BAC Information

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BAC

Clone NameB6Ng01-257D05
Chromosome19 (Build37)
Map Location 20,502,541 - 20,503,510
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042218, LOC100041541, Anxa1, LOC100041560, 1500015L24Rik
Downstream geneE030003E18Rik, EG626549, Aldh1a1, Aldh1a7, Tmc1, LOC100042287, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-257D05.bB6Ng01-257D05.g
ACCGA062960GA062961
length1,1011,041
definitionB6Ng01-257D05.b B6Ng01-257D05.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagctctgtgccccatttttaatggggttatttgattt
tctggagtctaccttcttgagttctttatatatatacatgatattagtcc
cctatctgatttaggtttggtaaagatcctttcccagtctgttggtggcc
tttttgtcttactgacagtgtcttttgccttatagaagctttgcaatttt
atgaggtcccatttgtcaattctcattcttacagcacaagccattgttgt
tctattcaggagtttttcccctgtgcccatatcttcaaggcttttcctaa
ctttctcctctacaagtttcagtgtctctagttttatgtggagaaaatgt
ggtacatttacacaatggagtactactcagctattaaaaacaacgaattt
atgaaattcctaggcaaatggatggatctggagggtatcatccttagtga
ggtaacccaataacaaaagaagtcacttgatatgcactcactgataagtg
aatattagcccagaaacttagaataccgaaggtacaatttgcagaacaca
tgaaattcaagaagaacgaaaaccaaagtgtggacacttcgccccttctt
agaattgggaaggaaacacccatggaaggagttacagaggcaaagtttgg
agctgagataaaaggatggaccatccagagactgacccatccagggatac
atcccataatcagccacccaatgaagacactattgcatacgccagcaaga
ttttgctgaaaggaccctgactgatatagctgtctcttgtgaggctatgc
cagtgtctggcaaacacagaagtggatgctcacggtcagctattggatgg
aacacagggcccccaattgaggagttagagaaagtacccaaggagctgaa
tgggtctgcaaccctataggtggaacacattatgagacaatcagtacccc
caggagctcttgactctaactgcatatgtatcaaaagatggcctagtctg
ccatcactggaaagaagaggcccctgtcttgcaaagtttaatatgcccca
atacagggaacaccaggccgagaagtggattggggtgggtagggggaagc
a

gaattctttaccatttaagttgggtcacatgatgtttctaggagctgtct
tgtgacagggcaatgtgatattttgctgaaaacaaacaattgtgagggta
tgtgatgtttagaaagaatataaatggaactccttgggcaatcagcgaga
ggatgctcttccatttgctgatattaagtggtctttactggtcttcaatg
gtctttcctgttctttcatggtccttaattcatagagagaaatgtgtcaa
agaaatttccatggtattctgactgattttggccacttccactgactttt
gccaattgggggaagccttactatttctgttggatcgagccaccactact
gattggtgtttggtgtttgttattgaagtgggctgagggtatcctgataa
aaaaaggggaattgcccctaggggactacaattaaatatgtttacaaccc
ccttttcctattaaccttctttctcccctacccctgatcagtgggctaga
cgggaggttgaagcatttaagaaccctaaataatgtaggttttgaaaaat
ctaagcatacaaggaccaatgcctcagacacctgtgaatttccccagggg
gaggctcagaggggtggcaaagcctccatctggtcctaatgcaaaagtta
gcaatgtgagcaaaagccagcgactgctacttccttctgccagatgattc
cagcctgaaaactgctgcttacagagaccgactgtccagtaactaacccc
tccctctgcgctgtacataattaactctcctagcttccaggttgttgaga
tagttggtgcccgaatatgcacatttccaccttgaccccctgcttttgtg
tatgtgtttctgtccactcctccatctctcataccccagtatggttttca
ggactcaatcccaccagtggcacaggaatatagcatcaccaatgctggga
attgtatcccgaatcctctggaagtgtcagcaaaggctcttcacacctga
ctatccctctagtccacaaagcccttttgttgttattgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_20502541_20503510
seq2: B6Ng01-257D05.g_132_1109

seq1  TGTGATATTTTGCTGAAAACAAACAATTGTGAGGGTATGTGATGTTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGATATTTTGCTGAAAACAAACAATTGTGAGGGTATGTGATGTTTAGA  50

seq1  AAGAATATAAATGGAACTCCTTGGGCAATCAGCGAGAGGATGCTCTTCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAATATAAATGGAACTCCTTGGGCAATCAGCGAGAGGATGCTCTTCCA  100

