BAC Information

Click to search

BAC

Clone NameB6Ng01-264F04
Chromosome19 (Build37)
Map Location 51,784,946 - 51,786,090
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042924, LOC100042928
Downstream geneLOC668536, LOC100042936, Ins1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-264F04.bB6Ng01-264F04.g
ACCGA068256GA068257
length1,1331,178
definitionB6Ng01-264F04.b B6Ng01-264F04.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaagggattccagaaaaactttgccctatggataatcaaagatt
actaggttggaaactacatgcttttctagcgttctgggtgcaatacaggt
aaacatctccttcctttgaagagccaaccctatgtgtttacattccctag
cttctctggtgcttatccgtatgtacaagcatctcttgctctccacaatt
tcatttacattattccccctttgctgtgcagaatcagcactatttatcag
aaacaaacctttatcattatgaattattttgtttttatactcattctttc
ccctaactacttctccttccatattttcatttaccacttagtattttatt
attttaacactgctttaactcgatgctttccaagtatggtttttatatgt
aaagccacattttgaaagtaaaataaagaatcttgtcttcagagtacaaa
gtttttgtttcttcaaaattcctccttcttaaatttagaagagaaagtca
tgattgtaaatctgcttgaatgtcacaaacaagttacaaatcagtatctt
gggtctgtagagatgcttcagcactaaaaagcaccatgctcttccagata
acctgaagaatttgggtctgagtatctatgttggtatttcccagtatcct
gtaaacccagcttcaggaaatttgatatcctttactggtctctgtgggcc
cctgctcacatgcagtatacacccacactggctcaactgaaatgaaaact
catacacactggtgatttcacagatagtgaattagagaaatgaggagaag
ggaaaggtgtgataaaagcaataaaataacaatacataatttgatataat
tatctcttgtttctcattatttcagtaaatcacattaagaaataaatttc
cagttttatgtggaggtccttgatccacttagacgtgagctttgtacaag
gtgatagaattgatcaactctcattctttggcatgctaactgccacttga
acaggacatttgctgaatatgctgtctttttccactggatggttttggct
tctttgtcaagatcatgtacaatagtacgtgggtttattatctggatctt
cattctatcaatgaatctacggctgtgttctat

gaattctaaacggaggaatactgaatggttgagaagcacctgaaaaaata
ttcaacatccttaatcattagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcaaggatgtggagaaataggaacactcctctattattggtg
ggattgcaagcttgtacaaccactctggaaatcagtctggcagttcctca
gaaaattggacatagtactactggaagatttagcaaaactttttctgggc
atatacccagaatatgttccaacttgtaataaggacacatgctccactat
gttcatagcagcctcatttataatagccagaagctgaaatgaacccagat
gcccctcaatagaggaatggatacagaatatgtggtacatttacacaatg
aagtactactcatctattaaaaacaatgaatttatgaaatgcttaggcaa
atggatggatctggaggatatcatcctgagtgaggtaacctaatcacaaa
agaacacacatagtatgcactcactgataagtggatattagcccagaaac
ttagaatacccaagatacaatttgcaaaacacatgaaactcaagaataag
ggagaccaaagtgtggatactttgttccttcttagaatggggaacaaaat
acccatggaaggtgttatagatacaaagttcttgcctgagacagaaggaa
ggaccatccagaatctgccccatccagggacccatcccataaacaaccca
tcaaaaccagacactactgcatatgccagcaagattttgctaataggacc
ctgatatagctctctcttgtgaggctattccagtgcctggcaaatacaga
agtggatgctcacagtcatctattggatggaacacagggcccctaatgga
ggagccagaaaagtacccaagagctgaagggtctgcaacccttattagag
aacaaaatatgacttaccagtacccctgagagattgtgtctctagttgca
tatgtagcagagatgcctagttcgcatcatgcagaaagtccttgtctgca
gatatatgccagtacagaagagccagtcagattggcactggctcggctcg
gtaactatgctctttgtgatcagacggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr19_51784946_51786090
seq2: B6Ng01-264F04.b_45_1177 (reverse)

seq1  ATAG-ACACAGCCCGGTAGATCAATGGAATAGAATTGAAGACCCAGAAAT  49
      |||| ||||||||  ||||||  || | |||||| |||||| ||||  ||
seq2  ATAGAACACAGCC--GTAGATTCATTG-ATAGAA-TGAAGATCCAG--AT  44

seq1  AATAAACCCACGTACCTATGGTTACATGATCTTTGACAAAGAAGCCAAAA  99
      |||||||||||||| |||| | ||||||||| ||||||||||||||||||
seq2  AATAAACCCACGTA-CTATTG-TACATGATC-TTGACAAAGAAGCCAAAA  91

