BAC Information

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BAC

Clone NameB6Ng01-263L15
Chromosome19 (Build37)
Map Location 21,922,305 - 21,955,721
singlet/doubletdoublet
Overlap geneTmem2
Upstream geneTmc1, LOC100042294, LOC100041602, LOC100041613, Zfand5, Gda, LOC100041633, 1110059E24Rik, 5730446C15Rik
Downstream geneEG433229, Trpm3, EG433230
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-263L15.bB6Ng01-263L15.g
ACCGA067818GA067819
length2771,132
definitionB6Ng01-263L15.b B6Ng01-263L15.g
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,955,445 - 21,955,721)(21,922,305 - 21,923,432)
sequence
tccatcaaggagatcaaattatagttaacccagacatggccccagcaaga
aaacaagatggaggagcctctgcacccatcttcttacctggtcacaatga
agttcaacatcactttaaagtcttttcaaactaggtctatggtattgaca
ttaactgttgcttaggtgtttctgaaaatatttcaatatgctctgacatt
caatcaaaaggttttgaatatgtagaaagtcacagaaacagggtagtgta
gggtaaatgtgatctggggtggggtgg
gaattccaggtcatgaagtaggtgtaaaaagttcagataaaggaatggtc
acttggtatgttttcagtgacctgtgggcatggatacagttgccttcaaa
gttgcaatgtgttcttgtctagatggtgtttaccagtgaccctcacaaaa
gctacctccctgtacgattccagtcacctgggaaagcagaaattcagcga
ggagatccatccattatttccgtaagtacagtctggtgtggccccagtct
tttgggggctgctgtaagagaaattgccacagtttagaagtgacagaaac
ctactgctcacagttttagagccgggaaatcctaggtcaaggcagtatta
gaagtaatgtctagggagggctggtttgctggctcttcggttgtcttctc
tgtgtcccatcctctcttggttgtagtttggaagactcattcataaggac
ttcccccctcattccgcaaatgctcagtctacctcctaatgccttcacat
tgggggctagagtctcaaggtaggaatttgtaggcgcacagatatcgaac
catagtgttgcttcttagccttttggccaggtacagaccacacacctgtg
tactgctgtgacttctggctttgatctttaatcctagtgacatacattac
ttctgggaccagtcacaggtttgtcaccccctttgatttactggtgaaac
tgaggtagaaatacctaaggaggtattaaggaatggttgtatttaaaggt
ttctgttttgttttcttgtttttcaagtggattgttattaattattttag
gttaatgttaagcaacgaataagatagtcacaaatccaagtatatgtgga
cagaattaggtttatatctgcccattttttaaaggtaataagatatatgt
aacatgaaatttcccatcttatccagtcttatgcccagttatatgaagta
ttattcataatgggttactgtcagctaccacctagctctgatttccacag
tcgtgaccaacagttgccccggcttctctttgcgcattctatcttctaga
cttcacaattgtgaatccaactctgaggtctgcatgatgtagttcccttc
tgaaagccttctttctcccttcatccattgac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_21955445_21955721
seq2: B6Ng01-263L15.b_52_328 (reverse)

seq1  CCACCCCACCCCAGATCACATTTACCCTACACTACCCTGTTTCTGTGACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCCCACCCCAGATCACATTTACCCTACACTACCCTGTTTCTGTGACT  50

seq1  TTCTACATATTCAAAACCTTTTGATTGAATGTCAGAGCATATTGAAATAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTACATATTCAAAACCTTTTGATTGAATGTCAGAGCATATTGAAATAT  100

seq1  TTTCAGAAACACCTAAGCAACAGTTAATGTCAATACCATAGACCTAGTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGAAACACCTAAGCAACAGTTAATGTCAATACCATAGACCTAGTTT  150

seq1  GAAAAGACTTTAAAGTGATGTTGAACTTCATTGTGACCAGGTAAGAAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAGACTTTAAAGTGATGTTGAACTTCATTGTGACCAGGTAAGAAGAT  200

seq1  GGGTGCAGAGGCTCCTCCATCTTGTTTTCTTGCTGGGGCCATGTCTGGGT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGCAGAGGCTCCTCCATCTTGTTTTCTTGCTGGGGCCATGTCTGGGT  250

seq1  TAACTATAATTTGATCTCCTTGATGGA  277
      |||||||||||||||||||||||||||
seq2  TAACTATAATTTGATCTCCTTGATGGA  277

seq1: chr19_21922305_21923432
seq2: B6Ng01-263L15.g_66_1197

seq1  GAATTCCAGGTCATGAAGTAGGTGTAAAAAGTTCAGATAAAGGAATGGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGTCATGAAGTAGGTGTAAAAAGTTCAGATAAAGGAATGGTC  50

seq1  ACTTGGTATGTTTTCAGTGACCTGTGGGCATGGATACAGTTGCCTTCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTGGTATGTTTTCAGTGACCTGTGGGCATGGATACAGTTGCCTTCAAA  100

