAGTGAA  350

seq1  GCTGTTGTGTGCGAGCCGCGTATGTCCTCAGTTCCTGGTGGTATTGATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTTGTGTGCGAGCCGCGTATGTCCTCAGTTCCTGGTGGTATTGATGG  400

seq1  GTGGCTCCTCAACACAGACAAAATAGGGGAGGTCTTCTTTCTGAGGGCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCTCCTCAACACAGACAAAATAGGGGAGGTCTTCTTTCTGAGGGCTG  450

seq1  CTGGGCCTAACGGGGTCTCACTCCTAATCCTTCAGGGCCCGTCTCCTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGCCTAACGGGGTCTCACTCCTAATCCTTCAGGGCCCGTCTCCTTGT  500

seq1  AGCCCTTGCTTAACATATTTCCCCTTTTTTTCTGCTTTGAAAGCAGATCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCCTTGCTTAACATATTTCCCCTTTTTTTCTGCTTTGAAAGCAGATCC  550

seq1  AAGAATTTATTCGTCTGTTTAATCATCTAAAATATATTGAGCACCAACTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATTTATTCGTCTGTTTAATCATCTAAAATATATTGAGCACCAACTG  600

seq1  TTTGCTGGGCACTTGTTCCACCGAGGTGAGCAGAGTAAATAAGACCCTGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGGGCACTTGTTCCACCGAGGTGAGCAGAGTAAATAAGACCCTGC  650

seq1  ATCTATGAGCCTCTTGTTCAAGAGAGCGAACGGTTAATCAAAGATACACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTATGAGCCTCTTGTTCAAGAGAGCGAACGGTTAATCAAAGATACACA  700

seq1  CAAACGTGCGATTTCAGCGTCACCTCTGCCCGCCCGGTGAGTGCGCTATC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACGTGCGATTTCAGCGTCACCTCTGCCCGCCCGGTGAGTGCGCTATC  750

seq1  AGAGGGAAGTCCAGCTGATTTGACACGGGATAAATGTTTTAAATTGGTAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGGAAGTCCAGCTGATTTGACACGGGATAAATGTTTTAAATTGGTAA  800

seq1  TTGGTGTCCCT-AAGGTTTCCAGGGAGTGTTTCTGAGAG-CCGGTAGGGT  848
      ||||||||||| ||||||||||||||||||||||||||| ||||||||||
seq2  TTGGTGTCCCTAAAGGTTTCCAGGGAGTGTTTCTGAGAGCCCGGTAGGGT  850

seq1  GAAGAACCATCATGGAAGATGAATCCTGGAGGTAGC-GGCATCTGGGTAT  897
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  GAAGAACCATCATGGAAGATGAATCCTGGAGGTAGCGGGCATCTGGGTAT  900

seq1  CCCGCAGTTTCCTGTTTCT-GGAATCACATAGGGACATTTTGATACCCAA  946
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  CCCGCAGTTTCCTGTTTCTGGGAATCACATAGGGACATTTTGATACCCAA  950

seq1  ATGAAAAGGTGCTGCTTTCATTTCATTTCATTTCATTTCATTTCATTTCA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAAGGTGCTGCTTTCATTTCATTTCATTTCATTTCATTTCATTTCA  1000

seq1  TGCATAAC-ACCCAGCAGTTAGTTGTCTTTGATCCTTTCCACTT-GAACA  1044
      |||||||| |||||||||||||||||||||||| | |||||||| |||||
seq2  TGCATAACAACCCAGCAGTTAGTTGTCTTTGAT-CATTCCACTTGGAACA  1049

seq1  GTTCCCAA-CCTCAG-TACTGGATCTG  1069
        |||||| |||||| |||| ||||||
seq2  AGTCCCAACCCTCAGTTACT-GATCTG  1075

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BAC

BAC End Information

Alignment Information