seq1  CCATCCAGTGGAAAAAAGACAGCATATTCAGCAAATTGTCCTGGTTCAAG  149
      ||||||||||| ||||||||||||||||||||||| |||||| |||||||
seq2  CCATCCAGTGG-AAAAAGACAGCATATTCAGCAAA-TGTCCT-GTTCAAG  138

seq1  TGGCAGTTAGCATGCCAAAGAATGAGAGTTGATCAATTCTTATCACCTTG  199
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  TGGCAGTTAGCATGCCAAAGAATGAGAGTTGATCAATTC-TATCACCTTG  187

seq1  TACAAAGCTCACGTCTAAGTGGATCAAGGACCTCCACATAAAACTGGAAA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCTCACGTCTAAGTGGATCAAGGACCTCCACATAAAACTGGAAA  237

seq1  TTTATTTCTTAATGTGATTTACTGAAATAATGAGAAACAAGAGATAATTA  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTTCTTAATGTGATTTACTGAAATAATGAGAAACAAGAGATAATTA  287

seq1  TATCAAATTATGTATTGTTATTTTATTGCTTTTATCACACCTTTCCCTTC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCAAATTATGTATTGTTATTTTATTGCTTTTATCACACCTTTCCCTTC  337

seq1  TCCTCATTTCTCTAATTCACTATCTGTGAAATCACCAGTGTGTATGAGTT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCATTTCTCTAATTCACTATCTGTGAAATCACCAGTGTGTATGAGTT  387

seq1  TTCATTTCAGTTGAGCCAGTGTGGGTGTATACTGCATGTGAGCAGGGGCC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTTCAGTTGAGCCAGTGTGGGTGTATACTGCATGTGAGCAGGGGCC  437

seq1  CACAGAGACCAGTAAAGGATATCAAATTTCCTGAAGCTGGGTTTACAGGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGAGACCAGTAAAGGATATCAAATTTCCTGAAGCTGGGTTTACAGGA  487

seq1  TACTGGGAAATACCAACATAGATACTCAGACCCAAATTCTTCAGGTTATC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGGGAAATACCAACATAGATACTCAGACCCAAATTCTTCAGGTTATC  537

seq1  TGGAAGAGCATGGTGCTTTTTAGTGCTGAAGCATCTCTACAGACCCAAGA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAAGAGCATGGTGCTTTTTAGTGCTGAAGCATCTCTACAGACCCAAGA  587

seq1  TACTGATTTGTAACTTGTTTGTGACATTCAAGCAGATTTACAATCATGAC  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGATTTGTAACTTGTTTGTGACATTCAAGCAGATTTACAATCATGAC  637

seq1  TTTCTCTTCTAAATTTAAGAAGGAGGAATTTTGAAGAAACAAAAACTTTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTCTTCTAAATTTAAGAAGGAGGAATTTTGAAGAAACAAAAACTTTG  687

seq1  TACTCTGAAGACAAGATTCTTTATTTTACTTTCAAAATGTGGCTTTACAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTGAAGACAAGATTCTTTATTTTACTTTCAAAATGTGGCTTTACAT  737

seq1  ATAAAAACCATACTTGGAAAGCATCGAGTTAAAGCAGTGTTAAAATAATA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAAACCATACTTGGAAAGCATCGAGTTAAAGCAGTGTTAAAATAATA  787

seq1  AAATACTAAGTGGTAAATGAAAATATGGAAGGAGAAGTAGTTAGGGGAAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATACTAAGTGGTAAATGAAAATATGGAAGGAGAAGTAGTTAGGGGAAA  837

seq1  GAATGAGTATAAAAACAAAATAATTCATAATGATAAAGGTTTGTTTCTGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATGAGTATAAAAACAAAATAATTCATAATGATAAAGGTTTGTTTCTGA  887

seq1  TAAATAGTGCTGATTCTGCACAGCAAAGGGGGAATAATGTAAATGAAATT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATAGTGCTGATTCTGCACAGCAAAGGGGGAATAATGTAAATGAAATT  937

seq1  GTGGAGAGCAAGAGATGCTTGTACATACGGATAAGCACCAGAGAAGCTAG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGAGAGCAAGAGATGCTTGTACATACGGATAAGCACCAGAGAAGCTAG  987

seq1  GGAATGTAAACACATAGGGTTGGCTCTTCAAAGGAAGGAGATGTTTACCT  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATGTAAACACATAGGGTTGGCTCTTCAAAGGAAGGAGATGTTTACCT  1037

seq1  GTATTGCACCCAGAACGCTAGAAAAGCATGTAGTTTCCAACCTAGTAATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATTGCACCCAGAACGCTAGAAAAGCATGTAGTTTCCAACCTAGTAATC  1087

seq1  TTTGATTATCCATAGGGCAAAGTTTTTCTGGAATCCCTTAGAATTC  1145
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGATTATCCATAGGGCAAAGTTTTTCTGGAATCCCTTAGAATTC  1133


| Home | SequenceCutter | Blast | Download |