BAC Information

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BAC

Clone NameB6Ng01-261E18
Chromosome19 (Build37)
Map Location 14,952,241 - 14,953,389
singlet/doubletsinglet
Overlap genenone
Upstream geneOlfr1503-ps1, Olfr1504, Olfr1505, EG667433, Tle4
Downstream geneEG433225, EG635497, Pomc-ps1, LOC667482
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-261E18.bB6Ng01-261E18.g
ACCGA066002GA066003
length1,2151,139
definitionB6Ng01-261E18.b B6Ng01-261E18.g
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggctgagaagcacctgaaaaaatg
ttcagcaatcttaatcatcagggaaatgcaagtcaaaacaacattgagat
tccacctcacacaccacagtcagaatggctaagataaaaaattcaggtga
cagcagatgctggtgaggatgtggaaaaagaggaacactcctccattgtt
ggtgggattgcaagcttgtacaaccactctggaaatcaatctggtggttc
ctcagaaaattggacatagtactaccagaggatccagcaatacctcttct
gggcatatatccagaagatgttccaaccagtaagaaggacacatgctcca
ctatgttcatagcagccttatttataatagccagaagctggaaagaaccc
agatgcccctcaacagaggaatggatacagaaaatgtggtacatttacac
attggagtactactcagcaattaaaaagaatgaatttatgaaattcctgg
gcaaatggatggacctggagggcatcatccggagtgaggtaactcaatca
caaaagaactcacatgatatgtactcactgataagtggatattagtccag
aaacttagaatacccaagatataagatacaatttgcgaaacacatgaaac
tcaagaagaacaaagatcaaagtgtggatactttgccccttcttagaatt
gggaacaaaacgcccatggaaggagttacagagacaaagtttggagttga
gacgaaaggatggaccatctagagactgccatatccggggatctatccca
taatcagcctcccaatgctgacaccattgcatacactagcaagattttgc
tgaaaggacactgatatagctgtcttttgtgagactatgctggggcctag
caaacacagaagtggatgctcacagtcagctattggatggatcactgggc
ccccaatggaggagctagagaaagtacccaaagatctaagggatctgcaa
ccctataggtggaagaacaatatgaactaccagtaccccagagctcgtgt
ctctagctgcatatgtatcagagatggcctagtcggtcatcactgtaaag
agaggccattggttcgtgcaactttaaatgcctcagtagaagggaacttc
aggcagcattggggatgtggttggttaggccagtgcgagggcaactgcta
ccacactatcatgtc
gaattcttgtgctccatgtacagttctataaatagacaagtaccacacag
ctctgatagcagaatcttcatagttaaaggacaataatatgcaattaaaa
tataatttcagcacaaggacaaatgaaagatggaaattaaatattattcc
atttaggaaagttaggatgagcttcacagagttcgtagagtggacatata
tgtcatctcttgaaggatgaatcaaatttgtaaattaaagaaggaagaag
taagtatgggcagaaggacttacaaacatgcagagttgtagaatacagaa
tgatcaagagatgtttggatgcttgtagaaagtggttgggaaataaatac
tgtccgctgcaatgtggtcttagagcagcgttcctcaatctatgagttag
aaactcccgcaaaaatcctggtaaatgcagattcttatttggcatgtctg
gatgggtactgagatttttccctctctagccaatgctcaggtaatgtctg
gactgcttcacgtcagagcctaccttcgaaacaagtacaagaaacatgta
cgctggctgaaatggacacatctggcagagattttcagacaatggcccct
gaactcctcagcctccagcaacaatctagggaaagaggaactataagtag
tgtaatggtgactaattcacactaaaggcagatgtgaggaccacagcacc
atcaagcctgctttataacaaacatgcgatgggcctcataatccttccct
gataattctaaaaaatcatgtagatttctaagcataatattttgatccaa
gaatatctgagatttcaaaatgatagagttgttaatgatgaataaatttt
ctctcacagcatttgggatcacccatatgattacaaatagcatgagtaac
tctgtgtttgatgacatctttaagtgctggtaattgaagcgtacattagt
gaatctgaaaagaaaattagaagactacattcaaagttgacttcaagccc
ttttatttattggttagcaaaagttatgctgtttaaaattatatccttcc
tcagttatacctgagtcgatggcagagagtaaatgttctttcaagtcatg
cctaggccataggaattactgatgtagcttcactggata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_14952241_14953389
seq2: B6Ng01-261E18.g_68_1206 (reverse)

seq1  TATCCAAGTGAAGCTACCATCAGTTATTTCCCTAT-GCCTAGGCATGAAC  49
      ||||| |||||||||| ||||||| |||  ||||| ||||||||||||  
seq2  TATCC-AGTGAAGCTA-CATCAGTAATT--CCTATGGCCTAGGCATGA--  44

seq1  CTTGAAAGAACATTTTACTCCTCTGCCATCGACCTCAGGTATAACTGA-G  98
      |||||||||||| |||||| |||||||||||| ||||||||||||||| |
seq2  CTTGAAAGAACA-TTTACT-CTCTGCCATCGA-CTCAGGTATAACTGAGG  91