seq1  GTTGCAATGTGTTCTTGTCTAGATGGTGTTTACCAGTGACCCTCACAAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGCAATGTGTTCTTGTCTAGATGGTGTTTACCAGTGACCCTCACAAAA  150

seq1  GCTACCTCCCTGTACGATTCCAGTCACCTGGGAAAGCAGAAATTCAGCGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACCTCCCTGTACGATTCCAGTCACCTGGGAAAGCAGAAATTCAGCGA  200

seq1  GGAGATCCATCCATTATTTCCGTAAGTACAGTCTGGTGTGGCCCCAGTCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATCCATCCATTATTTCCGTAAGTACAGTCTGGTGTGGCCCCAGTCT  250

seq1  TTTGGGGGCTGCTGTAAGAGAAATTGCCACAGTTTAGAAGTGACAGAAAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGGGCTGCTGTAAGAGAAATTGCCACAGTTTAGAAGTGACAGAAAC  300

seq1  CTACTGCTCACAGTTTTAGAGCCGGGAAATCCTAGGTCAAGGCAGTATTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGCTCACAGTTTTAGAGCCGGGAAATCCTAGGTCAAGGCAGTATTA  350

seq1  GAAGTAATGTCTAGGGAGGGCTGGTTTGCTGGCTCTTCGGTTGTCTTCTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTAATGTCTAGGGAGGGCTGGTTTGCTGGCTCTTCGGTTGTCTTCTC  400

seq1  TGTGTCCCATCCTCTCTTGGTTGTAGTTTGGAAGACTCATTCATAAGGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGTCCCATCCTCTCTTGGTTGTAGTTTGGAAGACTCATTCATAAGGAC  450

seq1  TTCCCCCCTCATTCCGCAAATGCTCAGTCTACCTCCTAATGCCTTCACAT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCCTCATTCCGCAAATGCTCAGTCTACCTCCTAATGCCTTCACAT  500

seq1  TGGGGGCTAGAGTCTCAAGGTAGGAATTTGTAGGCGCACAGATATCGAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGGGCTAGAGTCTCAAGGTAGGAATTTGTAGGCGCACAGATATCGAAC  550

seq1  CATAGTGTTGCTTCTTAGCCTTTTGGCCAGGTACAGACCACACACCTGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGTGTTGCTTCTTAGCCTTTTGGCCAGGTACAGACCACACACCTGTG  600

seq1  TACTGCTGTGACTTCTGGCTTTGATCTTTAATCCTAGTGACATACATTAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGCTGTGACTTCTGGCTTTGATCTTTAATCCTAGTGACATACATTAC  650

seq1  TTCTGGGACCAGTCACAGGTTTGTCACCCCCTTTGATTTACTGGTGAAAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGGACCAGTCACAGGTTTGTCACCCCCTTTGATTTACTGGTGAAAC  700

seq1  TGAGGTAGAAATACCTAAGGAGGTATTAAGGAATGGTTGTATTTAAAGGT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGGTAGAAATACCTAAGGAGGTATTAAGGAATGGTTGTATTTAAAGGT  750

seq1  TTCTGTTTTGTTTTCTTGTTTTTCAAGTGGATTGTTATTAATTATTTTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGTTTTGTTTTCTTGTTTTTCAAGTGGATTGTTATTAATTATTTTAG  800

seq1  GTTAATGTTAAGCAACGAATAAGATAGTCACAAATCCAAGTATATGTGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAATGTTAAGCAACGAATAAGATAGTCACAAATCCAAGTATATGTGGA  850

seq1  CAGAATTAGGTTTATATCTGCCCATTTTTT-AAGGTAATAAGATATATGT  899
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  CAGAATTAGGTTTATATCTGCCCATTTTTTAAAGGTAATAAGATATATGT  900

seq1  AACATGAAATTTCCCATCTTATCCAGTCTTATGCCCAGTTATATGAAGTA  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACATGAAATTTCCCATCTTATCCAGTCTTATGCCCAGTTATATGAAGTA  950

seq1  -TATTCATAATGGGTTACTGTCAGCTACCACCTAGCTCTGATTTCCACAG  998
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTCATAATGGGTTACTGTCAGCTACCACCTAGCTCTGATTTCCACAG  1000

seq1  TCGTGACCAACAGTTG-CCCGGCTTCTCTTTGCGCA-TCTATC-TCTAGA  1045
      |||||||||||||||| ||||||||||||||||||| |||||| ||||||
seq2  TCGTGACCAACAGTTGCCCCGGCTTCTCTTTGCGCATTCTATCTTCTAGA  1050

seq1  ACTTTCAC-ATTGTG-ATCCAACTCTGAGGTCTTGGCATGGTGTTAGTCC  1093
         ||||| |||||| |||||||||||||||||  ||||| |||   |||
seq2  --CTTCACAATTGTGAATCCAACTCTGAGGTCT--GCATGATGTAGTTCC  1096

seq1  CTTCTGAAAG-CTTCTTTCTCCCTCCATTCATTGAC  1128
      |||||||||| ||||||||||||| ||| |||||||
seq2  CTTCTGAAAGCCTTCTTTCTCCCTTCATCCATTGAC  1132