seq1  TTTGCTGATATTAAGTGGTCTTTACTGGTCTTCAATGGTCTTTCCTGTTC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTGATATTAAGTGGTCTTTACTGGTCTTCAATGGTCTTTCCTGTTC  150

seq1  TTTCATGGTCCTTAATTCATAGAGAGAAATGTGTCAAAGAAATTTCCATG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCATGGTCCTTAATTCATAGAGAGAAATGTGTCAAAGAAATTTCCATG  200

seq1  GTATTCTGACTGATTTTGGCCACTTCCACTGACTTTTGCCAATTGGGGGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTCTGACTGATTTTGGCCACTTCCACTGACTTTTGCCAATTGGGGGA  250

seq1  AGCCTTACTATTTCTGTTGGATCGAGCCACCACTACTGATTGGTGTTTGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTTACTATTTCTGTTGGATCGAGCCACCACTACTGATTGGTGTTTGG  300

seq1  TGTTTGTTATTGAAGTGGGCTGAGGGTATCCTGATAAAAAAAGGGGAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTGTTATTGAAGTGGGCTGAGGGTATCCTGATAAAAAAAGGGGAATT  350

seq1  GCCCCTAGGGGACTACAATTAAATATGTTTACAACCCCCTTTTCCTATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCCTAGGGGACTACAATTAAATATGTTTACAACCCCCTTTTCCTATTA  400

seq1  ACCTTCTTTCTCCCCTACCCCTGATCAGTGGGCTAGACGGGAGGTTGAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTCTTTCTCCCCTACCCCTGATCAGTGGGCTAGACGGGAGGTTGAAG  450

seq1  CATTTAAGAACCCTAAATAATGTAGGTTTTGAAAAATCTAAGCATACAAG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTAAGAACCCTAAATAATGTAGGTTTTGAAAAATCTAAGCATACAAG  500

seq1  GACCAATGCCTCAGACACCTGTGAATTTCCCCAGGGGGAGGCTCAGAGGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAATGCCTCAGACACCTGTGAATTTCCCCAGGGGGAGGCTCAGAGGG  550

seq1  GTGGCAAAGCCTCCATCTGGTCCTAATGCAAAAGTTAGCAATGTGAGCAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGCAAAGCCTCCATCTGGTCCTAATGCAAAAGTTAGCAATGTGAGCAA  600

seq1  AAGCCAGCGACTGCTACTTCCTTCTGCCAGATGATTCCAGCCTG-AAACT  649
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  AAGCCAGCGACTGCTACTTCCTTCTGCCAGATGATTCCAGCCTGAAAACT  650

seq1  GCTGCTTACAGAGACCGACTGTCCAGTAACTAACCCCTCCCTCTGCGCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCTTACAGAGACCGACTGTCCAGTAACTAACCCCTCCCTCTGCGCTG  700

seq1  TACATAATTAACTCTCCTAGCTTCCAGGTTGTTGAGATAGTTGGTGCCCG  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACATAATTAACTCTCCTAGCTTCCAGGTTGTTGAGATAGTTGGTGCCCG  750

seq1  AATATGCACA-TTCCACC-TGA-CCCCTGCTTTTGTGTATGTGTTTCTGT  796
      |||||||||| ||||||| ||| |||||||||||||||||||||||||||
seq2  AATATGCACATTTCCACCTTGACCCCCTGCTTTTGTGTATGTGTTTCTGT  800

seq1  CCACT-CTCCATCTCTCATACCCCAGTTAGGTTTCCAGGACTC-ATCCCA  844
      ||||| |||||||||||||||||||||  ||||| |||||||| ||||||
seq2  CCACTCCTCCATCTCTCATACCCCAGTATGGTTTTCAGGACTCAATCCCA  850

seq1  -CAGTGGCACAGG-ATATAGCACCACCAATGCTGGGAATTG-AACCCGAA  891
       |||||||||||| |||||||| |||||||||||||||||| | ||||||
seq2  CCAGTGGCACAGGAATATAGCATCACCAATGCTGGGAATTGTATCCCGAA  900

seq1  TCCTCTGGAAG-GGCAGCAAAGGCTCTTCAACACTGACCTATCCCTCTAG  940
      ||||||||||| | ||||||||||||||||   |||| ||||||||||||
seq2  TCCTCTGGAAGTGTCAGCAAAGGCTCTTCACACCTGA-CTATCCCTCTAG  949

seq1  TCCACAAAGCCTTTTTGTTGTTTATTGTTG  970
      ||||||||||| |||||||| |||||||||
seq2  TCCACAAAGCCCTTTTGTTG-TTATTGTTG  978


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