seq1  AAGGATATAATTTTTAAACAGCATAAACTTTTGCTAAACAATTAAATAAA  148
      |||||||||| ||||||||||||| |||||||||||| ||| ||||||||
seq2  AAGGATATAA-TTTTAAACAGCAT-AACTTTTGCTAACCAA-TAAATAAA  138

seq1  A-GGCTTGAAGTCAACTTTGAATGTAGTCTTTCTAATTTTCTTTTCAGAT  197
      | ||||||||||||||||||||||||||| ||||||||||||||||||||
seq2  AGGGCTTGAAGTCAACTTTGAATGTAGTC-TTCTAATTTTCTTTTCAGAT  187

seq1  TCACTAATGTACGCTTCAATTACCAGCACTTAAAGATGTCATCAAACACA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTAATGTACGCTTCAATTACCAGCACTTAAAGATGTCATCAAACACA  237

seq1  GAGTTACTCATGCTATTTGTAATCATATGGGTGATCCCAAATGCTGTGAG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTTACTCATGCTATTTGTAATCATATGGGTGATCCCAAATGCTGTGAG  287

seq1  AGAAAATTTATTCATCATTAACAACTCTATCATTTTGAAATCTCAGATAT  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAATTTATTCATCATTAACAACTCTATCATTTTGAAATCTCAGATAT  337

seq1  TCTTGGATCAAAATATTATGCTTAGAAATCTACATGATTTTTTAGAATTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGGATCAAAATATTATGCTTAGAAATCTACATGATTTTTTAGAATTA  387

seq1  TCAGGGAAGGATTATGAGGCCCATCGCATGTTTGTTATAAAGCAGGCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGAAGGATTATGAGGCCCATCGCATGTTTGTTATAAAGCAGGCTTG  437

seq1  ATGGTGCTGTGGTCCTCACATCTGCCTTTAGTGTGAATTAGTCACCATTA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTGCTGTGGTCCTCACATCTGCCTTTAGTGTGAATTAGTCACCATTA  487

seq1  CACTACTTATAGTTCCTCTTTCCCTAGATTGTTGCTGGAGGCTGAGGAGT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTACTTATAGTTCCTCTTTCCCTAGATTGTTGCTGGAGGCTGAGGAGT  537

seq1  TCAGGGGCCATTGTCTGAAAATCTCTGCCAGATGTGTCCATTTCAGCCAG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGCCATTGTCTGAAAATCTCTGCCAGATGTGTCCATTTCAGCCAG  587

seq1  CGTACATGTTTCTTGTACTTGTTTCGAAGGTAGGCTCTGACGTGAAGCAG  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTACATGTTTCTTGTACTTGTTTCGAAGGTAGGCTCTGACGTGAAGCAG  637

seq1  TCCAGACATTACCTGAGCATTGGCTAGAGAGGGAAAAATCTCAGTACCCA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACATTACCTGAGCATTGGCTAGAGAGGGAAAAATCTCAGTACCCA  687

seq1  TCCAGACATGCCAAATAAGAATCTGCATTTACCAGGATTTTTGCGGGAGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGACATGCCAAATAAGAATCTGCATTTACCAGGATTTTTGCGGGAGT  737

seq1  TTCTAACTCATAGATTGAGGAACGCTGCTCTAAGACCACATTGCAGCGGA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTAACTCATAGATTGAGGAACGCTGCTCTAAGACCACATTGCAGCGGA  787

seq1  CAGTATTTATTTCCCAACCACTTTCTACAAGCATCCAAACATCTCTTGAT  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTATTTATTTCCCAACCACTTTCTACAAGCATCCAAACATCTCTTGAT  837

seq1  CATTCTGTATTCTACAACTCTGCATGTTTGTAAGTCCTTCTGCCCATACT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTGTATTCTACAACTCTGCATGTTTGTAAGTCCTTCTGCCCATACT  887

seq1  TACTTCTTCCTTCTTTAATTTACAAATTTGATTCATCCTTCAAGAGATGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTCTTCCTTCTTTAATTTACAAATTTGATTCATCCTTCAAGAGATGA  937

seq1  CATATATGTCCACTCTACGAACTCTGTGAAGCTCATCCTAACTTTCCTAA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATATGTCCACTCTACGAACTCTGTGAAGCTCATCCTAACTTTCCTAA  987

seq1  ATGGAATAATATTTAATTTCCATCTTTCATTTGTCCTTGTGCTGAAATTA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAATAATATTTAATTTCCATCTTTCATTTGTCCTTGTGCTGAAATTA  1037

seq1  TATTTTAATTGCATATTATTGTCCTTTAACTATGAAGATTCTGCTATCAG  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTTTAATTGCATATTATTGTCCTTTAACTATGAAGATTCTGCTATCAG  1087

seq1  AGCTGTGTGGTACTTGTCTATTTATAGAACTGTACATGGAGCACAAGAAT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGTGTGGTACTTGTCTATTTATAGAACTGTACATGGAGCACAAGAAT  1137

seq1  TC  1149
      ||
seq2  TC  1139